BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019429
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    49   2e-10
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              54   7e-10
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    49   9e-10
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    48   9e-10
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            54   1e-09

>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 48.5 bits (114), Expect(2) = 2e-10
 Identities = 21/51 (41%), Positives = 27/51 (52%)
 Frame = +2

Query: 140 LKTLQ*LKQWNFIASDVCVLCNRGVETEEHLFFSCIYGREIWTGLLHRAGY 292
           L T   L+ W  I    CVLCN   ET +HLFF+C +   IWT  +   G+
Sbjct: 607 LHTRDRLRSWGLIVPAECVLCNLVDETRDHLFFACRFSSRIWTFFMRAVGF 657



 Score = 41.6 bits (96), Expect(2) = 2e-10
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +1

Query: 52  VSWHKLIWFTNKIPMLSFISWL 117
           VSWHK +WFTN++P  +FISW+
Sbjct: 580 VSWHKAVWFTNQVPKHAFISWV 601


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 53.9 bits (128), Expect(2) = 7e-10
 Identities = 24/49 (48%), Positives = 29/49 (59%)
 Frame = +2

Query: 128 LRDGLKTLQ*LKQWNFIASDVCVLCNRGVETEEHLFFSCIYGREIWTGL 274
           +++ L T   + QWN   S  CVLCN  +ET  HLFFSC Y  EIW  L
Sbjct: 507 VQNRLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCYTAEIWENL 555



 Score = 34.3 bits (77), Expect(2) = 7e-10
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 34  RQSKQ*VSWHKLIWFTNKIPMLSFISWLALR 126
           R +   V+WH  IWF +  P  SF +WLA++
Sbjct: 478 RNTSTPVTWHMGIWFAHATPKFSFCAWLAVQ 508


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 48.9 bits (115), Expect(2) = 9e-10
 Identities = 23/72 (31%), Positives = 33/72 (45%)
 Frame = +2

Query: 128  LRDGLKTLQ*LKQWNFIASDVCVLCNRGVETEEHLFFSCIYGREIWTGLLHRAGYNRVLQ 307
            +R+ L T   +  WN      CV C+  +ET +HLFF C Y  EIWT +     Y     
Sbjct: 799  IRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAKNV-YKDRFS 857

Query: 308  QTWQQDLEWLLD 343
              W   + ++ D
Sbjct: 858  TKWSAVVNYISD 869



 Score = 38.9 bits (89), Expect(2) = 9e-10
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +1

Query: 10  YSTKSF--RIRQSKQ*VSWHKLIWFTNKIPMLSFISWLALR 126
           +STK     IR S    +WHK +WF +  P  SF +WLA+R
Sbjct: 760 FSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIR 800


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 48.1 bits (113), Expect(2) = 9e-10
 Identities = 24/72 (33%), Positives = 37/72 (51%)
 Frame = +2

Query: 128 LRDGLKTLQ*LKQWNFIASDVCVLCNRGVETEEHLFFSCIYGREIWTGLLHRAGYNRVLQ 307
           LR+ L T   ++ WN  +   C  C+  +ET +HLFFSC Y   IWT +        VLQ
Sbjct: 483 LRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFSCSYASAIWTAIA-----KNVLQ 537

Query: 308 QTWQQDLEWLLD 343
             +  D + +++
Sbjct: 538 HRFSTDWQTIVN 549



 Score = 39.7 bits (91), Expect(2) = 9e-10
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = +1

Query: 7   SYSTKSF--RIRQSKQ*VSWHKLIWFTNKIPMLSFISWLALR 126
           S+STK    ++R+    V+W+K +WF++  P   F +WLALR
Sbjct: 443 SFSTKDTWNQVRKKSNEVAWYKGVWFSHSTPKYQFCTWLALR 484


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 53.5 bits (127), Expect(2) = 1e-09
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = +2

Query: 128 LRDGLKTLQ*LKQWNFIASDVCVLCNRGVETEEHLFFSCIYGREIWTGLLHRAGYNRVLQ 307
           +++ L T   +  WN  A   CVLC+  VET +HLFF+C Y  E+W+ L  +   ++   
Sbjct: 333 IKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFTCPYSAEVWSTLTRKL-LSQHFT 391

Query: 308 QTWQQDLEWLLDKSKG 355
             W+  L+ L +KS G
Sbjct: 392 NRWEAILKLLTNKSLG 407



 Score = 33.9 bits (76), Expect(2) = 1e-09
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +1

Query: 34  RQSKQ*VSWHKLIWFTNKIPMLSFISWLALR 126
           R+ K  V+W+K +WF++  P  S ++W+A++
Sbjct: 304 REPKLKVNWYKGVWFSHATPKYSVLAWIAIK 334