BLASTX nr result
ID: Coptis21_contig00019405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00019405
(1985 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21659.3| unnamed protein product [Vitis vinifera] 558 e-156
ref|XP_002272046.2| PREDICTED: DDT domain-containing protein DDB... 551 e-154
ref|XP_002325278.1| nucleosome/chromatin assembly factor group [... 489 e-135
ref|XP_004147319.1| PREDICTED: DDT domain-containing protein DDB... 480 e-133
ref|XP_003532375.1| PREDICTED: DDT domain-containing protein DDB... 471 e-130
>emb|CBI21659.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 558 bits (1437), Expect = e-156
Identities = 306/577 (53%), Positives = 377/577 (65%), Gaps = 39/577 (6%)
Frame = +2
Query: 2 KDQSVCPCKILKVLGDAE-KSSYEVGWIDKDKNVIDHSVVRAEDLIRKKLPFTREVLKSF 178
+D V C+I+KVL + + K+ YEV W+DKDK I +VV AEDLIRKKLPFTREVLKSF
Sbjct: 125 RDDCVSLCQIIKVLEEGDNKTRYEVAWLDKDKKRIGTAVVNAEDLIRKKLPFTREVLKSF 184
Query: 179 IRESTSRSFPWILHEKLARQYGVSTEVPEELQ---------------------------D 277
IREST R+ PW+LH+K A+++ +ST+ PEE++ +
Sbjct: 185 IRESTYRNVPWVLHDKWAQEHAISTDPPEEIRSKYFFKDGHLVINKKKRKTEDDKQNITE 244
Query: 278 XXXXXXXXXXXXFETENSHG-----SXXXXXEDEPAEPIKYPIDDLLVQPDADDPVLTDR 442
E E S G S + EPI YPIDDLLV+P DDPV TDR
Sbjct: 245 TRNGQVGKSKNKLEREKSEGLVMERSAEKEDFEPKEEPINYPIDDLLVRPGPDDPVFTDR 304
Query: 443 PTPSRDFNVPMDCVGDLLMVWDFCSSFSKLLQLSPFSLEDFQNAICHKDNNLILIVESHA 622
P+PSRDF VPMDCVGDLLMVWDF SSF +LL L PFSL+DF+NAICHKD+NLI+IVE+H+
Sbjct: 305 PSPSRDFTVPMDCVGDLLMVWDFVSSFGRLLHLFPFSLQDFENAICHKDSNLIIIVETHS 364
Query: 623 AVLRLLIKERGEYFTAIHNKNRSGTITVINWTNYVCDFLEMVDVPELSTNIATIKRSQYG 802
A+LRLL+K+ G+YFTAI K R IT+I WT Y+CDFLEMV++PELS+ I TIKR YG
Sbjct: 365 ALLRLLVKDDGQYFTAIQEKKRKPKITIITWTEYLCDFLEMVEMPELSSCIPTIKRGHYG 424
Query: 803 ILETHAKLGIFRELVSQALASDAVRELLDTLIEQQQALAATXXXXXXXXXXXXXXXXXLQ 982
+LETHAKLGIFREL++Q LA+D VR+ LD IE++Q LAAT
Sbjct: 425 LLETHAKLGIFRELIAQTLATDLVRKKLDEYIEERQTLAATKRGEAIEEGRKKREEKERL 484
Query: 983 KAVS-GTKEITGRILQENGGGHLHIQENGEGNRQNGHVAKDI-----SGKRKSKSVNMEA 1144
KA S +E G L+ N N +G + + D+ SGK SK EA
Sbjct: 485 KAESAAVQEANGHGLENNNTSD-DALGNSDGKKSSKKQKVDVKDQPESGKDPSKK---EA 540
Query: 1145 SEVAKSFGTEEDKDGIRGRKDKEQRKEFLQREIEKRFVRTNSLGKDKNYNRYWFFSRDGR 1324
+++ + DK +K EQR+E+LQREI+KRF+RT LGKDK+YNRYWFF RDGR
Sbjct: 541 NKMTLQ-QPKADKKETTEKKSIEQRREYLQREIDKRFIRTEPLGKDKDYNRYWFFRRDGR 599
Query: 1325 IFVESPDSKLWGYYSSKDELDALIGSLNVKGVRERALQKQLNKCYDRICSAIQKRSKDIA 1504
IFVES DSK WGYYS+K+ELDA GSLN KGVRERALQ QL K ++IC +QKRSKD+A
Sbjct: 600 IFVESWDSKQWGYYSTKEELDAFKGSLNRKGVRERALQSQLEKSNNKICFELQKRSKDVA 659
Query: 1505 HKIAMEEAXXXXXXXXXAPQKDSPALAFLSYVNKWKD 1615
KIAMEEA AP +D+PA+AFL YVNKWK+
Sbjct: 660 QKIAMEEAVLRRSTRVRAPPRDNPAVAFLKYVNKWKE 696
>ref|XP_002272046.2| PREDICTED: DDT domain-containing protein DDB_G0282237 [Vitis
vinifera]
Length = 621
Score = 551 bits (1420), Expect = e-154
Identities = 291/539 (53%), Positives = 360/539 (66%), Gaps = 1/539 (0%)
Frame = +2
Query: 2 KDQSVCPCKILKVLGDAE-KSSYEVGWIDKDKNVIDHSVVRAEDLIRKKLPFTREVLKSF 178
+D V C+I+KVL + + K+ YEV W+DKDK I +VV AEDLIRKKLPFTREVLKSF
Sbjct: 125 RDDCVSLCQIIKVLEEGDNKTRYEVAWLDKDKKRIGTAVVNAEDLIRKKLPFTREVLKSF 184
Query: 179 IRESTSRSFPWILHEKLARQYGVSTEVPEELQDXXXXXXXXXXXXFETENSHGSXXXXXE 358
IREST R+ PW+LH+K A+++ +ST+ PEE++ + + E
Sbjct: 185 IRESTYRNVPWVLHDKWAQEHAISTDPPEEIRSKYFFKDGHLVINKKKRKTEDDKQNITE 244
Query: 359 DEPAEPIKYPIDDLLVQPDADDPVLTDRPTPSRDFNVPMDCVGDLLMVWDFCSSFSKLLQ 538
EPI YPIDDLLV+P DDPV TDRP+PSRDF VPMDCVGDLLMVWDF SSF +LL
Sbjct: 245 ----EPINYPIDDLLVRPGPDDPVFTDRPSPSRDFTVPMDCVGDLLMVWDFVSSFGRLLH 300
Query: 539 LSPFSLEDFQNAICHKDNNLILIVESHAAVLRLLIKERGEYFTAIHNKNRSGTITVINWT 718
L PFSL+DF+NAICHKD+NLI+IVE+H+A+LRLL+K+ G+YFTAI K R IT+I WT
Sbjct: 301 LFPFSLQDFENAICHKDSNLIIIVETHSALLRLLVKDDGQYFTAIQEKKRKPKITIITWT 360
Query: 719 NYVCDFLEMVDVPELSTNIATIKRSQYGILETHAKLGIFRELVSQALASDAVRELLDTLI 898
Y+CDFLEMV++PELS+ I TIKR YG+LETHAKLGIFREL++Q LA+D VR+ LD I
Sbjct: 361 EYLCDFLEMVEMPELSSCIPTIKRGHYGLLETHAKLGIFRELIAQTLATDLVRKKLDEYI 420
Query: 899 EQQQALAATXXXXXXXXXXXXXXXXXLQKAVSGTKEITGRILQENGGGHLHIQENGEGNR 1078
E++Q LAAT KA S + + NG G
Sbjct: 421 EERQTLAATKRGEAIEEGRKKREEKERLKAESAAVQ----------------EANGHG-L 463
Query: 1079 QNGHVAKDISGKRKSKSVNMEASEVAKSFGTEEDKDGIRGRKDKEQRKEFLQREIEKRFV 1258
+N + + D G + DG + K ++ +E+LQREI+KRF+
Sbjct: 464 ENNNTSDDALG----------------------NSDGKKSSKKQKVDREYLQREIDKRFI 501
Query: 1259 RTNSLGKDKNYNRYWFFSRDGRIFVESPDSKLWGYYSSKDELDALIGSLNVKGVRERALQ 1438
RT LGKDK+YNRYWFF RDGRIFVES DSK WGYYS+K+ELDA GSLN KGVRERALQ
Sbjct: 502 RTEPLGKDKDYNRYWFFRRDGRIFVESWDSKQWGYYSTKEELDAFKGSLNRKGVRERALQ 561
Query: 1439 KQLNKCYDRICSAIQKRSKDIAHKIAMEEAXXXXXXXXXAPQKDSPALAFLSYVNKWKD 1615
QL K ++IC +QKRSKD+A KIAMEEA AP +D+PA+AFL YVNKWK+
Sbjct: 562 SQLEKSNNKICFELQKRSKDVAQKIAMEEAVLRRSTRVRAPPRDNPAVAFLKYVNKWKE 620
>ref|XP_002325278.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
gi|222862153|gb|EEE99659.1| nucleosome/chromatin assembly
factor group [Populus trichocarpa]
Length = 616
Score = 489 bits (1258), Expect = e-135
Identities = 260/535 (48%), Positives = 344/535 (64%), Gaps = 1/535 (0%)
Frame = +2
Query: 14 VCPCKILKVLGDAE-KSSYEVGWIDKDKNVIDHSVVRAEDLIRKKLPFTREVLKSFIRES 190
+CPCKILKVL + K+ YEV W+D++K V + ++V DLI KK PF+R LK FIR+S
Sbjct: 130 LCPCKILKVLEEGTVKTKYEVAWLDRNKKVTETAIVNRNDLIWKKSPFSRNSLKPFIRKS 189
Query: 191 TSRSFPWILHEKLARQYGVSTEVPEELQDXXXXXXXXXXXXFETENSHGSXXXXXEDEPA 370
T RSFPW+LH+KLA +Y +S + P++L+ + +D
Sbjct: 190 TYRSFPWVLHDKLAEKYRISRDPPQDLKGKVFILDGIVYNKRK------------KDATE 237
Query: 371 EPIKYPIDDLLVQPDADDPVLTDRPTPSRDFNVPMDCVGDLLMVWDFCSSFSKLLQLSPF 550
EPIKYPI+DLLVQP DDPV T RP PSRDF VPM+CVGDLLMVWDFCSSF KLL LSPF
Sbjct: 238 EPIKYPINDLLVQPGTDDPVFTARPLPSRDFKVPMNCVGDLLMVWDFCSSFCKLLHLSPF 297
Query: 551 SLEDFQNAICHKDNNLILIVESHAAVLRLLIKERGEYFTAIHNKNRSGTITVINWTNYVC 730
SLE+F+NAICHK +N+ LIVE+H+++LRLL ++ EYF+A+ + RS IT+ NWT Y+C
Sbjct: 298 SLEEFENAICHKGSNVNLIVETHSSLLRLLKHDKDEYFSAVQKRIRSLKITLTNWTEYLC 357
Query: 731 DFLEMVDVPELSTNIATIKRSQYGILETHAKLGIFRELVSQALASDAVRELLDTLIEQQQ 910
DF+E+++V + ST+I TIKR YG+L+ KLGI RELV++ L +D RE L +E++Q
Sbjct: 358 DFVEIINVGDFSTHITTIKRGHYGLLDAQVKLGILRELVNEVLETDIAREKLAEYVEERQ 417
Query: 911 ALAATXXXXXXXXXXXXXXXXXLQKAVSGTKEITGRILQENGGGHLHIQENGEGNRQNGH 1090
L AT L+ K + ++ NGH
Sbjct: 418 VLLATKRGEALEEGRKKREKEQLK-----AKSVANAVM-------------------NGH 453
Query: 1091 VAKDISGKRKSKSVNMEASEVAKSFGTEEDKDGIRGRKDKEQRKEFLQREIEKRFVRTNS 1270
A DI G K++ V S++ E K G K K +E+ +REIEKR + TN
Sbjct: 454 GA-DIIG--KNQPVESSRSDI------ESKKTG----KKKNMNREYFEREIEKRILHTNP 500
Query: 1271 LGKDKNYNRYWFFSRDGRIFVESPDSKLWGYYSSKDELDALIGSLNVKGVRERALQKQLN 1450
LGKD++YNRYW+F RDGR+FVES DSKLWGYY K+E+D L+GSLN KG RE+AL+KQ+
Sbjct: 501 LGKDRDYNRYWWFKRDGRMFVESSDSKLWGYYCCKEEIDLLMGSLNPKGEREKALRKQVE 560
Query: 1451 KCYDRICSAIQKRSKDIAHKIAMEEAXXXXXXXXXAPQKDSPALAFLSYVNKWKD 1615
K Y RIC +QKRSKD+A++IA+EEA A +++PA AFL+YVNKWK+
Sbjct: 561 KFYSRICMELQKRSKDLANRIALEEAVQRRSTRVRALPRENPANAFLNYVNKWKE 615
>ref|XP_004147319.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like [Cucumis
sativus]
Length = 615
Score = 480 bits (1236), Expect = e-133
Identities = 257/539 (47%), Positives = 338/539 (62%), Gaps = 1/539 (0%)
Frame = +2
Query: 2 KDQSVCPCKILKVLGD-AEKSSYEVGWIDKDKNVIDHSVVRAEDLIRKKLPFTREVLKSF 178
KD + PCKI KVL + A++ YEV W+DK+K V + S++ AEDL++KK P +R LKSF
Sbjct: 125 KDDQIYPCKIFKVLENGADEVQYEVVWLDKNKKVTETSLLNAEDLVQKKPPLSRRFLKSF 184
Query: 179 IRESTSRSFPWILHEKLARQYGVSTEVPEELQDXXXXXXXXXXXXFETENSHGSXXXXXE 358
IREST RS PW+LH+KLA+ +G+ST +P+EL+ + +
Sbjct: 185 IRESTYRSAPWVLHDKLAQNHGISTALPQELRSKAFFRDGLLICNKKRK----------- 233
Query: 359 DEPAEPIKYPIDDLLVQPDADDPVLTDRPTPSRDFNVPMDCVGDLLMVWDFCSSFSKLLQ 538
D + IKYPIDDLLVQP DDPV +RP+ SR+FNVPM+CVGDLLMVWDFCSSFS+LL
Sbjct: 234 DLLDQDIKYPIDDLLVQPGPDDPVFLERPSASREFNVPMNCVGDLLMVWDFCSSFSRLLH 293
Query: 539 LSPFSLEDFQNAICHKDNNLILIVESHAAVLRLLIKERGEYFTAIHNKNRSGTITVINWT 718
L PFSL+DF+ AI HK++ L+VE+H+A RLL+K+ GEY + + K R IT+INWT
Sbjct: 294 LWPFSLDDFERAIYHKESTAPLLVEAHSAFFRLLLKDEGEYSSLVQGKKRKMKITLINWT 353
Query: 719 NYVCDFLEMVDVPELSTNIATIKRSQYGILETHAKLGIFRELVSQALASDAVRELLDTLI 898
Y+CDFLEM+ +L N ATIKR YG+L TH KLGI ELV+ +L S+ RE LD +I
Sbjct: 354 EYLCDFLEMIGNAKLCANTATIKRGHYGLLATHVKLGILCELVNHSLESNIFREKLDEII 413
Query: 899 EQQQALAATXXXXXXXXXXXXXXXXXLQKAVSGTKEITGRILQENGGGHLHIQENGEGNR 1078
EQ+QAL AT G L+E +
Sbjct: 414 EQRQALGATR---------------------------RGEALEEGRKKREEKERLKSEPM 446
Query: 1079 QNGHVAKDISGKRKSKSVNMEASEVAKSFGTEEDKDGIRGRKDKEQRKEFLQREIEKRFV 1258
NGHV + K K SE+AK+ KD K++ +E+ +RE+EKR +
Sbjct: 447 SNGHVNGHLMDKEK--------SEIAKTDHGRRSKD---SSKNRNGVREYYERELEKRSI 495
Query: 1259 RTNSLGKDKNYNRYWFFSRDGRIFVESPDSKLWGYYSSKDELDALIGSLNVKGVRERALQ 1438
+TN LGKD+++NRYW+F RDGRIFVES DSK WGYYSS +ELD +GSLN KG RERAL
Sbjct: 496 KTNPLGKDRHHNRYWWFRRDGRIFVESSDSKEWGYYSSMEELDTFMGSLNCKGERERALS 555
Query: 1439 KQLNKCYDRICSAIQKRSKDIAHKIAMEEAXXXXXXXXXAPQKDSPALAFLSYVNKWKD 1615
K L K Y +IC + KRSK++ ++IA+EEA AP +++PA A+L YVN+WK+
Sbjct: 556 KHLEKFYSKICLELNKRSKELTNQIAVEEAVLRRSTRVRAPPRENPATAYLRYVNRWKE 614
>ref|XP_003532375.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like [Glycine
max]
Length = 683
Score = 471 bits (1211), Expect = e-130
Identities = 261/564 (46%), Positives = 352/564 (62%), Gaps = 28/564 (4%)
Frame = +2
Query: 2 KDQSVCPCKILKVLGDA-EKSSYEVGWIDKDKNVIDHSVVRAEDLIRKKLPFTREVLKSF 178
KD V PCKILKV+ + SYEV W+DK+KN+ + + V AEDL+ KK F+R +LKSF
Sbjct: 125 KDDGVHPCKILKVIQKGVDTVSYEVAWLDKNKNIREQAEVSAEDLVHKKPLFSRNILKSF 184
Query: 179 IRESTSRSFPWILHEKLARQYGVSTEVPEELQDXXXXXXXXXXXXFETENSHGSXXXXXE 358
IREST R+ PW+LH++LA+ +G+ST++PE+LQ + +N
Sbjct: 185 IRESTYRNAPWVLHDELAKNHGISTDIPEDLQGRVFYKYGLLVCSKKRKNE--------V 236
Query: 359 DEPAEPIKYPIDDLLVQPDADDPVLTDRPTPSRDFNVPMDCVGDLLMVWDFCSSFSKLLQ 538
D E IKYPIDDLLV P DDPV TDRP+P++DFN+PM CVG+LLMVWDF SSF +LLQ
Sbjct: 237 DRNDEAIKYPIDDLLVTPSPDDPVFTDRPSPAKDFNIPMSCVGELLMVWDFLSSFGRLLQ 296
Query: 539 LSPFSLEDFQNAICHKDNNLILIVESHAAVLRLLIKERGEYFTAIHNKNRSGTITVINWT 718
LSP+SLEDF+ AICHKD+N+ L++ESHAA+ RLLIK++ EY + N+ IT NWT
Sbjct: 297 LSPYSLEDFEFAICHKDSNVALLMESHAALFRLLIKDKDEYSLVVKNRKLKSKITTNNWT 356
Query: 719 NYVCDFLEMVDVPELSTNIATIKRSQYGILETHAKLGIFRELVSQALASDAVRELLDTLI 898
Y+C FLEM+++PEL + TIKR YG+++ AKL I ELV++AL + RE LD +I
Sbjct: 357 EYLCHFLEMINIPELRQHKTTIKRGHYGLVDASAKLKILGELVNRALETAIFREKLDEII 416
Query: 899 EQQQALAATXXXXXXXXXXXXXXXXXLQKAVSGTKE-ITGRILQENG-GGHLHIQENG-- 1066
EQ+QAL AT KA S + + G + N ++H +NG
Sbjct: 417 EQRQALGATRREEALENGRRRREEKERMKAESESNGFVDGHLNGANVLANNIHGIQNGDV 476
Query: 1067 --------EGNRQNGHVAK------DISGKRKSKSVN---MEASEVAKSFGTEEDKDGIR 1195
E + QN + + + + K+ K +N E +E K +E ++
Sbjct: 477 GEKRIIEIEPSGQNDPLGRSGIKHLNPAPKKTLKKLNSELKEPTENGKELSRKESPKQLK 536
Query: 1196 GRKD------KEQRKEFLQREIEKRFVRTNSLGKDKNYNRYWFFSRDGRIFVESPDSKLW 1357
KD KEQRKE+ +RE+EKRF+R + LGKD+++NRYW+F R GRIFVES DSK W
Sbjct: 537 ADKDSSEKNSKEQRKEYFEREMEKRFIRRSPLGKDRDHNRYWWFCRYGRIFVESCDSKNW 596
Query: 1358 GYYSSKDELDALIGSLNVKGVRERALQKQLNKCYDRICSAIQKRSKDIAHKIAMEEAXXX 1537
GYYSSK+ELD L+ SLN KG RERALQK L K Y+ ICS +QK SKD+ H+ ++E+
Sbjct: 597 GYYSSKEELDTLMSSLNCKGERERALQKHLEKYYNTICSELQKTSKDLMHRF-VDESVLR 655
Query: 1538 XXXXXXAPQKDSPALAFLSYVNKW 1609
A + +P+ A L Y NK+
Sbjct: 656 RSTRVRAQPRQNPSDACLRYRNKY 679