BLASTX nr result
ID: Coptis21_contig00019382
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00019382 (1310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm... 323 6e-86 ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycin... 318 2e-84 ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana] ... 315 1e-83 ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arab... 314 3e-83 gb|AFK42853.1| unknown [Medicago truncatula] 314 4e-83 >ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis] gi|223527360|gb|EEF29504.1| conserved hypothetical protein [Ricinus communis] Length = 217 Score = 323 bits (828), Expect = 6e-86 Identities = 165/217 (76%), Positives = 181/217 (83%) Frame = -2 Query: 1054 MECAVEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQ 875 MEC V+GIIETQHVEALEILLQGLCGV +ER RIHELCLKSGPNLG V+SEVRLLCDLEQ Sbjct: 1 MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLGIVASEVRLLCDLEQ 60 Query: 874 SVPTWTVRHVGGAMRGAGAEQLSVVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSF 695 PTWTV+HVGGAMRGAGAEQ+SV+VR MVESKASKNVLR FY+LGYKLDHELL+VGF+F Sbjct: 61 PEPTWTVKHVGGAMRGAGAEQISVLVRTMVESKASKNVLRLFYALGYKLDHELLRVGFAF 120 Query: 694 HFQKSAQLKVSVTSVHKMPKLHAVEEAIPVTPGIQLVEVTXXXXXXXXXXXXXXVSSFCE 515 HFQ+ A++ V V+SV+KM KLHA +EA+PVTPGIQLVEVT VSSFCE Sbjct: 121 HFQRGARITVRVSSVNKMLKLHATDEAVPVTPGIQLVEVTAPATPENYSEVVAAVSSFCE 180 Query: 514 YLAPLLHLSKPGVSAGVVPTXXXXXASLMSDRGGKNL 404 YLAPLLHLSKPGVS GVVPT ASLMSD GG L Sbjct: 181 YLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTTL 217 >ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycine max] gi|255629097|gb|ACU14893.1| unknown [Glycine max] Length = 217 Score = 318 bits (815), Expect = 2e-84 Identities = 158/217 (72%), Positives = 183/217 (84%) Frame = -2 Query: 1054 MECAVEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQ 875 MEC V+GIIETQHVEALEILLQGLCGV +ER RIHE+CLKSGP+LG+V+SEVRLLCDLEQ Sbjct: 1 MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKSGPHLGTVASEVRLLCDLEQ 60 Query: 874 SVPTWTVRHVGGAMRGAGAEQLSVVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSF 695 + P+WTV+HVGGAMRGAGAEQ+SV+VR+MVESK SKN LR FY+LGYKLDHELL+VGFSF Sbjct: 61 AEPSWTVKHVGGAMRGAGAEQISVLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSF 120 Query: 694 HFQKSAQLKVSVTSVHKMPKLHAVEEAIPVTPGIQLVEVTXXXXXXXXXXXXXXVSSFCE 515 +F + AQ+ V+V+S++KM KLHA +EA+PVTPGIQ+VEVT VSSFCE Sbjct: 121 NFHRGAQITVTVSSINKMLKLHATDEAVPVTPGIQMVEVTAPATAETYAEVASAVSSFCE 180 Query: 514 YLAPLLHLSKPGVSAGVVPTXXXXXASLMSDRGGKNL 404 YLAPLLHLSKPG+S GVVPT ASLMSD GG NL Sbjct: 181 YLAPLLHLSKPGISTGVVPTAAAAAASLMSDGGGTNL 217 >ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana] gi|75206349|sp|Q9SJZ6.1|MED18_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 18 gi|4544453|gb|AAD22361.1| expressed protein [Arabidopsis thaliana] gi|117168219|gb|ABK32192.1| At2g22370 [Arabidopsis thaliana] gi|330252204|gb|AEC07298.1| uncharacterized protein [Arabidopsis thaliana] Length = 219 Score = 315 bits (808), Expect = 1e-83 Identities = 154/217 (70%), Positives = 181/217 (83%) Frame = -2 Query: 1054 MECAVEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQ 875 MEC V+GIIETQHVEALEILLQGLCGV +ER R+HELCL+SGPNLG VSSEVRLLCDL+Q Sbjct: 3 MECVVQGIIETQHVEALEILLQGLCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQ 62 Query: 874 SVPTWTVRHVGGAMRGAGAEQLSVVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSF 695 PTWTV+HVGGAMRGAGA+Q+SV+VR M+ESK SKN LR FY+LGYKLDHELLKVGF+F Sbjct: 63 PEPTWTVKHVGGAMRGAGADQISVLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAF 122 Query: 694 HFQKSAQLKVSVTSVHKMPKLHAVEEAIPVTPGIQLVEVTXXXXXXXXXXXXXXVSSFCE 515 HFQ++A + VSV+SV+KMPK+HA++EA+PVTPG+Q+V+VT VSSFCE Sbjct: 123 HFQRTAHISVSVSSVNKMPKVHAIDEAVPVTPGMQIVDVTAPATSENYSEVAAAVSSFCE 182 Query: 514 YLAPLLHLSKPGVSAGVVPTXXXXXASLMSDRGGKNL 404 +LAPL+HLSKP +S GVVPT ASLMSD GG L Sbjct: 183 FLAPLVHLSKPSISTGVVPTAAAAAASLMSDGGGTTL 219 >ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arabidopsis lyrata subsp. lyrata] gi|297326279|gb|EFH56699.1| hypothetical protein ARALYDRAFT_320077 [Arabidopsis lyrata subsp. lyrata] Length = 219 Score = 314 bits (805), Expect = 3e-83 Identities = 154/217 (70%), Positives = 180/217 (82%) Frame = -2 Query: 1054 MECAVEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQ 875 MEC V+GIIETQHVEALEILLQGLCGV +ER R+HELCLKSGPNLG VSSEVRLLCDL+Q Sbjct: 3 MECVVQGIIETQHVEALEILLQGLCGVKRERLRVHELCLKSGPNLGVVSSEVRLLCDLDQ 62 Query: 874 SVPTWTVRHVGGAMRGAGAEQLSVVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSF 695 PTWTV+HVGG MRGAGA+Q+SV+VR M+ESK SKN LR FY+LGYKLDHELLKVGF+F Sbjct: 63 PEPTWTVKHVGGPMRGAGADQISVMVRTMIESKVSKNALRMFYALGYKLDHELLKVGFAF 122 Query: 694 HFQKSAQLKVSVTSVHKMPKLHAVEEAIPVTPGIQLVEVTXXXXXXXXXXXXXXVSSFCE 515 HFQ++A + VSV+SV+KMPK+HA++EA+PVTPG+Q+V+VT VSSFCE Sbjct: 123 HFQRTAHISVSVSSVNKMPKVHAIDEAVPVTPGMQIVDVTAPATPENYSEVAAAVSSFCE 182 Query: 514 YLAPLLHLSKPGVSAGVVPTXXXXXASLMSDRGGKNL 404 +LAPL+HLSKP +S GVVPT ASLMSD GG L Sbjct: 183 FLAPLVHLSKPFISTGVVPTAAAAAASLMSDGGGTTL 219 >gb|AFK42853.1| unknown [Medicago truncatula] Length = 217 Score = 314 bits (804), Expect = 4e-83 Identities = 160/217 (73%), Positives = 178/217 (82%) Frame = -2 Query: 1054 MECAVEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSGPNLGSVSSEVRLLCDLEQ 875 MEC V+GIIETQHVEALEILLQGLCGV +ER RIHELCLK+GP+LG VSSEVRLLCDLEQ Sbjct: 1 MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHELCLKNGPHLGPVSSEVRLLCDLEQ 60 Query: 874 SVPTWTVRHVGGAMRGAGAEQLSVVVRAMVESKASKNVLRFFYSLGYKLDHELLKVGFSF 695 + P+WTVRHVGGAMRGAGA+Q+SV+VR MVESK SKNVLR FY+LGYKLDHELL+VGFSF Sbjct: 61 TEPSWTVRHVGGAMRGAGADQISVLVRTMVESKVSKNVLRMFYTLGYKLDHELLRVGFSF 120 Query: 694 HFQKSAQLKVSVTSVHKMPKLHAVEEAIPVTPGIQLVEVTXXXXXXXXXXXXXXVSSFCE 515 F + AQ+ V V+SV+KM KLHA +EA+PVTPGIQ+VEVT V SFCE Sbjct: 121 KFNRGAQITVRVSSVNKMLKLHATDEAVPVTPGIQMVEVTAPASDENYAEVAAAVQSFCE 180 Query: 514 YLAPLLHLSKPGVSAGVVPTXXXXXASLMSDRGGKNL 404 YLAPLLHLSKPGVS GVVPT ASLMSD GG L Sbjct: 181 YLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTPL 217