BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019340
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   195   4e-48
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-45
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi...   184   6e-45

>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  195 bits (495), Expect = 4e-48
 Identities = 93/126 (73%), Positives = 111/126 (88%)
 Frame = +1

Query: 1   DGIQSLFEEMIKECSNDSMSLMSAHSRVIQHLARAEKLEVSFCCFKKIRDSGCKIDTPTY 180
           DGIQSLF+EM+++ S   +S + A++RVIQHLA+AEKLE+SFCCFKK++DSGCKIDT TY
Sbjct: 232 DGIQSLFDEMVQDSSKGGISSVYAYNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTY 291

Query: 181 NSLITLFLNKGLPYKAFEIYETMEEARCSLDVSTYELMIPCLAKSGRLDSALKLFQEMKE 360
           N+LIT FLNKGLPYKAFEIYE+M+ A+CSLD STYELMIP LAKSGRLD A KLFQEMKE
Sbjct: 292 NALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKE 351

Query: 361 KGFRPN 378
           +  RP+
Sbjct: 352 RKIRPS 357


>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
           gi|449490234|ref|XP_004158545.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
          Length = 823

 Score =  193 bits (490), Expect = 1e-47
 Identities = 93/125 (74%), Positives = 109/125 (87%)
 Frame = +1

Query: 1   DGIQSLFEEMIKECSNDSMSLMSAHSRVIQHLARAEKLEVSFCCFKKIRDSGCKIDTPTY 180
           D IQ LF+E++++ S+D     SA++RVIQ+LA+AEKLEVSFCCFKKI DSG K+DT TY
Sbjct: 209 DAIQLLFDEVVRDLSSDETVSFSAYNRVIQYLAKAEKLEVSFCCFKKIHDSGFKVDTQTY 268

Query: 181 NSLITLFLNKGLPYKAFEIYETMEEARCSLDVSTYELMIPCLAKSGRLDSALKLFQEMKE 360
           NSLITLFLNKGLPYKAFEIYE+M  A CSLD ST+ELMIPCLAKSGRLD+A+KLFQEMKE
Sbjct: 269 NSLITLFLNKGLPYKAFEIYESMAGAECSLDASTFELMIPCLAKSGRLDAAMKLFQEMKE 328

Query: 361 KGFRP 375
           K +RP
Sbjct: 329 KKYRP 333


>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/126 (75%), Positives = 111/126 (88%)
 Frame = +1

Query: 1   DGIQSLFEEMIKECSNDSMSLMSAHSRVIQHLARAEKLEVSFCCFKKIRDSGCKIDTPTY 180
           DGIQSLF+EM+ + S  S +  SA++RV+++LA+AEKLEVSFCCFKK++DSGCKIDT TY
Sbjct: 172 DGIQSLFDEMVCD-SIKSATQFSAYNRVLKYLAKAEKLEVSFCCFKKVQDSGCKIDTETY 230

Query: 181 NSLITLFLNKGLPYKAFEIYETMEEARCSLDVSTYELMIPCLAKSGRLDSALKLFQEMKE 360
           N L+ LFLNKGLPYKAFEIYETME A CSLDVSTYELMIP LAKSGRLD+A KLFQEMKE
Sbjct: 231 NILMKLFLNKGLPYKAFEIYETMEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQEMKE 290

Query: 361 KGFRPN 378
           + FRP+
Sbjct: 291 RNFRPS 296



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/125 (28%), Positives = 64/125 (51%)
 Frame = +1

Query: 1   DGIQSLFEEMIKECSNDSMSLMSAHSRVIQHLARAEKLEVSFCCFKKIRDSGCKIDTPTY 180
           D    LF+EM +     S+ + S+   ++  + +A +LE S   + +++  G +     Y
Sbjct: 279 DAAFKLFQEMKERNFRPSLGIFSS---LVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMY 335

Query: 181 NSLITLFLNKGLPYKAFEIYETMEEARCSLDVSTYELMIPCLAKSGRLDSALKLFQEMKE 360
            SLI  +   G    A  +++ M+ A    +   Y L+I   AKSG+LD A+ +F++M++
Sbjct: 336 VSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEK 395

Query: 361 KGFRP 375
            GF P
Sbjct: 396 AGFLP 400


>ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Glycine max]
          Length = 752

 Score =  186 bits (473), Expect = 1e-45
 Identities = 93/125 (74%), Positives = 111/125 (88%)
 Frame = +1

Query: 1   DGIQSLFEEMIKECSNDSMSLMSAHSRVIQHLARAEKLEVSFCCFKKIRDSGCKIDTPTY 180
           +GIQ LF+EM+ + S D +SL +A +RVI++LA+AEKLEVSFCCFKKI ++GCK+DT TY
Sbjct: 139 EGIQLLFDEMVGD-SADGVSLFAACNRVIRYLAKAEKLEVSFCCFKKILNAGCKVDTETY 197

Query: 181 NSLITLFLNKGLPYKAFEIYETMEEARCSLDVSTYELMIPCLAKSGRLDSALKLFQEMKE 360
           NSLITLFLNKGLPYKAFE+YE+ME+A CSLD STYELMIP LAKSGRLD+A KLFQEMK 
Sbjct: 198 NSLITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKV 257

Query: 361 KGFRP 375
           +GFRP
Sbjct: 258 RGFRP 262


>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Vitis vinifera]
          Length = 844

 Score =  184 bits (467), Expect = 6e-45
 Identities = 91/127 (71%), Positives = 109/127 (85%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1   DGIQSLFEEMIKECS-NDSMSLMSAHSRVIQHLARAEKLEVSFCCFKKIRDSGCKIDTPT 177
           D IQSLF+EMI++   N+ +S + A ++V++ LA+AEKLEV+FCCFKK++DSGCKIDT T
Sbjct: 227 DAIQSLFDEMIRDSGDNNGVSSVIACNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTAT 286

Query: 178 YNSLITLFLNKGLPYKAFEIYETMEEARCSLDVSTYELMIPCLAKSGRLDSALKLFQEMK 357
           YNSLITLFLNKGLPYKAFE+YE+ME A C LD STYELMIP LAKSGRLD+A KLFQEMK
Sbjct: 287 YNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMK 346

Query: 358 EKGFRPN 378
           EK  RP+
Sbjct: 347 EKNLRPS 353



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/125 (25%), Positives = 66/125 (52%)
 Frame = +1

Query: 1   DGIQSLFEEMIKECSNDSMSLMSAHSRVIQHLARAEKLEVSFCCFKKIRDSGCKIDTPTY 180
           D    LF+EM ++    S  + ++   ++  + +A +L+ S   + +++  G +     Y
Sbjct: 336 DAAFKLFQEMKEKNLRPSFLVFAS---LVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMY 392

Query: 181 NSLITLFLNKGLPYKAFEIYETMEEARCSLDVSTYELMIPCLAKSGRLDSALKLFQEMKE 360
            SLI  F+  G    A  I++ M++A    +   Y +++   AKSG+L++A+ +F +M++
Sbjct: 393 VSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEK 452

Query: 361 KGFRP 375
            GF P
Sbjct: 453 AGFLP 457