BLASTX nr result

ID: Coptis21_contig00019410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019410
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520702.1| conserved hypothetical protein [Ricinus comm...    65   1e-08
ref|XP_002320378.1| predicted protein [Populus trichocarpa] gi|2...    63   6e-08
ref|XP_002302818.1| predicted protein [Populus trichocarpa] gi|2...    57   6e-06

>ref|XP_002520702.1| conserved hypothetical protein [Ricinus communis]
           gi|223540087|gb|EEF41664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 151

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 25/167 (14%)
 Frame = +3

Query: 186 EMDLRYVIDVSSFFVVESSGDSEVDLDPIISTGCKNIALA---ENDAASC-CD------- 332
           +MD +  +D+SS F+VE+SGDSEV LDP      K++A A    +DA SC CD       
Sbjct: 11  QMDTKKRVDLSSCFLVEASGDSEVGLDP------KDLAAAPDDNDDAESCSCDVSDCYYY 64

Query: 333 --------------EYDVASMDDYVDIELQENNKEDCYHDNKVNYGSHIFGDGNWTCQKM 470
                         E  V  + D+   + QE+  ED   D   +Y + + G  N     +
Sbjct: 65  YSCVGDNTNSGEVEEASVHGVTDHNKEQYQEHEDED--EDEVQSYRTWVDGHIN----GV 118

Query: 471 DFSYQSCISIETTEHEHEKQPKGGADVSEELMNEEEKSRLFWDTCLA 611
             + +SC+S+E+T                E MNE+E++RLFW++CLA
Sbjct: 119 QVNKKSCVSVEST---------------SEPMNEKERNRLFWESCLA 150


>ref|XP_002320378.1| predicted protein [Populus trichocarpa] gi|222861151|gb|EEE98693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
 Frame = +3

Query: 207 IDVSSFFVVESSGDSEVDLDPIISTGCKNIALAENDAASC-CDEYDVASMDDYV-----D 368
           +DVS F +VE++GDSEVD DP +ST   ++   ++DA SC CD  D + + D +     +
Sbjct: 8   VDVSPFLLVEAAGDSEVDSDPTMST--IDLVDDDDDAESCSCDTSDHSCVSDIIKGACSE 65

Query: 369 IELQENNKEDCYHDNKVNYGSHIFGDGNWTCQK--------MDFSYQSCISIETTEHEHE 524
           +E  + N      D+          +G   CQ         +    +SC+S+        
Sbjct: 66  VEAYQVNYNVVDDDDDEEEEE----EGVEVCQSWVHHVHVGLPVKQKSCVSV-------- 113

Query: 525 KQPKGGADVSEELMNEEEKSRLFWDTCLA 611
                  D S E MNE+EK RLFW+ CLA
Sbjct: 114 -------DSSNESMNEKEKDRLFWEACLA 135


>ref|XP_002302818.1| predicted protein [Populus trichocarpa] gi|222844544|gb|EEE82091.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
 Frame = +3

Query: 207 IDVSSFFVVESSGDSEVDLDPIISTGCKNIALAENDAASC-CD----------------- 332
           +DVSSF +VE++GDSEVD DP + T    +   + DA SC CD                 
Sbjct: 8   VDVSSFLLVEATGDSEVDSDPNM-TIIDLVDDDDGDAESCSCDTSYHSCVNGVYSEVEEY 66

Query: 333 --EYDVASMDDYVDIELQENNKEDCYHDNKVNYGSHIFGDG-NWTCQKMDFSYQSCISIE 503
              Y+V   + +   + Q+  +E+   + +   G H++    +     +    +SC+S+ 
Sbjct: 67  HVNYNVVDEEQHQHQQQQQEEEEEEEEEQQQEKGVHVYQSRVDHGHAGLPVKQKSCVSV- 125

Query: 504 TTEHEHEKQPKGGADVSEELMNEEEKSRLFWDTCLA 611
                         D + E MNE+E+++LFW+ CLA
Sbjct: 126 --------------DSANESMNEKEENKLFWEACLA 147


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