BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019319
         (1484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]   408   e-111
ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase y...   404   e-110
ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase Y...   370   e-100
ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase Y...   368   3e-99
ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase y...   365   1e-98

>emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]
          Length = 408

 Score =  408 bits (1049), Expect = e-111
 Identities = 207/297 (69%), Positives = 231/297 (77%)
 Frame = +3

Query: 207  ERYGFDSKELLSQSSSXXXXXXXXXXXXXXSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 386
            ERYG+D+ E +S+ S                  V  E+PKPPRTTHKLLQVL G ARRKK
Sbjct: 64   ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123

Query: 387  LLSPKGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSE 566
            LLSPKGMDVRPMMEVVKGAAFDILQVAGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE
Sbjct: 124  LLSPKGMDVRPMMEVVKGAAFDILQVAGGCPASLRPGRWLDLYSGTGSVGIEALSRGCSE 183

Query: 567  AHFVEMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPP 746
             HFVEMDPWV+S+VLRPNLEWT FLD SVIHT+RVE FLERA +FVG++ SFDYISVTPP
Sbjct: 184  VHFVEMDPWVVSDVLRPNLEWTGFLDVSVIHTVRVENFLERAMQFVGKDQSFDYISVTPP 243

Query: 747  YTAVDYSVLMGQISSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFGRTHLAIYGP 926
            YT VDY VLMGQISSSALVGED+FIVVEYP R DMLD+CGCLVKI+DRRFGRTHLAIYGP
Sbjct: 244  YTEVDYEVLMGQISSSALVGEDTFIVVEYPLRIDMLDSCGCLVKIADRRFGRTHLAIYGP 303

Query: 927  KWAQKRRKSDNSAGTILRKFQVESKRNSFTET*RIDRLMCF*SRVQDLLPEPRECIN 1097
            KWAQKRRKS+ S   +  K              R+   +C+ SR+  LL +  + +N
Sbjct: 304  KWAQKRRKSEKSFPVVAEKMIANG---------RLKVWLCWHSRISTLLDKYEKILN 351


>ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase ylbH [Vitis vinifera]
           gi|296087748|emb|CBI35004.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  404 bits (1039), Expect = e-110
 Identities = 200/259 (77%), Positives = 217/259 (83%)
 Frame = +3

Query: 207 ERYGFDSKELLSQSSSXXXXXXXXXXXXXXSSVVPLEEPKPPRTTHKLLQVLAGTARRKK 386
           ERYG+D+ E +S+ S                  V  E+PKPPRTTHKLLQVL G ARRKK
Sbjct: 64  ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123

Query: 387 LLSPKGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRGCSE 566
           LLSPKGMDVRPMMEVVKGAAFDILQVAGG PASLRPGRWLDLYSGTGSVGIEA+SRGCSE
Sbjct: 124 LLSPKGMDVRPMMEVVKGAAFDILQVAGGCPASLRPGRWLDLYSGTGSVGIEALSRGCSE 183

Query: 567 AHFVEMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISVTPP 746
            HFVEMDPWV+S+VLRPNLEWT FLD SVIHT+RVE FLERA +FVG++ SFDYISVTPP
Sbjct: 184 VHFVEMDPWVVSDVLRPNLEWTGFLDVSVIHTVRVENFLERAMQFVGKDQSFDYISVTPP 243

Query: 747 YTAVDYSVLMGQISSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFGRTHLAIYGP 926
           YT VDY VLMGQISSSALVGED+FIVVEYP R DMLD+CGCLVKI+DRRFGRTHLAIYGP
Sbjct: 244 YTEVDYEVLMGQISSSALVGEDTFIVVEYPLRIDMLDSCGCLVKIADRRFGRTHLAIYGP 303

Query: 927 KWAQKRRKSDNSAGTILRK 983
           KWAQKRRKS+ S   +  K
Sbjct: 304 KWAQKRRKSEKSFPVVAEK 322


>ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 313

 Score =  370 bits (949), Expect = e-100
 Identities = 196/320 (61%), Positives = 228/320 (71%), Gaps = 8/320 (2%)
 Frame = +3

Query: 24  SLPIINTCTSS-------NYSYLNPLFVISSCKKPIGR-GQLIIICXXXXXXXXXXXXXX 179
           SLP++++ ++S       ++S  +PL  I  C KP       II+C              
Sbjct: 5   SLPVLSSLSASANISDVTSFSLNSPLSNI--CSKPSAHPSSSIIVCSYKSGNHTVTERKK 62

Query: 180 XXXXXXXXXERYGFDSKELLSQSSSXXXXXXXXXXXXXXSSVVPLEEPKPPRTTHKLLQV 359
                    E+YG D  E LS+ S+                + P E+PKP R THKLLQV
Sbjct: 63  KLL------EQYGLDPNEFLSEPSTNRRREMRKTGKG--KQIFP-EDPKPQRQTHKLLQV 113

Query: 360 LAGTARRKKLLSPKGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGI 539
           L G+ARR KLLSPKG+DVRPMMEVVKGAAFDILQ AGG PASLRPGRWLDLYSGTGSVGI
Sbjct: 114 LGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGI 173

Query: 540 EAISRGCSEAHFVEMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGS 719
           EA+SRGCSE HFVEMDPWV+S+VLRPNLE T F D SVIHT+RVE F+ERAD+ +G    
Sbjct: 174 EAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERP 233

Query: 720 FDYISVTPPYTAVDYSVLMGQISSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFG 899
           FDYISVTPPYT VDY VLMGQ+S SALVGED+FIVVEYP RTDML++CGCL KI+DRRFG
Sbjct: 234 FDYISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFG 293

Query: 900 RTHLAIYGPKWAQKRRKSDN 959
           RTHLAIYGPKWA+K++K  N
Sbjct: 294 RTHLAIYGPKWAEKKKKEKN 313


>ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 315

 Score =  368 bits (944), Expect = 3e-99
 Identities = 195/317 (61%), Positives = 227/317 (71%), Gaps = 8/317 (2%)
 Frame = +3

Query: 24  SLPIINTCTSS-------NYSYLNPLFVISSCKKPIGR-GQLIIICXXXXXXXXXXXXXX 179
           SLP++++ ++S       ++S  +PL  I  C KP       II+C              
Sbjct: 5   SLPVLSSLSASANISDVTSFSLNSPLSNI--CSKPSAHPSSSIIVCSYKSGNHTVTERKK 62

Query: 180 XXXXXXXXXERYGFDSKELLSQSSSXXXXXXXXXXXXXXSSVVPLEEPKPPRTTHKLLQV 359
                    E+YG D  E LS+ S+                + P E+PKP R THKLLQV
Sbjct: 63  KLL------EQYGLDPNEFLSEPSTNRRREMRKTGKG--KQIFP-EDPKPQRQTHKLLQV 113

Query: 360 LAGTARRKKLLSPKGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGI 539
           L G+ARR KLLSPKG+DVRPMMEVVKGAAFDILQ AGG PASLRPGRWLDLYSGTGSVGI
Sbjct: 114 LGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGI 173

Query: 540 EAISRGCSEAHFVEMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGS 719
           EA+SRGCSE HFVEMDPWV+S+VLRPNLE T F D SVIHT+RVE F+ERAD+ +G    
Sbjct: 174 EAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERP 233

Query: 720 FDYISVTPPYTAVDYSVLMGQISSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFG 899
           FDYISVTPPYT VDY VLMGQ+S SALVGED+FIVVEYP RTDML++CGCL KI+DRRFG
Sbjct: 234 FDYISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFG 293

Query: 900 RTHLAIYGPKWAQKRRK 950
           RTHLAIYGPKWA+K++K
Sbjct: 294 RTHLAIYGPKWAEKKKK 310


>ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase ylbH-like [Glycine max]
          Length = 311

 Score =  365 bits (938), Expect = 1e-98
 Identities = 184/251 (73%), Positives = 207/251 (82%), Gaps = 3/251 (1%)
 Frame = +3

Query: 207 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXXSSVV-PLEEPKPPRTTHKLLQVLAGTAR 377
           E+YG+D  + E  SQSSS                V  P E+PKPPR THKLLQVL GTAR
Sbjct: 61  EKYGYDIDADEYFSQSSSKSKRRKEQPRRRGGKQVQDPPEDPKPPRVTHKLLQVLGGTAR 120

Query: 378 RKKLLSPKGMDVRPMMEVVKGAAFDILQVAGGNPASLRPGRWLDLYSGTGSVGIEAISRG 557
           R KLLSPKGMDVRPMMEVVKGAAFDILQ AGG PA+LRPGRWLDLYSGTGSVGIEA+SRG
Sbjct: 121 RVKLLSPKGMDVRPMMEVVKGAAFDILQAAGGCPAALRPGRWLDLYSGTGSVGIEALSRG 180

Query: 558 CSEAHFVEMDPWVISEVLRPNLEWTEFLDASVIHTLRVETFLERADKFVGQNGSFDYISV 737
           CS+ HFVEMDPWV+S+VLRPNLE T FLDASVIHT+RVE F ERA++FVG +G FDYISV
Sbjct: 181 CSQVHFVEMDPWVVSDVLRPNLEETGFLDASVIHTVRVEKFFERAEQFVGNSGPFDYISV 240

Query: 738 TPPYTAVDYSVLMGQISSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFGRTHLAI 917
           TPPYT VDY VLM QIS S+L+GE++FIVVEYP +TDMLD+CG LVKI+DRRFGRT LAI
Sbjct: 241 TPPYTQVDYGVLMRQISESSLIGENTFIVVEYPLKTDMLDSCGSLVKITDRRFGRTLLAI 300

Query: 918 YGPKWAQKRRK 950
           YGP W+QK+R+
Sbjct: 301 YGPTWSQKKRR 311