BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019339
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   233   4e-59
ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containi...   221   1e-55
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   220   2e-55
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi...   218   7e-55
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...   214   2e-53

>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  233 bits (593), Expect = 4e-59
 Identities = 106/152 (69%), Positives = 129/152 (84%)
 Frame = +1

Query: 247 NVLTRNFSSGDNGDKVSAEFTEEIVYLDESGGVIFKGKGVRSVEPGVDDHIMVGGVKKPF 426
           N   RN+ +G NG+  S E+TE+I YLDESG VI+ GKG+RSVEPGVDDH+M+GG+KKP 
Sbjct: 28  NSFVRNYCAGKNGEAGSGEWTEDIEYLDESGSVIYSGKGIRSVEPGVDDHVMIGGLKKPI 87

Query: 427 SNAAAVSKVVEIVKRWKWGPEMETQLDKLHFVPNMSHVNQAFKEIGETDASLSLFRWAKR 606
            NA+AV+K+VE+VKRWKWGPE+ETQLDKL FVPNM+HV QA K I E+DA LSLF+WAKR
Sbjct: 88  LNASAVAKIVEVVKRWKWGPELETQLDKLQFVPNMTHVVQALKIINESDALLSLFKWAKR 147

Query: 607 QSWYVPNDDIYVLLFDRLNLIRDYDGIQSLFE 702
           Q+WYVPND+ YV+LFD LN  RD+DGIQSLF+
Sbjct: 148 QTWYVPNDECYVMLFDGLNQSRDFDGIQSLFD 179


>ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Glycine max]
          Length = 752

 Score =  221 bits (562), Expect = 1e-55
 Identities = 101/134 (75%), Positives = 119/134 (88%)
 Frame = +1

Query: 301 EFTEEIVYLDESGGVIFKGKGVRSVEPGVDDHIMVGGVKKPFSNAAAVSKVVEIVKRWKW 480
           E+TEEI YLDESGGVI+KGKGVRSVEPGVDDH+MVG VKKPF NA AV+K+VE+VKRWKW
Sbjct: 13  EWTEEIEYLDESGGVIYKGKGVRSVEPGVDDHVMVGEVKKPFVNALAVAKIVEVVKRWKW 72

Query: 481 GPEMETQLDKLHFVPNMSHVNQAFKEIGETDASLSLFRWAKRQSWYVPNDDIYVLLFDRL 660
           GPE++TQLDKL FVPNM+H+ QA K +G+ DA LSLFRWAKRQ+WYVP+DD YV+LFD L
Sbjct: 73  GPELDTQLDKLQFVPNMTHIAQALKVVGDVDACLSLFRWAKRQAWYVPSDDCYVMLFDGL 132

Query: 661 NLIRDYDGIQSLFE 702
           N  RD++GIQ LF+
Sbjct: 133 NQKRDFEGIQLLFD 146


>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  220 bits (561), Expect = 2e-55
 Identities = 102/153 (66%), Positives = 127/153 (83%)
 Frame = +1

Query: 244 NNVLTRNFSSGDNGDKVSAEFTEEIVYLDESGGVIFKGKGVRSVEPGVDDHIMVGGVKKP 423
           ++   RN+ SG+  +  SA++TE+I YLDESG VI+ GKG+RSVEPG+DDH+MVGG+KKP
Sbjct: 87  DSYFARNYCSGNINEGGSAKWTEDIEYLDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKP 146

Query: 424 FSNAAAVSKVVEIVKRWKWGPEMETQLDKLHFVPNMSHVNQAFKEIGETDASLSLFRWAK 603
           F N AAV+K+VEIVKRWKWGPE+ETQLDKL FVP+M+HV QA K I + D  LSLF+WAK
Sbjct: 147 FLNVAAVAKIVEIVKRWKWGPELETQLDKLQFVPSMTHVVQALKIINDADGMLSLFKWAK 206

Query: 604 RQSWYVPNDDIYVLLFDRLNLIRDYDGIQSLFE 702
           RQ+WYV +D+ Y LLFD LN IRD+DGIQSLF+
Sbjct: 207 RQTWYVVDDECYALLFDGLNKIRDFDGIQSLFD 239


>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
           gi|449490234|ref|XP_004158545.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
          Length = 823

 Score =  218 bits (556), Expect = 7e-55
 Identities = 106/165 (64%), Positives = 128/165 (77%), Gaps = 1/165 (0%)
 Frame = +1

Query: 211 FLNNFFTPSIGNN-VLTRNFSSGDNGDKVSAEFTEEIVYLDESGGVIFKGKGVRSVEPGV 387
           FL N   P + NN   TR++ SG        E+TE+I YLDESG VIF GKGVRSVEPGV
Sbjct: 55  FLEN---PHVFNNRSFTRSYCSGKESGNGGREWTEDIEYLDESGSVIFSGKGVRSVEPGV 111

Query: 388 DDHIMVGGVKKPFSNAAAVSKVVEIVKRWKWGPEMETQLDKLHFVPNMSHVNQAFKEIGE 567
           DDH+MVGG+KKPF NA+AV+K+VE+V+RWKWGPE+E+QL+KL FVPNM+H+ Q  K I +
Sbjct: 112 DDHVMVGGLKKPFLNASAVAKIVEVVRRWKWGPELESQLEKLQFVPNMTHITQVLKIIDD 171

Query: 568 TDASLSLFRWAKRQSWYVPNDDIYVLLFDRLNLIRDYDGIQSLFE 702
            +ASLSLFRWAKRQSWY PND+ Y LLFD LN  RD+D IQ LF+
Sbjct: 172 AEASLSLFRWAKRQSWYSPNDECYGLLFDGLNQRRDFDAIQLLFD 216


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
           gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 832

 Score =  214 bits (544), Expect = 2e-53
 Identities = 98/161 (60%), Positives = 127/161 (78%)
 Frame = +1

Query: 220 NFFTPSIGNNVLTRNFSSGDNGDKVSAEFTEEIVYLDESGGVIFKGKGVRSVEPGVDDHI 399
           NF   +  +  + R F S  +G   S+ +TEE+ YLDESG V+  GKG+RSVEPG+DDH+
Sbjct: 65  NFVGLTTQSRSIVRRFCSEKSGGSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLDDHV 124

Query: 400 MVGGVKKPFSNAAAVSKVVEIVKRWKWGPEMETQLDKLHFVPNMSHVNQAFKEIGETDAS 579
           MVGG+KKP+ NA+AV+K+VE+V+RWKWGPE+ETQLDKL FVPNM H+ Q+ K + E DA+
Sbjct: 125 MVGGLKKPYMNASAVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAA 184

Query: 580 LSLFRWAKRQSWYVPNDDIYVLLFDRLNLIRDYDGIQSLFE 702
           LSLFRWAK+Q WY+P+D+ YV+LFD LN  RD+ GIQSLFE
Sbjct: 185 LSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFE 225