BLASTX nr result

ID: Coptis21_contig00019402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019402
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133847.1| PREDICTED: C-terminal binding protein AN-lik...    50   5e-10
ref|XP_002320825.1| predicted protein [Populus trichocarpa] gi|2...    43   4e-06

>ref|XP_004133847.1| PREDICTED: C-terminal binding protein AN-like [Cucumis sativus]
          Length = 944

 Score = 50.1 bits (118), Expect(2) = 5e-10
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   EDEETGKENCGGSNGMIRQRKFEVSDSEVEEYDPERKVTPGY 127
           EDEE GKE   GSNG+IR +K ++ +SEV++YDP+ K+  GY
Sbjct: 213 EDEEVGKEE-NGSNGLIRHQKVQMLESEVDDYDPDGKMGHGY 253



 Score = 38.5 bits (88), Expect(2) = 5e-10
 Identities = 20/44 (45%), Positives = 21/44 (47%)
 Frame = +3

Query: 231 DMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXXXXXXMRSYQ 362
           D  YT EDGQL+WFNAGVR                    MRSYQ
Sbjct: 256 DDMYTGEDGQLSWFNAGVRVGVGIGLGVCLGVGIGVGLLMRSYQ 299


>ref|XP_002320825.1| predicted protein [Populus trichocarpa] gi|222861598|gb|EEE99140.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 24/47 (51%), Positives = 25/47 (53%)
 Frame = +3

Query: 225 SEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXXXXXXMRSYQA 365
           SEDMYY  EDGQL+WFNAGVR                    MRSYQA
Sbjct: 251 SEDMYY-GEDGQLSWFNAGVRVGVGIGLGMCLGAGIGVGLLMRSYQA 296



 Score = 32.3 bits (72), Expect(2) = 4e-06
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
 Frame = +2

Query: 2   EDEETGKENCGG--SNGMIRQRKFEVSDSEVEE-YDPERKVTPGY 127
           EDEE       G  SNG++RQRK +++++E ++ Y+ + K+   Y
Sbjct: 205 EDEELDNRKQNGVISNGLVRQRKVQITEAEDDDGYESDEKIGSQY 249


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