BLASTX nr result

ID: Coptis21_contig00019349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019349
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21881.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002274918.1| PREDICTED: uncharacterized protein LOC100262...    89   5e-16
emb|CAN78517.1| hypothetical protein VITISV_039749 [Vitis vinifera]    89   5e-16
ref|XP_002327911.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
gb|AAD10690.1| Hypothetical protein [Arabidopsis thaliana]             84   1e-14

>emb|CBI21881.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/64 (73%), Positives = 51/64 (79%), Gaps = 7/64 (10%)
 Frame = +1

Query: 121 LKQLRKTLVPHARPVPNFDSPFLPQKSLKETTKAKSPKLRVLQRKQRR-------TSVAA 279
           LKQLR+TLVPHAR VPNFD PF PQKS KETTKAKSP LRVLQRK+RR       TS AA
Sbjct: 758 LKQLRRTLVPHARAVPNFDRPFCPQKSSKETTKAKSPYLRVLQRKERRKMTLATATSAAA 817

Query: 280 SHMR 291
           ++MR
Sbjct: 818 NNMR 821


>ref|XP_002274918.1| PREDICTED: uncharacterized protein LOC100262517 [Vitis vinifera]
          Length = 805

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/64 (73%), Positives = 51/64 (79%), Gaps = 7/64 (10%)
 Frame = +1

Query: 121 LKQLRKTLVPHARPVPNFDSPFLPQKSLKETTKAKSPKLRVLQRKQRR-------TSVAA 279
           LKQLR+TLVPHAR VPNFD PF PQKS KETTKAKSP LRVLQRK+RR       TS AA
Sbjct: 742 LKQLRRTLVPHARAVPNFDRPFCPQKSSKETTKAKSPYLRVLQRKERRKMTLATATSAAA 801

Query: 280 SHMR 291
           ++MR
Sbjct: 802 NNMR 805


>emb|CAN78517.1| hypothetical protein VITISV_039749 [Vitis vinifera]
          Length = 941

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/64 (73%), Positives = 51/64 (79%), Gaps = 7/64 (10%)
 Frame = +1

Query: 121  LKQLRKTLVPHARPVPNFDSPFLPQKSLKETTKAKSPKLRVLQRKQRR-------TSVAA 279
            LKQLR+TLVPHAR VPNFD PF PQKS KETTKAKSP LRVLQRK+RR       TS AA
Sbjct: 878  LKQLRRTLVPHARAVPNFDRPFCPQKSSKETTKAKSPYLRVLQRKERRKMTLATATSAAA 937

Query: 280  SHMR 291
            ++MR
Sbjct: 938  NNMR 941


>ref|XP_002327911.1| predicted protein [Populus trichocarpa] gi|222837320|gb|EEE75699.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 8/65 (12%)
 Frame = +1

Query: 121 LKQLRKTLVPHARPVPNFDSPFLPQKSLKETTKAKSPKLRVLQRKQRR--------TSVA 276
           LKQLR+T+VPHARPVPNF+ PF PQKS KE TKAKSP LRVLQR++RR        +S A
Sbjct: 747 LKQLRRTMVPHARPVPNFNHPFCPQKSSKEATKAKSPNLRVLQRRERRKMMMVNAASSAA 806

Query: 277 ASHMR 291
           AS MR
Sbjct: 807 ASGMR 811


>gb|AAD10690.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 743

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = +1

Query: 121 LKQLRKTLVPHARPVPNFDSPFLPQKSLKETTKAKSPKLRVLQRKQRRTSVA 276
           LKQ+RKT+VPHARPVPNF+ PFLPQKS K TTKAKSP LRV++R +RRT +A
Sbjct: 676 LKQMRKTMVPHARPVPNFNKPFLPQKSNKGTTKAKSPNLRVIKRTERRTMMA 727


Top