BLASTX nr result

ID: Coptis21_contig00019419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019419
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49
emb|CBI30224.3| unnamed protein product [Vitis vinifera]              194   6e-48
ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ...   194   6e-48
ref|XP_003590389.1| 3-deoxy-D-manno-octulosonic-acid transferase...   183   1e-44
gb|ABE80128.2| Three-deoxy-D-manno-octulosonic-acid transferase,...   183   1e-44

>ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|222867530|gb|EEF04661.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  198 bits (504), Expect = 3e-49
 Identities = 100/136 (73%), Positives = 110/136 (80%)
 Frame = -1

Query: 410 QLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEGID 231
           QL +R VWMASSIH GEEEVMLGVHK L Q++PD+VTIIVPR+P          QKEG  
Sbjct: 241 QLGHRKVWMASSIHRGEEEVMLGVHKVLKQVYPDLVTIIVPRYPQHGKDIAQKLQKEGQH 300

Query: 230 VALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGCAV 51
           VALRS+  +I P  NIY+VDTLGELR LYRLTPIAVIGGSF PGLAGHN+SEAAAAGCAV
Sbjct: 301 VALRSQHQRIVPGRNIYVVDTLGELRHLYRLTPIAVIGGSFFPGLAGHNISEAAAAGCAV 360

Query: 50  LTGYHVGHFSHMVFAM 3
           LTGYHVGHFSHM+  M
Sbjct: 361 LTGYHVGHFSHMLREM 376


>emb|CBI30224.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score =  194 bits (493), Expect = 6e-48
 Identities = 98/136 (72%), Positives = 110/136 (80%)
 Frame = -1

Query: 410 QLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEGID 231
           QLA+R VWM SSIH GEEEVMLGVHK LM++ PDMVTIIVPR+P          QKEG+ 
Sbjct: 240 QLAHRRVWMVSSIHRGEEEVMLGVHKVLMRMHPDMVTIIVPRYPQHGREIAIELQKEGLS 299

Query: 230 VALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGCAV 51
           VALRSRD+K+   ++IY+VDTLGELR  Y LTPIAVIGGSFLPGL GHN+SEAAAAGCAV
Sbjct: 300 VALRSRDEKLVSGTSIYVVDTLGELRHFYTLTPIAVIGGSFLPGLTGHNISEAAAAGCAV 359

Query: 50  LTGYHVGHFSHMVFAM 3
           LTG+HVGHFS MV  M
Sbjct: 360 LTGHHVGHFSDMVLKM 375


>ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase [Vitis
           vinifera]
          Length = 441

 Score =  194 bits (493), Expect = 6e-48
 Identities = 98/136 (72%), Positives = 110/136 (80%)
 Frame = -1

Query: 410 QLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEGID 231
           QLA+R VWM SSIH GEEEVMLGVHK LM++ PDMVTIIVPR+P          QKEG+ 
Sbjct: 240 QLAHRRVWMVSSIHRGEEEVMLGVHKVLMRMHPDMVTIIVPRYPQHGREIAIELQKEGLS 299

Query: 230 VALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGCAV 51
           VALRSRD+K+   ++IY+VDTLGELR  Y LTPIAVIGGSFLPGL GHN+SEAAAAGCAV
Sbjct: 300 VALRSRDEKLVSGTSIYVVDTLGELRHFYTLTPIAVIGGSFLPGLTGHNISEAAAAGCAV 359

Query: 50  LTGYHVGHFSHMVFAM 3
           LTG+HVGHFS MV  M
Sbjct: 360 LTGHHVGHFSDMVLKM 375


>ref|XP_003590389.1| 3-deoxy-D-manno-octulosonic-acid transferase [Medicago truncatula]
           gi|355479437|gb|AES60640.1|
           3-deoxy-D-manno-octulosonic-acid transferase [Medicago
           truncatula]
          Length = 510

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/136 (63%), Positives = 108/136 (79%)
 Frame = -1

Query: 410 QLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEGID 231
           QL+++ VWMASSIH GEEE++ GVH  LMQ+ P+++TIIVPRHP          +++G  
Sbjct: 238 QLSHKQVWMASSIHRGEEEIISGVHNVLMQLRPNIMTIIVPRHPQQGREIAKKLERQGHY 297

Query: 230 VALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGCAV 51
           V LRS+ ++  P +NIY+VDTLGELR +Y LTPIAVIGGSFLPGL+GHN+SEAAAAGCA+
Sbjct: 298 VVLRSQHERFKPETNIYVVDTLGELRQMYTLTPIAVIGGSFLPGLSGHNISEAAAAGCAI 357

Query: 50  LTGYHVGHFSHMVFAM 3
           LTG HVGHFSHMV  M
Sbjct: 358 LTGRHVGHFSHMVLEM 373


>gb|ABE80128.2| Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal
           [Medicago truncatula]
          Length = 470

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/136 (63%), Positives = 108/136 (79%)
 Frame = -1

Query: 410 QLANRPVWMASSIHEGEEEVMLGVHKELMQIFPDMVTIIVPRHPXXXXXXXXXXQKEGID 231
           QL+++ VWMASSIH GEEE++ GVH  LMQ+ P+++TIIVPRHP          +++G  
Sbjct: 238 QLSHKQVWMASSIHRGEEEIISGVHNVLMQLRPNIMTIIVPRHPQQGREIAKKLERQGHY 297

Query: 230 VALRSRDDKISPHSNIYLVDTLGELRSLYRLTPIAVIGGSFLPGLAGHNLSEAAAAGCAV 51
           V LRS+ ++  P +NIY+VDTLGELR +Y LTPIAVIGGSFLPGL+GHN+SEAAAAGCA+
Sbjct: 298 VVLRSQHERFKPETNIYVVDTLGELRQMYTLTPIAVIGGSFLPGLSGHNISEAAAAGCAI 357

Query: 50  LTGYHVGHFSHMVFAM 3
           LTG HVGHFSHMV  M
Sbjct: 358 LTGRHVGHFSHMVLEM 373


Top