BLASTX nr result
ID: Coptis21_contig00019346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00019346
(716 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15033.3| unnamed protein product [Vitis vinifera] 158 3e-37
emb|CAN63572.1| hypothetical protein VITISV_037238 [Vitis vinifera] 157 4e-37
ref|XP_003601261.1| Serine/threonine protein kinase ATM [Medicag... 139 8e-31
ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arab... 138 1e-30
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara... 136 4e-30
>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
Length = 3085
Score = 158 bits (399), Expect(2) = 3e-37
Identities = 89/187 (47%), Positives = 113/187 (60%), Gaps = 13/187 (6%)
Frame = -1
Query: 677 GDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLKDGPNLDREYMESIHSAVH 498
GDFPDN+R++ V+G + I+S + DEG I+ KLI+CIN +LLKDGPNL + +E IH+AV
Sbjct: 207 GDFPDNLREDAVKGFIGIFSFLRDEGKIARKLIECINIFLLKDGPNLGCQCLE-IHNAVQ 265
Query: 497 GFAFRNWPKIQNLGWKDAVILYARLQLNLIRNATDGVNKF*MLFVRN*IKATQPTLVSQR 318
F R+W + G KDAVI YARLQLNL R A DG L + Q + S
Sbjct: 266 QFVLRSWLTSHDRGLKDAVISYARLQLNLTRGAADGSPLVEQLLDVVGRELDQTNISSTS 325
Query: 317 -------------GMTNSQIQLMELAAFVFFKACVNTTKVPSSEKRTKREIAVVCLRQGL 177
+T+SQ L+ELAA VF++AC N K PS+ KR KRE A R+GL
Sbjct: 326 VPWSDTTKDDRLGTLTSSQCGLVELAALVFYRACANPLKAPSTAKRAKREHAAAYFREGL 385
Query: 176 MDGKWLW 156
M GKWLW
Sbjct: 386 MKGKWLW 392
Score = 23.5 bits (49), Expect(2) = 3e-37
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 715 ELVNCISTLHSLLE 674
E+ C+ TLHSLLE
Sbjct: 190 EVFRCVLTLHSLLE 203
>emb|CAN63572.1| hypothetical protein VITISV_037238 [Vitis vinifera]
Length = 432
Score = 157 bits (398), Expect(2) = 4e-37
Identities = 89/187 (47%), Positives = 113/187 (60%), Gaps = 13/187 (6%)
Frame = -1
Query: 677 GDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLKDGPNLDREYMESIHSAVH 498
GDFPDN+R++ V+G + I+S + DEG I+ KLI+CIN +LLKDGPNL + +E IH+AV
Sbjct: 207 GDFPDNLREDAVKGFIGIFSFLRDEGKIARKLIECINIFLLKDGPNLGCQCLE-IHNAVQ 265
Query: 497 GFAFRNWPKIQNLGWKDAVILYARLQLNLIRNATDGVNKF*MLFVRN*IKATQPTLVSQR 318
F R+W + G KDAVI YARLQLNL R A DG L + Q + S
Sbjct: 266 QFVXRSWLTSHDRGLKDAVISYARLQLNLTRGAADGSPLVEQLLDVVGRELDQTNISSTS 325
Query: 317 -------------GMTNSQIQLMELAAFVFFKACVNTTKVPSSEKRTKREIAVVCLRQGL 177
+T+SQ L+ELAA VF++AC N K PS+ KR KRE A R+GL
Sbjct: 326 VPWSDTTKDDRLGTLTSSQCGLVELAALVFYRACANPLKAPSTAKRAKREHAAAYFREGL 385
Query: 176 MDGKWLW 156
M GKWLW
Sbjct: 386 MKGKWLW 392
Score = 23.5 bits (49), Expect(2) = 4e-37
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 715 ELVNCISTLHSLLE 674
E+ C+ TLHSLLE
Sbjct: 190 EVFRCVLTLHSLLE 203
>ref|XP_003601261.1| Serine/threonine protein kinase ATM [Medicago truncatula]
gi|355490309|gb|AES71512.1| Serine/threonine protein
kinase ATM [Medicago truncatula]
Length = 641
Score = 139 bits (349), Expect = 8e-31
Identities = 79/193 (40%), Positives = 114/193 (59%), Gaps = 19/193 (9%)
Frame = -1
Query: 677 GDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLKDGPNLDREYMESIHSAVH 498
GD+P N+R++I +G + I S + +EG +S KL++CINTYLL DGPNL + +E IH A+
Sbjct: 247 GDYPVNLREDIAKGFVRICSFIREEGKVSRKLVECINTYLLNDGPNLGCQLLE-IHKAIQ 305
Query: 497 GFAFRNWPKIQNLGWKDAVILYARLQLNLIRNATDG---VNKF*MLFVRN*IKATQPTLV 327
F F W + KD+++ YAR QLNL R A D V + + ++ + + +
Sbjct: 306 QFLFHCWLTTHDRVLKDSLMFYARTQLNLTRGAADRCLLVEQLLDVIYKDLDQGSMSSTS 365
Query: 326 SQRG----------MTNSQIQLMELAAFVFFK------ACVNTTKVPSSEKRTKREIAVV 195
RG +++SQ L+ELAA +F++ AC+NTT+ SEKR KRE A V
Sbjct: 366 MPRGDGNKDDKLGTLSSSQCGLVELAAVLFYRVATRNSACLNTTRASPSEKRVKREPAAV 425
Query: 194 CLRQGLMDGKWLW 156
LR+ LM GKWLW
Sbjct: 426 VLREALMKGKWLW 438
>ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp.
lyrata] gi|297321720|gb|EFH52141.1| hypothetical protein
ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata]
Length = 3832
Score = 138 bits (348), Expect = 1e-30
Identities = 81/186 (43%), Positives = 112/186 (60%), Gaps = 12/186 (6%)
Frame = -1
Query: 677 GDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLKDGPNLDREYMESIHSAVH 498
GDFPD++R+EIV GL+ I+S V DEG +S KLI+C+NT+LLKDGPNL E IH+AV
Sbjct: 996 GDFPDDLREEIVNGLIHIFSSVRDEGKLSRKLIECVNTFLLKDGPNLGSLSFE-IHNAVE 1054
Query: 497 GFAFRNWPKIQNLGWKDAVILYARLQLNLIRNATDG---VNKF*MLFVRN*IKATQPTLV 327
F FR W + K+ ++ Y RLQLNL R +++ V + + R + T
Sbjct: 1055 QFVFRCWLTTHDKNLKEILVSYGRLQLNLTRGSSESSSLVEQLLDVVTRELDLGSSSTSA 1114
Query: 326 S--------QRGMTNS-QIQLMELAAFVFFKACVNTTKVPSSEKRTKREIAVVCLRQGLM 174
S + G NS Q L+ELAA VF++ACVNT++ SEKR +R+ + + L
Sbjct: 1115 SWGDTTKDEKLGALNSYQNSLVELAAHVFYRACVNTSRPSMSEKRARRQHIAMRMVDALT 1174
Query: 173 DGKWLW 156
+GKWLW
Sbjct: 1175 EGKWLW 1180
>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
Length = 3856
Score = 136 bits (343), Expect = 4e-30
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 12/186 (6%)
Frame = -1
Query: 677 GDFPDNIRKEIVEGLLAIWSLVSDEGNISHKLIKCINTYLLKDGPNLDREYMESIHSAVH 498
GDFPD++R+EIV GL+ I+S V DEG +S KLI+C+NT+LLKDGPNL +E IH+AV
Sbjct: 1018 GDFPDDLREEIVNGLIHIFSSVRDEGKLSRKLIECVNTFLLKDGPNLGSLSLE-IHNAVE 1076
Query: 497 GFAFRNWPKIQNLGWKDAVILYARLQLNLIRNATDG---VNKF*MLFVRN*IKATQPTLV 327
F FR W + K+ ++ Y RLQLNL R++++ V + + R + +
Sbjct: 1077 QFVFRCWLTTHDKNLKEILVSYGRLQLNLTRDSSESSSLVEQLLDVVTRELDLGSSSSSA 1136
Query: 326 SQRGMTNS---------QIQLMELAAFVFFKACVNTTKVPSSEKRTKREIAVVCLRQGLM 174
S T Q L+ELAA VF++ACVNT++ SEKR +R+ + + L
Sbjct: 1137 SWGDTTKDEKLGALSSYQNSLVELAAHVFYRACVNTSRPSLSEKRARRQHIAMRMVDALT 1196
Query: 173 DGKWLW 156
+GKWLW
Sbjct: 1197 EGKWLW 1202