BLASTX nr result
ID: Coptis21_contig00019402
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00019402 (471 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133847.1| PREDICTED: C-terminal binding protein AN-lik... 50 5e-10 ref|XP_002320825.1| predicted protein [Populus trichocarpa] gi|2... 43 4e-06 >ref|XP_004133847.1| PREDICTED: C-terminal binding protein AN-like [Cucumis sativus] Length = 944 Score = 50.1 bits (118), Expect(2) = 5e-10 Identities = 23/42 (54%), Positives = 32/42 (76%) Frame = +2 Query: 2 EDEETGKENCGGSNGMIRQRKFEVSDSEVEEYDPERKVTPGY 127 EDEE GKE GSNG+IR +K ++ +SEV++YDP+ K+ GY Sbjct: 213 EDEEVGKEE-NGSNGLIRHQKVQMLESEVDDYDPDGKMGHGY 253 Score = 38.5 bits (88), Expect(2) = 5e-10 Identities = 20/44 (45%), Positives = 21/44 (47%) Frame = +3 Query: 231 DMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXXXXXXMRSYQ 362 D YT EDGQL+WFNAGVR MRSYQ Sbjct: 256 DDMYTGEDGQLSWFNAGVRVGVGIGLGVCLGVGIGVGLLMRSYQ 299 >ref|XP_002320825.1| predicted protein [Populus trichocarpa] gi|222861598|gb|EEE99140.1| predicted protein [Populus trichocarpa] Length = 305 Score = 43.1 bits (100), Expect(2) = 4e-06 Identities = 24/47 (51%), Positives = 25/47 (53%) Frame = +3 Query: 225 SEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXXXXXXMRSYQA 365 SEDMYY EDGQL+WFNAGVR MRSYQA Sbjct: 251 SEDMYY-GEDGQLSWFNAGVRVGVGIGLGMCLGAGIGVGLLMRSYQA 296 Score = 32.3 bits (72), Expect(2) = 4e-06 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Frame = +2 Query: 2 EDEETGKENCGG--SNGMIRQRKFEVSDSEVEE-YDPERKVTPGY 127 EDEE G SNG++RQRK +++++E ++ Y+ + K+ Y Sbjct: 205 EDEELDNRKQNGVISNGLVRQRKVQITEAEDDDGYESDEKIGSQY 249