BLASTX nr result

ID: Coptis21_contig00019371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019371
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   123   2e-26
ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002513461.1| conserved hypothetical protein [Ricinus comm...   112   3e-23
ref|XP_002515544.1| conserved hypothetical protein [Ricinus comm...   111   5e-23
ref|XP_002513460.1| conserved hypothetical protein [Ricinus comm...   109   3e-22

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/115 (49%), Positives = 79/115 (68%)
 Frame = -3

Query: 486 YVTDHVILMDFLINTPEDVTLLQSSGIIVNWLGSKEDVCKMFNRLGKGVITDSEPSHYYS 307
           Y+TD+VILM++LIN+P+DV LL   GII N LG  E V  +F +LGK V+ +S+   + +
Sbjct: 319 YITDYVILMEYLINSPKDVALLSRYGIINNLLGDNEGVSHLFKKLGKEVVFNSDKFQFSN 378

Query: 306 LVQDVNLYCRQQWHVWNQILKTDYLDNPWTIISLSAAVFLLICTSIQAVCSIISV 142
           L +DVN Y + +WH+W   L+ DY +NPW IIS   AV LL  T IQ VCS++S+
Sbjct: 379 LCRDVNKYHKTRWHIWRATLRRDYFNNPWAIISFIGAVLLLFFTLIQTVCSLLSL 433


>ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/115 (46%), Positives = 76/115 (66%)
 Frame = -3

Query: 486 YVTDHVILMDFLINTPEDVTLLQSSGIIVNWLGSKEDVCKMFNRLGKGVITDSEPSHYYS 307
           Y+ D+VI+++ L+NT +DV LL   GI+ NWL   E +  +F+ L K      +  ++  
Sbjct: 296 YINDYVIIINHLVNTAKDVELLVKDGIVENWLWDDEGMSALFHGLVKETFVIVDHFYFSG 355

Query: 306 LVQDVNLYCRQQWHVWNQILKTDYLDNPWTIISLSAAVFLLICTSIQAVCSIISV 142
           LV+++N YCR+ WH W   LK  Y +NPW+IIS  AAV LL+ T+IQAVCSI+SV
Sbjct: 356 LVEELNAYCRKPWHKWQATLKQHYFNNPWSIISFIAAVILLVLTTIQAVCSILSV 410


>ref|XP_002513461.1| conserved hypothetical protein [Ricinus communis]
           gi|223547369|gb|EEF48864.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/117 (47%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
 Frame = -3

Query: 486 YVTDHVILMDFLINTPEDVTLLQSSGIIVNWLGSKEDVCKMFNRLGK-GVITDSEPSHYY 310
           Y  D+  +MD L++ PEDV LL  SGII NWL   +     FN +GK  +I D    ++ 
Sbjct: 322 YANDYFSIMDLLVDVPEDVDLLVQSGIIENWLEDNQAAATFFNNMGKHNLIYDD--FYFS 379

Query: 309 SLVQDVNLYCRQQWHVWNQILKTDYLDNPWTIISLSAAVFLLICTSIQAVCSIISVL 139
            LV D+N YCR  WH W   LK  Y +NPWT+IS++AA FLL+ T IQ VCSI+ V+
Sbjct: 380 GLVGDLNAYCRTPWHNWKASLKQKYFNNPWTMISVAAAGFLLLLTIIQTVCSILQVV 436


>ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis]
           gi|223545488|gb|EEF46993.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 439

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/115 (44%), Positives = 74/115 (64%)
 Frame = -3

Query: 486 YVTDHVILMDFLINTPEDVTLLQSSGIIVNWLGSKEDVCKMFNRLGKGVITDSEPSHYYS 307
           Y++D++++MD LINTP DV +L   GI+   L +  +   +FN L K ++ DS   +Y  
Sbjct: 319 YISDYIVIMDSLINTPHDVEVLVKYGIMKVMLANNVEASTLFNNLAKEILYDSHVFYYSL 378

Query: 306 LVQDVNLYCRQQWHVWNQILKTDYLDNPWTIISLSAAVFLLICTSIQAVCSIISV 142
           L +D+N +C+ +WH W   LK +Y + PWT IS+ A V LL+ T IQAVCSII V
Sbjct: 379 LCEDLNTFCKVRWHRWKATLKHNYFNTPWTAISVIAGVILLVLTFIQAVCSIIQV 433


>ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis]
           gi|223547368|gb|EEF48863.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/116 (43%), Positives = 75/116 (64%)
 Frame = -3

Query: 486 YVTDHVILMDFLINTPEDVTLLQSSGIIVNWLGSKEDVCKMFNRLGKGVITDSEPSHYYS 307
           YV+D++ L+  L+  P+DV LL  +GII NWL + E V  +F +L +  +   +  ++ S
Sbjct: 294 YVSDYISLVSLLVKAPKDVDLLAQNGIIENWLVNSEGVSTLFQKLEQENLLIPDDFYFSS 353

Query: 306 LVQDVNLYCRQQWHVWNQILKTDYLDNPWTIISLSAAVFLLICTSIQAVCSIISVL 139
           LV+++N YC+  W+ W   LK DY + PW +IS+ AA  LLI T IQ+VCSI+ VL
Sbjct: 354 LVEELNSYCKNPWNKWKATLKQDYFNTPWAVISVIAAAILLILTVIQSVCSILQVL 409


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