BLASTX nr result
ID: Coptis21_contig00019347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00019347
(1342 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40445.3| unnamed protein product [Vitis vinifera] 360 5e-97
ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1... 355 1e-95
ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2... 342 1e-91
ref|XP_002302611.1| predicted protein [Populus trichocarpa] gi|2... 310 5e-82
ref|XP_002511931.1| Structural maintenance of chromosome 1 prote... 302 1e-79
>emb|CBI40445.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 360 bits (924), Expect = 5e-97
Identities = 205/423 (48%), Positives = 284/423 (67%), Gaps = 16/423 (3%)
Frame = +2
Query: 122 MWSTIANLKENLNQIALDVHGXXXXXXXXXXXXXXXXXXXTFESKSNGRYSPSLLRTPPS 301
MWSTIANLKENLN+IALDVH + + + +Y+
Sbjct: 1 MWSTIANLKENLNKIALDVHDDDDEELQIHAPVVAAEDPSVSDRRFSHKYA--------H 52
Query: 302 SNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQISRLQEEKGSLRKN 481
SNGI S + EIEQYKA+++RLQ SEAEIKALS+NYAALLK+KE+QIS+L +E GSL+ N
Sbjct: 53 SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKHN 112
Query: 482 LEAN--VWSASTTESPRTLTSKQNFIKATNEKSPGKPYGNANQLRTNPSLNHTYKGVVAN 655
L++ V SAS +E+ RT T+ + +K + ++SP + + Q++ + N + GVV
Sbjct: 113 LDSTNAVLSASRSENSRTSTNSLHALKGSGDQSPSRQHKLTAQVKGRSTGNQMHNGVVKQ 172
Query: 656 PDALNNGIQ--------------LNGHHQGNEQELASVLEECSRSLEAMQAKHDSEIKEL 793
D L+NGI N + +GNE+ELA +LEE +RSL A+QA H+ +IK+L
Sbjct: 173 -DGLSNGIAHAVQPDAAQSKMETKNSNLKGNEKELADLLEEKNRSLAALQATHELQIKQL 231
Query: 794 RMELTKERDNSANIQLKLQEEDKMNRTSQKELRTLKSNKDQHAREMKEMQNELNEKISEI 973
RMEL KERD NI LKLQEE+K+N + ++L +LK +K++ + EM ++++ELNEK S I
Sbjct: 232 RMELDKERDKLKNINLKLQEENKLNHSFLEDLNSLKMDKEKTSMEMNKIRSELNEKRSVI 291
Query: 974 RRLQMELTRRGGGEVDETSESLKTVIRNLEQENRILKMEKGEFEAALKVNAASSVDESVP 1153
+RLQMEL RR E ++ ESLK VI NLE+EN LK EK E E AL+++ +S D+ P
Sbjct: 292 QRLQMELNRREEEEANDMVESLKGVIANLEKENSCLKREKDEMEVALRMSKKASTDKISP 351
Query: 1154 NDLVVTNKHSSNLNEVNSSKTFPGKEELEQSIQKLEKDLKGACQARDKAVQQLSRLKQHL 1333
+ + KH S+LNEVNSS +FPGKEE++ S+Q++E+DLK ACQ RDKA+Q+L+RLKQHL
Sbjct: 352 DVSDASEKHFSSLNEVNSSGSFPGKEEMQISLQQVERDLKEACQERDKALQELTRLKQHL 411
Query: 1334 LDK 1342
L+K
Sbjct: 412 LEK 414
>ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1 [Vitis vinifera]
Length = 790
Score = 355 bits (912), Expect = 1e-95
Identities = 205/424 (48%), Positives = 284/424 (66%), Gaps = 17/424 (4%)
Frame = +2
Query: 122 MWSTIANLKENLNQIALDVHGXXXXXXXXXXXXXXXXXXXTFESKSNGRYSPSLLRTPPS 301
MWSTIANLKENLN+IALDVH + + + +Y+
Sbjct: 1 MWSTIANLKENLNKIALDVHDDDDEELQIHAPVVAAEDPSVSDRRFSHKYA--------H 52
Query: 302 SNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQISRLQEEKGSLRKN 481
SNGI S + EIEQYKA+++RLQ SEAEIKALS+NYAALLK+KE+QIS+L +E GSL+ N
Sbjct: 53 SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKHN 112
Query: 482 LEAN--VWSASTTESPRTLTSKQNFIKATNEKSPGKPYGNANQLRTNPSLNHTYKGVVAN 655
L++ V SAS +E+ RT T+ + +K + ++SP + + Q++ + N + GVV
Sbjct: 113 LDSTNAVLSASRSENSRTSTNSLHALKGSGDQSPSRQHKLTAQVKGRSTGNQMHNGVVKQ 172
Query: 656 PDALNNGIQ--------------LNGHHQGNEQELASVLEECSRSLEAMQAKHDSEIKEL 793
D L+NGI N + +GNE+ELA +LEE +RSL A+QA H+ +IK+L
Sbjct: 173 -DGLSNGIAHAVQPDAAQSKMETKNSNLKGNEKELADLLEEKNRSLAALQATHELQIKQL 231
Query: 794 RMELTKERDNSANIQLKLQEEDKMNRTSQKELRTLKSNKDQHAREMKEMQNELNEKISEI 973
RMEL KERD NI LKLQEE+K+N + ++L +LK +K++ + EM ++++ELNEK S I
Sbjct: 232 RMELDKERDKLKNINLKLQEENKLNHSFLEDLNSLKMDKEKTSMEMNKIRSELNEKRSVI 291
Query: 974 RRLQMELTRRGGGEVDETSESLKTVIRNLEQENRILKMEKGEFEAALKVNAASSVDESVP 1153
+RLQMEL RR E ++ ESLK VI NLE+EN LK EK E E AL+++ +S D+ P
Sbjct: 292 QRLQMELNRREEEEANDMVESLKGVIANLEKENSCLKREKDEMEVALRMSKKASTDKISP 351
Query: 1154 NDLVVTNKHSSNLNE-VNSSKTFPGKEELEQSIQKLEKDLKGACQARDKAVQQLSRLKQH 1330
+ + KH S+LNE VNSS +FPGKEE++ S+Q++E+DLK ACQ RDKA+Q+L+RLKQH
Sbjct: 352 DVSDASEKHFSSLNEQVNSSGSFPGKEEMQISLQQVERDLKEACQERDKALQELTRLKQH 411
Query: 1331 LLDK 1342
LL+K
Sbjct: 412 LLEK 415
>ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2 [Vitis vinifera]
Length = 776
Score = 342 bits (878), Expect = 1e-91
Identities = 199/423 (47%), Positives = 277/423 (65%), Gaps = 16/423 (3%)
Frame = +2
Query: 122 MWSTIANLKENLNQIALDVHGXXXXXXXXXXXXXXXXXXXTFESKSNGRYSPSLLRTPPS 301
MWSTIANLKENLN+IALDVH + + + +Y+
Sbjct: 1 MWSTIANLKENLNKIALDVHDDDDEELQIHAPVVAAEDPSVSDRRFSHKYA--------H 52
Query: 302 SNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQISRLQEEKGSLRKN 481
SNGI S + EIEQYKA+++RLQ SEAEIKALS+NYAALLK+KE+QIS+L +E GSL+ N
Sbjct: 53 SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKHN 112
Query: 482 LEAN--VWSASTTESPRTLTSKQNFIKATNEKSPGKPYGNANQLRTNPSLNHTYKGVVAN 655
L++ V SAS +E+ RT T+ + +K + ++SP + + Q++ + N + GVV
Sbjct: 113 LDSTNAVLSASRSENSRTSTNSLHALKGSGDQSPSRQHKLTAQVKGRSTGNQMHNGVVKQ 172
Query: 656 PDALNNGIQ--------------LNGHHQGNEQELASVLEECSRSLEAMQAKHDSEIKEL 793
D L+NGI N + +GNE+ELA +LEE +RSL A+QA H+ +IK+L
Sbjct: 173 -DGLSNGIAHAVQPDAAQSKMETKNSNLKGNEKELADLLEEKNRSLAALQATHELQIKQL 231
Query: 794 RMELTKERDNSANIQLKLQEEDKMNRTSQKELRTLKSNKDQHAREMKEMQNELNEKISEI 973
RMEL KERD NI LKLQEE+K+N + ++L +LK +K++ + EM ++++ELNEK S I
Sbjct: 232 RMELDKERDKLKNINLKLQEENKLNHSFLEDLNSLKMDKEKTSMEMNKIRSELNEKRSVI 291
Query: 974 RRLQMELTRRGGGEVDETSESLKTVIRNLEQENRILKMEKGEFEAALKVNAASSVDESVP 1153
+RLQMEL RR E ++ ESLK VI NLE+EN LK EK E E AL+++ +S D+ P
Sbjct: 292 QRLQMELNRREEEEANDMVESLKGVIANLEKENSCLKREKDEMEVALRMSKKASTDKISP 351
Query: 1154 NDLVVTNKHSSNLNEVNSSKTFPGKEELEQSIQKLEKDLKGACQARDKAVQQLSRLKQHL 1333
++VNSS +FPGKEE++ S+Q++E+DLK ACQ RDKA+Q+L+RLKQHL
Sbjct: 352 -------------DQVNSSGSFPGKEEMQISLQQVERDLKEACQERDKALQELTRLKQHL 398
Query: 1334 LDK 1342
L+K
Sbjct: 399 LEK 401
>ref|XP_002302611.1| predicted protein [Populus trichocarpa] gi|222844337|gb|EEE81884.1|
predicted protein [Populus trichocarpa]
Length = 734
Score = 310 bits (794), Expect = 5e-82
Identities = 185/411 (45%), Positives = 260/411 (63%), Gaps = 4/411 (0%)
Frame = +2
Query: 122 MWSTIANLKENLNQIALDVHGXXXXXXXXXXXXXXXXXXXTFESKSNGRYSPSLLRTPPS 301
MWS+I NLK NLN+IALDVH + S+ +
Sbjct: 1 MWSSIENLKLNLNKIALDVHDDDEEELEIHASSNGYDSPVSDRRNSHRFAHSKSVSRSLG 60
Query: 302 SNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQISRLQEEKGSLRKN 481
+NG S + EIEQYKAQ++RLQ SE EIKALS+NYAA+LKEKE+QISRL +E GSL++N
Sbjct: 61 ANGNGSPYNFEIEQYKAQIKRLQESEGEIKALSINYAAILKEKEDQISRLNQENGSLKQN 120
Query: 482 LEAN--VWSASTTESPRTLTSKQNFIKATNEKSPGKPYGNANQLRTNPSLNHTYKGVVAN 655
L+A + S TE R TS N IK + ++SP +P+ +ANQ + N N G+
Sbjct: 121 LDATKEALNVSRTEHLRISTSSINAIKGSGDQSPKRPHKSANQAK-NRGGNQIQNGLFPK 179
Query: 656 PDALNNGIQLNGHHQGNEQELASVLEECSRSLEAMQAKHDSEIKELRMELTKERDNSANI 835
D NGI EL +LEE +RSL AMQA H+ +IKELR EL KE D ANI
Sbjct: 180 YDGTGNGIL--------HDELVDLLEEKNRSLAAMQATHELQIKELRTELEKEHDKLANI 231
Query: 836 QLKLQEEDKMNRTSQKELRTLKSNKDQHAREMKEMQNELNEKISEIRRLQMELTRRGGGE 1015
+LKLQEE +N++ Q+ELR LK ++ + + ++ ++ +ELNEK SEIRRLQMEL+R +
Sbjct: 232 ELKLQEEQSLNKSFQEELRVLKIDRHKTSMDVNKIHDELNEKTSEIRRLQMELSRWEDAD 291
Query: 1016 VDETSESLKTVIRNLEQENRILKMEKGEFEAALKVNAASSVDESVPNDLVVTNK--HSSN 1189
+++ ++LK VI LE+EN LKM K E EAAL+ + SS D++ P+++++ + +
Sbjct: 292 PNDSVKNLKRVIATLEKENVNLKMAKNELEAALQRSRNSSPDKTSPDEVILLDSLFLHAL 351
Query: 1190 LNEVNSSKTFPGKEELEQSIQKLEKDLKGACQARDKAVQQLSRLKQHLLDK 1342
+ + +S+ T P KEE+E +QKLE+DLK C +DKA+++L+RLKQHLL+K
Sbjct: 352 VWKADSTTTSPKKEEVELLLQKLERDLKETCHEKDKALRELARLKQHLLEK 402
>ref|XP_002511931.1| Structural maintenance of chromosome 1 protein, putative [Ricinus
communis] gi|223549111|gb|EEF50600.1| Structural
maintenance of chromosome 1 protein, putative [Ricinus
communis]
Length = 755
Score = 302 bits (774), Expect = 1e-79
Identities = 184/409 (44%), Positives = 253/409 (61%), Gaps = 2/409 (0%)
Frame = +2
Query: 122 MWSTIANLKENLNQIALDVHGXXXXXXXXXXXXXXXXXXXTFESKSNGRYSPSLLRTPPS 301
MWS+I LK+NLN+IALDVH + + +S LR+P
Sbjct: 1 MWSSIEALKQNLNKIALDVHDDGDEEELEIYASINDGDYSDRRNSHSFAHSKPALRSP-I 59
Query: 302 SNGIHSRFKDEIEQYKAQVQRLQTSEAEIKALSVNYAALLKEKEEQISRLQEEKGSLRKN 481
+NGI S F EIEQYKA+++RLQ SE+EIKALSVNYAALLKEKE+QISRL +E GSL+ N
Sbjct: 60 ANGIDSSFHSEIEQYKAEIRRLQESESEIKALSVNYAALLKEKEDQISRLNQENGSLKHN 119
Query: 482 LEAN--VWSASTTESPRTLTSKQNFIKATNEKSPGKPYGNANQLRTNPSLNHTYKGVVAN 655
L+A + S +E+P+ T+ + IK ++SP + + +A Q ++ N GV +
Sbjct: 120 LDATEEALNVSRSENPKASTNNTHVIKGAVDQSPNQQHKSATQAKSRNVGNQMQNGVFSK 179
Query: 656 PDALNNGIQLNGHHQGNEQELASVLEECSRSLEAMQAKHDSEIKELRMELTKERDNSANI 835
E ELA +LEE +R + AMQA H+ +IK+LR+EL KERD N+
Sbjct: 180 ----------------QEGELADLLEEKNRLVAAMQATHELQIKQLRLELEKERDKVTNV 223
Query: 836 QLKLQEEDKMNRTSQKELRTLKSNKDQHAREMKEMQNELNEKISEIRRLQMELTRRGGGE 1015
Q+KLQEE K+N + Q+++RTLK + + + EM +++NELNEKISEIRRLQ+ L+RR
Sbjct: 224 QIKLQEEHKLNESFQEQVRTLKMGESKTSMEMSKIRNELNEKISEIRRLQIILSRREDEN 283
Query: 1016 VDETSESLKTVIRNLEQENRILKMEKGEFEAALKVNAASSVDESVPNDLVVTNKHSSNLN 1195
D+T + LK V+ LE+EN LK+ K E EAAL+ + +S E +S
Sbjct: 284 ADDTVKGLKRVLATLEKENANLKIAKNELEAALETSRNASPGE------------TSLDG 331
Query: 1196 EVNSSKTFPGKEELEQSIQKLEKDLKGACQARDKAVQQLSRLKQHLLDK 1342
+V+ S +F K E+E S+QKLEK+LK RDKA+Q+LSRLKQHLLDK
Sbjct: 332 KVDPSGSFNAK-EMESSLQKLEKELKETRHERDKALQELSRLKQHLLDK 379