BLASTX nr result

ID: Coptis21_contig00019390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019390
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274500.1| PREDICTED: ABC transporter I family member 1...   207   8e-52
ref|XP_003622165.1| ABC transporter I family member [Medicago tr...   206   2e-51
ref|XP_004173031.1| PREDICTED: ABC transporter I family member 1...   203   2e-50
ref|XP_004138625.1| PREDICTED: ABC transporter I family member 1...   203   2e-50
ref|NP_196914.1| ABC transporter I family member 11 [Arabidopsis...   201   8e-50

>ref|XP_002274500.1| PREDICTED: ABC transporter I family member 11, chloroplastic [Vitis
           vinifera] gi|296082322|emb|CBI21327.3| unnamed protein
           product [Vitis vinifera]
          Length = 284

 Score =  207 bits (528), Expect = 8e-52
 Identities = 104/150 (69%), Positives = 121/150 (80%)
 Frame = +1

Query: 142 SRTKRFNFANPRGLNITSDYSCFEVKGVSYRPPGTQHNLLSDVHFSLHEKSLGLIFGRSG 321
           +R  R  F   R L I+ +YSC EV+GVSYRP GT+ +LL+DV+FSL EKS GLIFGRSG
Sbjct: 35  TRPCRSKFWRIRNLRISCEYSCIEVRGVSYRPQGTEFDLLNDVNFSLPEKSFGLIFGRSG 94

Query: 322 SGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTV 501
           SGKTTLLQLLAG++KPTSG+I +Q+YG+DGK  Q    LP ERVGI+FQFPERYF+AD V
Sbjct: 95  SGKTTLLQLLAGINKPTSGSIFVQKYGDDGKLTQTSEPLPSERVGILFQFPERYFVADNV 154

Query: 502 LEEVTFGWPRQRESIHLKEQLASGLQRAIN 591
           LEEVTFGWPRQR S  LKE LA GL+RAIN
Sbjct: 155 LEEVTFGWPRQRGSFQLKEHLALGLERAIN 184


>ref|XP_003622165.1| ABC transporter I family member [Medicago truncatula]
           gi|355497180|gb|AES78383.1| ABC transporter I family
           member [Medicago truncatula]
          Length = 280

 Score =  206 bits (524), Expect = 2e-51
 Identities = 107/166 (64%), Positives = 127/166 (76%)
 Frame = +1

Query: 94  LLQPYSLNTSLSTKPSSRTKRFNFANPRGLNITSDYSCFEVKGVSYRPPGTQHNLLSDVH 273
           L  P S   SLS  P S    FN +  R       YS  EV+ VSY+PPGT+  LL+ V+
Sbjct: 20  LKPPLSSFPSLSRSPQSHCSFFNSSTTR-----CSYSSLEVRDVSYQPPGTEFKLLNSVN 74

Query: 274 FSLHEKSLGLIFGRSGSGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERV 453
           FSL EKSLGLIFG+SGSGKTTLLQLLAG++KPTSG+I+IQ+YG+DG P+Q+P  L PERV
Sbjct: 75  FSLPEKSLGLIFGQSGSGKTTLLQLLAGINKPTSGSIHIQKYGDDGSPSQSPEPLVPERV 134

Query: 454 GIVFQFPERYFLADTVLEEVTFGWPRQRESIHLKEQLASGLQRAIN 591
           GIVFQFPERYF+ADTVL+EVTFGWPRQ+ +  L+E LA GLQRAIN
Sbjct: 135 GIVFQFPERYFVADTVLDEVTFGWPRQKGNDQLRENLALGLQRAIN 180


>ref|XP_004173031.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like,
           partial [Cucumis sativus]
          Length = 246

 Score =  203 bits (516), Expect = 2e-50
 Identities = 103/151 (68%), Positives = 121/151 (80%)
 Frame = +1

Query: 139 SSRTKRFNFANPRGLNITSDYSCFEVKGVSYRPPGTQHNLLSDVHFSLHEKSLGLIFGRS 318
           SS ++R N      L + S+YSCFEV+ +SYRPPGT+H+LL+ V+FSL EKS GLIFG+S
Sbjct: 29  SSNSRRTN-----ALTLKSNYSCFEVRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQS 83

Query: 319 GSGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADT 498
           GSGKTTLLQLLAGLSKPTSG+I +Q+Y +DGKP Q+   L PERVGIVFQFPERYF+ D+
Sbjct: 84  GSGKTTLLQLLAGLSKPTSGSICVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDS 143

Query: 499 VLEEVTFGWPRQRESIHLKEQLASGLQRAIN 591
           VL EVTFGWPRQR    LKE LA  LQRAIN
Sbjct: 144 VLNEVTFGWPRQRSDSDLKENLALRLQRAIN 174


>ref|XP_004138625.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like
           [Cucumis sativus]
          Length = 274

 Score =  203 bits (516), Expect = 2e-50
 Identities = 103/151 (68%), Positives = 121/151 (80%)
 Frame = +1

Query: 139 SSRTKRFNFANPRGLNITSDYSCFEVKGVSYRPPGTQHNLLSDVHFSLHEKSLGLIFGRS 318
           SS ++R N      L + S+YSCFEV+ +SYRPPGT+H+LL+ V+FSL EKS GLIFG+S
Sbjct: 29  SSNSRRTN-----ALTLKSNYSCFEVRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQS 83

Query: 319 GSGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADT 498
           GSGKTTLLQLLAGLSKPTSG+I +Q+Y +DGKP Q+   L PERVGIVFQFPERYF+ D+
Sbjct: 84  GSGKTTLLQLLAGLSKPTSGSICVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDS 143

Query: 499 VLEEVTFGWPRQRESIHLKEQLASGLQRAIN 591
           VL EVTFGWPRQR    LKE LA  LQRAIN
Sbjct: 144 VLNEVTFGWPRQRSDSDLKENLALRLQRAIN 174


>ref|NP_196914.1| ABC transporter I family member 11 [Arabidopsis thaliana]
           gi|75330013|sp|Q8LEF6.1|AB11I_ARATH RecName: Full=ABC
           transporter I family member 11, chloroplastic; Short=ABC
           transporter ABCI.11; Short=AtABCI11; AltName:
           Full=Non-intrinsic ABC protein 14; Flags: Precursor
           gi|21553579|gb|AAM62672.1| contains similarity to ABC
           transporter, ATP-binding protein [Arabidopsis thaliana]
           gi|26452494|dbj|BAC43332.1| unknown protein [Arabidopsis
           thaliana] gi|29824157|gb|AAP04039.1| putative ABC
           transporter family protein [Arabidopsis thaliana]
           gi|332004604|gb|AED91987.1| ABC transporter I family
           member 11 [Arabidopsis thaliana]
          Length = 278

 Score =  201 bits (511), Expect = 8e-50
 Identities = 107/179 (59%), Positives = 131/179 (73%), Gaps = 2/179 (1%)
 Frame = +1

Query: 61  SAFLSLAPPLNLLQPYSL--NTSLSTKPSSRTKRFNFANPRGLNITSDYSCFEVKGVSYR 234
           S F S  P   + +P +   +T++  K   R +R     PR   I+ DYSC EV+ V YR
Sbjct: 4   STFSSPTPVFGIAEPPASFSSTAIGWKQPLRFRRTK--KPRV--ISCDYSCIEVRDVCYR 59

Query: 235 PPGTQHNLLSDVHFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSKPTSGTINIQRYGEDGK 414
           PPGTQ N+L+ V+FSL EKS GLIFG+SGSGKTTLLQLLAGL+KPTSG+I IQ YG+DG+
Sbjct: 60  PPGTQLNILNGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQGYGDDGQ 119

Query: 415 PNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRESIHLKEQLASGLQRAIN 591
           P   P  LP E+VGIVFQFPER+F+AD VL+E+TFGWPRQ+ S+ LKEQL S LQRA N
Sbjct: 120 PKADPDLLPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSNLQRAFN 178


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