BLASTX nr result

ID: Coptis21_contig00019397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019397
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|2...   525   e-146
ref|XP_002272202.2| PREDICTED: F-box/LRR-repeat protein 14 [Viti...   518   e-144
ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   508   e-142
ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   508   e-141
ref|XP_003543698.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   476   e-132

>ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|222866767|gb|EEF03898.1|
            predicted protein [Populus trichocarpa]
          Length = 467

 Score =  525 bits (1351), Expect = e-146
 Identities = 251/329 (76%), Positives = 297/329 (90%), Gaps = 1/329 (0%)
 Frame = -2

Query: 1137 LSLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLETLQDLSIKNCRAIGEGDLIKLGPGWR 958
            LSL VGCKNLT LHLIRCLNV+SVEWLEY+GKLETL+DLSIKNCRA+GEGDLIKLG  WR
Sbjct: 141  LSLVVGCKNLTILHLIRCLNVTSVEWLEYIGKLETLEDLSIKNCRALGEGDLIKLGSSWR 200

Query: 957  KLKRLEFEVDANYRYMKVHDRLAMDRWKK-CVPCDSMEELSLVNCLISPERGLSCVFGRC 781
            KLKRL+FEVDANYRYMKV+DRLA+DRW+K  +PC+SM ELSLVNC+ISP RGL+C+ G+C
Sbjct: 201  KLKRLQFEVDANYRYMKVYDRLAVDRWQKQWIPCESMLELSLVNCIISPGRGLACMLGKC 260

Query: 780  KSLMKLHLDMCVGVRDCDIVSLARRSSNLKSISLRVPSDYSLPLPRLINDSLRLTDQSLR 601
            K+L K+HLDMCVGVRDCDI+ LA++SSNL+SISLRVPSD+SLPL  L+N+ LRLTD+SL+
Sbjct: 261  KNLEKIHLDMCVGVRDCDIIGLAKKSSNLRSISLRVPSDFSLPL--LMNNPLRLTDESLK 318

Query: 600  AVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELCPVRILVLDRVYSFNDLGMEAL 421
            A+A NCSMLESV ISFSDGEFP  +SFT NGIL LI++CP+R L LD VYSFND+GMEAL
Sbjct: 319  ALAQNCSMLESVRISFSDGEFPSFSSFTQNGILNLIQMCPIRELALDHVYSFNDVGMEAL 378

Query: 420  CSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKCLGLTDDGLRPLVESDKLEMLT 241
            CSA +LETLELVRCQEI+DEGLQLV  FPRLC+LRL KCLG+TDDGL PL  +DKL+ L 
Sbjct: 379  CSAHYLETLELVRCQEISDEGLQLVGQFPRLCILRLKKCLGVTDDGLYPLAGTDKLDFLA 438

Query: 240  VEDCPQVSKRGIQGAAKSVSYKQDMSWLH 154
            VEDCPQ+S+RG+QGAA+SVS++QD+SW++
Sbjct: 439  VEDCPQISERGVQGAARSVSFRQDLSWMY 467


>ref|XP_002272202.2| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
          Length = 475

 Score =  518 bits (1333), Expect = e-144
 Identities = 250/329 (75%), Positives = 296/329 (89%), Gaps = 1/329 (0%)
 Frame = -2

Query: 1137 LSLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLETLQDLSIKNCRAIGEGDLIKLGPGWR 958
            LSL VGCK LT LHLIRCLNVSSVEWLEYLGKLETL+DLSIKNCRAIGEGDLIKLGP WR
Sbjct: 149  LSLVVGCKKLTVLHLIRCLNVSSVEWLEYLGKLETLEDLSIKNCRAIGEGDLIKLGPTWR 208

Query: 957  KLKRLEFEVDANYRYMKVHDRLAMDRWKK-CVPCDSMEELSLVNCLISPERGLSCVFGRC 781
            K+KRL+FEVD NYRYMKV+DRLA+DRW+K  VPC++M ELSLVNC+ISP RGL+C+  +C
Sbjct: 209  KIKRLQFEVDVNYRYMKVYDRLAVDRWQKQLVPCENMLELSLVNCIISPGRGLACLLEKC 268

Query: 780  KSLMKLHLDMCVGVRDCDIVSLARRSSNLKSISLRVPSDYSLPLPRLINDSLRLTDQSLR 601
            K+L K+ LDMCVGVRDCDIV LA++SSNL+SISLR PSD+SLPL  L+++ LRLTD+SL+
Sbjct: 269  KNLEKIRLDMCVGVRDCDIVGLAQKSSNLRSISLRGPSDFSLPL--LLSNPLRLTDESLK 326

Query: 600  AVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELCPVRILVLDRVYSFNDLGMEAL 421
            A+A NCSMLES+ ISF+DGEFP  +SFTLNGIL +I++CP+R L LD VYSFND+GMEAL
Sbjct: 327  ALAQNCSMLESIRISFTDGEFPSFSSFTLNGILTVIQMCPIRKLSLDHVYSFNDVGMEAL 386

Query: 420  CSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKCLGLTDDGLRPLVESDKLEMLT 241
            CSA +LETLELVRCQEITDEGLQLV  FP LCVLRLSKCLG+TDDG +PLV S KLE+L+
Sbjct: 387  CSAPYLETLELVRCQEITDEGLQLVAQFPHLCVLRLSKCLGVTDDGFKPLVGSYKLELLS 446

Query: 240  VEDCPQVSKRGIQGAAKSVSYKQDMSWLH 154
            VE+CPQ+S+RG+QGAA+SVS+KQD+SW++
Sbjct: 447  VENCPQISERGVQGAARSVSFKQDLSWIY 475


>ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
            gi|449491060|ref|XP_004158787.1| PREDICTED:
            F-box/LRR-repeat protein 14-like [Cucumis sativus]
          Length = 481

 Score =  508 bits (1309), Expect = e-142
 Identities = 245/328 (74%), Positives = 294/328 (89%), Gaps = 1/328 (0%)
 Frame = -2

Query: 1134 SLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLETLQDLSIKNCRAIGEGDLIKLGPGWRK 955
            S+AVGCKNLT LHLIRCLNVSSVEWLEYLGKLETL+DLSI+NCRAIGEGDLIKLG  WRK
Sbjct: 156  SIAVGCKNLTVLHLIRCLNVSSVEWLEYLGKLETLEDLSIRNCRAIGEGDLIKLGHSWRK 215

Query: 954  LKRLEFEVDANYRYMKVHDRLAMDRWKK-CVPCDSMEELSLVNCLISPERGLSCVFGRCK 778
            LKRL+FEVDANYRYMKV+DRLA+DRW+K  + CD M ELSLVNC+ISP RGL+CV G+CK
Sbjct: 216  LKRLQFEVDANYRYMKVYDRLAVDRWQKQWISCDDMLELSLVNCIISPGRGLACVLGKCK 275

Query: 777  SLMKLHLDMCVGVRDCDIVSLARRSSNLKSISLRVPSDYSLPLPRLINDSLRLTDQSLRA 598
            +L K+HLDMCVGVRDCDI+SLAR S NL+SISLRVPSD+SLPL  L N++LRLTD+SL+A
Sbjct: 276  NLQKVHLDMCVGVRDCDIISLARESRNLRSISLRVPSDFSLPL--LANNTLRLTDESLKA 333

Query: 597  VAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELCPVRILVLDRVYSFNDLGMEALC 418
            +A NCS LESV ISF+DGEFP L+SF+LNGIL L+ +CPVR L LD VYSFND+G+EALC
Sbjct: 334  LAENCSHLESVRISFADGEFPSLSSFSLNGILVLVRMCPVRELALDHVYSFNDMGLEALC 393

Query: 417  SAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKCLGLTDDGLRPLVESDKLEMLTV 238
            SA +LE+LELVRCQEI+D+GLQLV+ FP+L  LRLSKCLG+TDDGL+ LV++ KLE L V
Sbjct: 394  SASYLESLELVRCQEISDDGLQLVSQFPQLQNLRLSKCLGITDDGLKLLVDTYKLESLVV 453

Query: 237  EDCPQVSKRGIQGAAKSVSYKQDMSWLH 154
            EDCPQ+S+RG+ GAA+++S++QD+SW++
Sbjct: 454  EDCPQISERGVHGAARAISFRQDLSWMY 481


>ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
          Length = 492

 Score =  508 bits (1307), Expect = e-141
 Identities = 246/329 (74%), Positives = 294/329 (89%), Gaps = 1/329 (0%)
 Frame = -2

Query: 1137 LSLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLETLQDLSIKNCRAIGEGDLIKLGPGWR 958
            LSL VGCKNL++LHLIRCLNVSSVEWLEYLGKL  L+DLSIKNCRAIGEGDLIKLGPGW+
Sbjct: 166  LSLVVGCKNLSSLHLIRCLNVSSVEWLEYLGKLGRLEDLSIKNCRAIGEGDLIKLGPGWQ 225

Query: 957  KLKRLEFEVDANYRYMKVHDRLAMDRWKKC-VPCDSMEELSLVNCLISPERGLSCVFGRC 781
            KL RL+FEVDANYRYMKV+DRL++DRW+K  VPC++M ELSLVNC+ISP RGL+CV  +C
Sbjct: 226  KLTRLQFEVDANYRYMKVYDRLSVDRWQKQHVPCENMLELSLVNCIISPGRGLACVLRKC 285

Query: 780  KSLMKLHLDMCVGVRDCDIVSLARRSSNLKSISLRVPSDYSLPLPRLINDSLRLTDQSLR 601
            K+L K+HLDMCVGVRD DI+ L++RSSNLKS+SLRVPSD+SLP   L+N+ LRLTD+SL+
Sbjct: 286  KNLQKIHLDMCVGVRDFDIICLSQRSSNLKSVSLRVPSDFSLP--SLVNNPLRLTDESLK 343

Query: 600  AVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELCPVRILVLDRVYSFNDLGMEAL 421
            A+A NCS LESV ISFSDGEFP  +SFTL+GIL LI+ CPVR L LD VYSFND+GMEAL
Sbjct: 344  ALAQNCSKLESVRISFSDGEFPSSSSFTLSGILCLIQRCPVRQLALDHVYSFNDVGMEAL 403

Query: 420  CSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKCLGLTDDGLRPLVESDKLEMLT 241
            CS  +LE+LELVRCQEI+DEGLQLV+ FPRLC+LRLSKCLG++DDGL+PLV S KL+ L 
Sbjct: 404  CSLEYLESLELVRCQEISDEGLQLVSQFPRLCILRLSKCLGISDDGLKPLVGSLKLDFLA 463

Query: 240  VEDCPQVSKRGIQGAAKSVSYKQDMSWLH 154
            +EDCPQ+S+RG+Q AAKSVS++QD+SW++
Sbjct: 464  IEDCPQISERGVQRAAKSVSFRQDLSWMY 492


>ref|XP_003543698.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
          Length = 449

 Score =  476 bits (1225), Expect = e-132
 Identities = 235/329 (71%), Positives = 280/329 (85%), Gaps = 1/329 (0%)
 Frame = -2

Query: 1137 LSLAVGCKNLTTLHLIRCLNVSSVEWLEYLGKLETLQDLSIKNCRAIGEGDLIKLGPGWR 958
            LSL VGCKNL++LHLIRCLNVSSVEWLEYLGKL TL+DLSIKNCRAIGEGDLIKLGPGW+
Sbjct: 141  LSLVVGCKNLSSLHLIRCLNVSSVEWLEYLGKLGTLEDLSIKNCRAIGEGDLIKLGPGWQ 200

Query: 957  KLKRLEFEVDANYRYMKVHDRLAMDRWKK-CVPCDSMEELSLVNCLISPERGLSCVFGRC 781
            KL RL+FEVDANYRYMKV+DRL++DRW+K  VPC +M ELSLVNC+ISP RGL+CV  +C
Sbjct: 201  KLTRLQFEVDANYRYMKVYDRLSVDRWQKQYVPCGNMLELSLVNCIISPGRGLACVLSKC 260

Query: 780  KSLMKLHLDMCVGVRDCDIVSLARRSSNLKSISLRVPSDYSLPLPRLINDSLRLTDQSLR 601
            K+L K+HLDMCVGVRD DI+ L++RSS LKS+SLRVPSD+SLP   L+N+ LRLTD+SL+
Sbjct: 261  KNLQKIHLDMCVGVRDFDIICLSQRSSELKSVSLRVPSDFSLP--SLVNNPLRLTDESLK 318

Query: 600  AVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELCPVRILVLDRVYSFNDLGMEAL 421
            A+A NCS LESV ISFSDGE                  C VR L LD VYSFND+GMEAL
Sbjct: 319  ALAQNCSKLESVRISFSDGE------------------CLVRQLALDHVYSFNDVGMEAL 360

Query: 420  CSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKCLGLTDDGLRPLVESDKLEMLT 241
            CSA +LE+LELV+CQEI+DEGLQLV+ FPRLC+LRLSKCLG++DDGL+PLV S KL+ L 
Sbjct: 361  CSAEYLESLELVKCQEISDEGLQLVSQFPRLCILRLSKCLGISDDGLKPLVGSLKLDFLA 420

Query: 240  VEDCPQVSKRGIQGAAKSVSYKQDMSWLH 154
            +EDCPQ+S+RG+QGAAKSVS++QD+SW++
Sbjct: 421  IEDCPQISERGVQGAAKSVSFRQDLSWMY 449


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