BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019412
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26396.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002525669.1| pentatricopeptide repeat-containing protein,...    86   4e-15
ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|NP_001046824.1| Os02g0468800 [Oryza sativa Japonica Group] g...    81   1e-13

>emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 4/93 (4%)
 Frame = +2

Query: 2   CAKLRSLRDGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPS 181
           CAKL SL D  K+H+H LLTGF  H+FVQTAL+D+YSKC C      ++RL+FD+MP+ S
Sbjct: 38  CAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCC----FHSARLVFDQMPIKS 93

Query: 182 LVSWNSILSAYSN----HESFLLFRRMQLLRVE 268
           LVSWNSI+SA+       +SF + ++MQLL +E
Sbjct: 94  LVSWNSIISAHCRDFHIDQSFGILKQMQLLGLE 126



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
 Frame = +2

Query: 2   CAKLRSLRDGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPS 181
           CA++ SLR G++I  + LL G    L VQT+L+ M+    C+CG +  ++ LF+ +P   
Sbjct: 337 CAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMF----CKCGSIKKAQALFERIPNKD 392

Query: 182 LVSWNSILSAYSNH----ESFLLFRRMQ 253
           L  W+++++ Y+ H    E+  LF +MQ
Sbjct: 393 LAVWSAMINGYAVHGMGKEALNLFHKMQ 420


>ref|XP_002525669.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535105|gb|EEF36787.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 494

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   CAKLRSLRDGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPS 181
           C+   S+RDG KIH+H +  GF QH+FV T LLDMYSKC      +++SR +FDEMP+ S
Sbjct: 60  CSNTNSIRDGTKIHSHLIQLGF-QHVFVMTTLLDMYSKCY----DLASSRKVFDEMPMRS 114

Query: 182 LVSWNSILSAYSN----HESFLLFRRMQLLRVEP 271
            VSWNSI+SAY       E+  + ++M+L+   P
Sbjct: 115 TVSWNSIISAYCRFFLVDEAISMLQKMRLIGFVP 148



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
 Frame = +2

Query: 2   CAKLRSLRDGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPS 181
           CA L SL  G++I  + L  G H  + VQT+L+ M+    C+CG +  ++ +F+ +    
Sbjct: 359 CADLGSLSMGEEIEEYILANGLHSSVQVQTSLIHMF----CRCGSLEKAKAVFERLATKD 414

Query: 182 LVSWNSILSAYSNH----ESFLLFRRMQ 253
           L +W+S+++ Y+ H    E+F LF +MQ
Sbjct: 415 LAAWSSMINGYAIHGMAEEAFSLFHKMQ 442


>ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 598

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
 Frame = +2

Query: 2   CAKLRSLRDGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPS 181
           CA LR  R G  +HAHALL G    +FV T+LLDMY+KC C    +  +R LFDEMP P+
Sbjct: 55  CAALRLPRLGCSVHAHALLVGAASDVFVLTSLLDMYAKCAC----LPDARRLFDEMPSPT 110

Query: 182 LVSWNSILSAYSNH----ESFLLFRRMQLLRVEPN 274
           L+SWN +++AYS      E+  +F  M+ + V P+
Sbjct: 111 LISWNCMVTAYSKSSCVTEAVAMFNTMRGVGVRPS 145


>ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   CAKLRSLRDGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPS 181
           CA L S++ G  +H H L  GF    FVQTAL+DMYSK    C  V+++R +FDEMP  S
Sbjct: 56  CANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSK----CSHVASARQVFDEMPQRS 111

Query: 182 LVSWNSILSAYSNHES----FLLFRRMQLLRVEP 271
           +VSWN+++SAYS   S      L + M +L  EP
Sbjct: 112 VVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEP 145


>ref|NP_001046824.1| Os02g0468800 [Oryza sativa Japonica Group]
           gi|47497329|dbj|BAD19370.1| selenium binding
           protein-like protein [Oryza sativa Japonica Group]
           gi|113536355|dbj|BAF08738.1| Os02g0468800 [Oryza sativa
           Japonica Group] gi|125582005|gb|EAZ22936.1| hypothetical
           protein OsJ_06625 [Oryza sativa Japonica Group]
          Length = 603

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
 Frame = +2

Query: 2   CAKLRSLRDGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPS 181
           CA LR  R G  +HAHALL G    +FV+T+LLDMY+K    CG +  +R LFDEMP P+
Sbjct: 62  CAALRLPRLGAAVHAHALLAGAASAVFVRTSLLDMYAK----CGRLPDARRLFDEMPRPT 117

Query: 182 LVSWNSILSAYSN----HESFLLFRRMQLLRVEPN 274
           LVSWN +++AY       ES  +F  M+   V P+
Sbjct: 118 LVSWNCMVAAYGRSSQVEESVAVFNAMRRAGVRPS 152