BLASTX nr result
ID: Coptis21_contig00019392
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00019392 (293 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 75 4e-12 ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-11 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-11 dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop... 70 1e-10 >ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1| predicted protein [Populus trichocarpa] Length = 331 Score = 75.5 bits (184), Expect = 4e-12 Identities = 33/97 (34%), Positives = 55/97 (56%) Frame = -2 Query: 292 EDRVVWLNSSMGAFTSKAAYQALRRKRNKPNWCSMVWGKLVLPKYSFNGWQLFSRSRPTQ 113 +D +VWL+S F+ K A++ LRR R+ W +VW K +P++SF W + + TQ Sbjct: 129 KDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQ 188 Query: 112 DRLMHKKVLATSSCCFCDSARENSKHLFFDCPFSKSV 2 D+L + + C C E+ HLFF+C ++K++ Sbjct: 189 DKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 225 >ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 74.3 bits (181), Expect = 1e-11 Identities = 32/97 (32%), Positives = 54/97 (55%) Frame = -2 Query: 292 EDRVVWLNSSMGAFTSKAAYQALRRKRNKPNWCSMVWGKLVLPKYSFNGWQLFSRSRPTQ 113 +D ++WL+S F+ K A++ LRR R W +VW K +P++SF W + + TQ Sbjct: 844 KDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQ 903 Query: 112 DRLMHKKVLATSSCCFCDSARENSKHLFFDCPFSKSV 2 D+L + + C C E+ HLFF+C ++K++ Sbjct: 904 DKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 940 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/97 (34%), Positives = 52/97 (53%) Frame = -2 Query: 292 EDRVVWLNSSMGAFTSKAAYQALRRKRNKPNWCSMVWGKLVLPKYSFNGWQLFSRSRPTQ 113 +D +VWL+S F K A++ LRR R W +VW K +P++SF W + TQ Sbjct: 1184 KDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQ 1243 Query: 112 DRLMHKKVLATSSCCFCDSARENSKHLFFDCPFSKSV 2 D+L + + C C E+ HLFF+C ++K++ Sbjct: 1244 DKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 1280 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/97 (34%), Positives = 53/97 (54%) Frame = -2 Query: 292 EDRVVWLNSSMGAFTSKAAYQALRRKRNKPNWCSMVWGKLVLPKYSFNGWQLFSRSRPTQ 113 +D +VWL+S F+ K A++ LRR R W +VW K +P++SF W + TQ Sbjct: 311 KDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQ 370 Query: 112 DRLMHKKVLATSSCCFCDSARENSKHLFFDCPFSKSV 2 D+L + + C C E+ HLFF+C ++K++ Sbjct: 371 DKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 407 >dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana] Length = 278 Score = 70.5 bits (171), Expect = 1e-10 Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 3/99 (3%) Frame = -2 Query: 289 DRVVWL---NSSMGAFTSKAAYQALRRKRNKPNWCSMVWGKLVLPKYSFNGWQLFSRSRP 119 DR +W +S G+F+S +Q +R N+ W VW PKYSF W F Sbjct: 78 DRSLWKQKEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLA 137 Query: 118 TQDRLMHKKVLATSSCCFCDSARENSKHLFFDCPFSKSV 2 T DRL A ++C FCD E HLFF CP+S + Sbjct: 138 TGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQI 176