BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019372
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610255.1| F-box/LRR-repeat protein [Medicago truncatul...    70   9e-10
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    69   1e-09
ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatul...    69   2e-09
ref|NP_191483.1| putative F-box/LRR-repeat protein [Arabidopsis ...    60   6e-07

>ref|XP_003610255.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355511310|gb|AES92452.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
 Frame = +1

Query: 88  LCSTPSLVDAYVEVNTEY--TPEDFGLYASKLFRQLSKVKFLAVTNVTISTLSRHENFHA 261
           L    S+VDAY+++   Y   P      A +L  +L  VK L +TN TI   S   N   
Sbjct: 201 LVKPTSIVDAYIDLKFSYPENPLHVSHCAMELLSELVSVKSLKLTNNTIERFSYPRNCGH 260

Query: 262 TLPIFQNLIHFELSTEVALGDTGLFMALMKNSPNVEHLVFEKDIFPKIHIDGDRDMPQSV 441
            LP F NL   ++          L + +++ +P +E L   K     +  D +     S+
Sbjct: 261 LLPSFNNLTKLDMILGYFYVSCELLVDILRKTPKLEVLHISKGDCTAL--DNEDLTSDSL 318

Query: 442 PTSFPLRLKSVTFDEFGASKIELFLVKSLLENAMALERMTIYSSEKFAEAREKQVMLWNY 621
           P      LK  +F +F   +IE+ L+K L ENA  LE + I+ S   +   +K   + N+
Sbjct: 319 PCCIKSSLKLCSFSDFDGDEIEIQLLKCLTENATVLEAINIFCSGGLSSNLKKLTDVRNH 378

Query: 622 LRTAHKGSKCCLIDF 666
           +++   GS  C+  F
Sbjct: 379 VQSLGLGS--CVFKF 391


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 18/231 (7%)
 Frame = +1

Query: 25  KIFAENLVHFVYKGGLSNELSLCSTPSLVDAYVEVN---TEYTPEDFGLYASKLFRQLSK 195
           KI A NL+   YK   +    L ++ S+VDA +++     +       ++A +LF +L  
Sbjct: 241 KIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGS 300

Query: 196 VKFLAVTNVTISTLSRHENFHATLPIFQNL----IHFELSTEVALGDTGLFMALMKNSPN 363
           V+ L +++ TI  L+  ++    LP F+NL    +HF+  +   L D      +++ SP 
Sbjct: 301 VESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEVHFDDPSCEVLAD------ILRKSPK 354

Query: 364 VE-------HLV----FEKDIFPKIHIDGDRDMPQSVPTSFPLRLKSVTFDEFGASKIEL 510
           +E       HLV    F    +  + +D +     S+P  F   LKS    +F   + E+
Sbjct: 355 LEFLHIYGVHLVSCSRFSSGSY--LSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEI 412

Query: 511 FLVKSLLENAMALERMTIYSSEKFAEAREKQVMLWNYLRTAHKGSKCCLID 663
            LVK LLEN   L  M IY +   ++  +K   + N L+    GS  C+I+
Sbjct: 413 RLVKFLLENVTLLREMNIYCTGYLSKKSKKLADVRNQLQALGMGS--CVIN 461


>ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512000|gb|AES93623.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 489

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 3/205 (1%)
 Frame = +1

Query: 7   YRDSEMKIFAENLVHFVYKGGLSNELSLCSTPSLVDAYVEVNTEYTPE-DFGLYASKLFR 183
           Y    ++I +  LV F Y G L N+ SL  T S+ +A ++++ ++      G +  KLF 
Sbjct: 267 YHHGLIRILSNELVSFTYDGDLMNDYSLFYTFSVSNATIKLHEQHNNMLHAGHFIYKLFI 326

Query: 184 QLSKVKFLAVTNVTISTLSRHENFHATLPIFQNLIHFELS--TEVALGDTGLFMALMKNS 357
            LS V  L+V++  +  L +     A LP+F NL+   ++  + V L   GL  +L++NS
Sbjct: 327 ALSGVTKLSVSDFALQALCQPLLLAAHLPLFFNLVKLRVTSPSAVDLSCEGLH-SLLRNS 385

Query: 358 PNVEHLVFEKDIFPKIHIDGDRDMPQSVPTSFPLRLKSVTFDEFGASKIELFLVKSLLEN 537
           P +E + F++ I   +  +G  ++   +P  F  +LK +   +F  S  EL  +K LL+ 
Sbjct: 386 PFLEKIEFKEGI--TLAANGG-NLINPLPGCFWTKLKVIKIYDFCGSDGELNAIKFLLQE 442

Query: 538 AMALERMTIYSSEKFAEAREKQVML 612
            + L+ + I  +E   ++ E   ML
Sbjct: 443 TLVLDTLYIQYNESHFDSPEGTKML 467


>ref|NP_191483.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264305|sp|Q9LX47.1|FDL46_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At3g59240
           gi|7801674|emb|CAB91594.1| putative protein [Arabidopsis
           thaliana] gi|332646374|gb|AEE79895.1| putative
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 504

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 19/223 (8%)
 Frame = +1

Query: 40  NLVHFVYKGGLSNELSLCSTPSLVDAYVEVNTEYTPEDFGLY------ASKLFRQLSKVK 201
           NLV+F Y   ++++  + +  SLV+A + +   +       Y      A+ LF  +S V+
Sbjct: 237 NLVYFEYFDLVADKYEVVNFDSLVEASIGLRMRHHQRAHASYGDLVVNATNLFMGISNVR 296

Query: 202 FLAVTNVTISTLSRHENFHATLPIFQNLIHFELSTEVALGDTGLFMALMKNSPNVEHLVF 381
            L + +  +  L+      A +P+F+ LIH  + T+  +G   L  AL+KN PN+E LVF
Sbjct: 297 ILQLFSNALEVLTF---CCAPIPVFKKLIHLTVETDKDVGWESL-PALLKNCPNLETLVF 352

Query: 382 E----KDIFPKIHIDG-----DRDMPQSVPTSFPLRLKSVTFDE----FGASKIELFLVK 522
           +    +        DG      +D+   + +S    LK + F E    FG  + +L LVK
Sbjct: 353 KGLHHRSTSKCQDTDGCLCKSSKDIRSCLSSSPVKVLKILKFGEVASYFGDEEKQLELVK 412

Query: 523 SLLENAMALERMTIYSSEKFAEAREKQVMLWNYLRTAHKGSKC 651
             LE    LE+M ++ + + +E  + Q+   ++L      SKC
Sbjct: 413 YFLETMPNLEQMILHYNTRISEGVKSQL---DWLVPRVSSSKC 452