BLASTX nr result

ID: Coptis21_contig00019295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019295
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39204.1| unknown [Lotus japonicus]                              145   6e-33
ref|XP_002519649.1| conserved hypothetical protein [Ricinus comm...   145   6e-33
ref|XP_002322446.1| predicted protein [Populus trichocarpa] gi|2...   142   5e-32
ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792...   141   1e-31
ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262...   141   2e-31

>gb|AFK39204.1| unknown [Lotus japonicus]
          Length = 111

 Score =  145 bits (367), Expect = 6e-33
 Identities = 68/84 (80%), Positives = 76/84 (90%)
 Frame = +3

Query: 156 GSDEDSCNVSRVRKLLFRRMLVGVNDGRFFLGAFHCIDKQGNIILQDAVEYRTTRRSSHS 335
           G+ + S  VSRVRKLLFRRMLVG+ DGRFFLG F+CIDKQGNIILQDAVEYR+TRRSS S
Sbjct: 14  GTSDSSSRVSRVRKLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRSSPS 73

Query: 336 PMDTRCLGLILIPSSCRSSCHVDC 407
           PM+ RCLGLILIPSSCR++CHVDC
Sbjct: 74  PMEQRCLGLILIPSSCRATCHVDC 97


>ref|XP_002519649.1| conserved hypothetical protein [Ricinus communis]
           gi|223541066|gb|EEF42622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score =  145 bits (367), Expect = 6e-33
 Identities = 67/91 (73%), Positives = 78/91 (85%)
 Frame = +3

Query: 135 EPGRGSEGSDEDSCNVSRVRKLLFRRMLVGVNDGRFFLGAFHCIDKQGNIILQDAVEYRT 314
           +PG   + +   S  VSRVRKLLFR+MLVG+ DGRFFLG FHCIDKQGNIILQDAVEYR+
Sbjct: 15  QPGSSDKSNSNSSGPVSRVRKLLFRKMLVGIKDGRFFLGTFHCIDKQGNIILQDAVEYRS 74

Query: 315 TRRSSHSPMDTRCLGLILIPSSCRSSCHVDC 407
           TRR+S SPM+ RCLGLILIP+SCR++CHVDC
Sbjct: 75  TRRTSPSPMEQRCLGLILIPASCRTTCHVDC 105


>ref|XP_002322446.1| predicted protein [Populus trichocarpa] gi|222869442|gb|EEF06573.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  142 bits (359), Expect = 5e-32
 Identities = 69/93 (74%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = +3

Query: 132 MEPGRGSEGSDEDSCN-VSRVRKLLFRRMLVGVNDGRFFLGAFHCIDKQGNIILQDAVEY 308
           ME    ++ ++  S + VSR RKLLFRRMLVG+ DGRFFLG+FHCIDKQGNIILQDAVEY
Sbjct: 5   MEISSSTQATESSSSDIVSRARKLLFRRMLVGIKDGRFFLGSFHCIDKQGNIILQDAVEY 64

Query: 309 RTTRRSSHSPMDTRCLGLILIPSSCRSSCHVDC 407
           R T RSS SPM+ RCLGLILIPSSCR+SCHVDC
Sbjct: 65  RNTHRSSPSPMEQRCLGLILIPSSCRTSCHVDC 97


>ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792908 [Glycine max]
          Length = 107

 Score =  141 bits (356), Expect = 1e-31
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = +3

Query: 135 EPGRGSEGSDEDSCNVSRVRKLLFRRMLVGVNDGRFFLGAFHCIDKQGNIILQDAVEYRT 314
           E G   EGS   S  VSR RKLLFRRMLVG+ DGRFFLG+F+CIDKQGNIILQDAVEYR+
Sbjct: 3   EEGVPVEGS---SGTVSRARKLLFRRMLVGIKDGRFFLGSFYCIDKQGNIILQDAVEYRS 59

Query: 315 TRRSSHSPMDTRCLGLILIPSSCRSSCHVDC 407
           TR+SS SPM+ RCLGLILIPSSCR+SCHVDC
Sbjct: 60  TRQSSPSPMEQRCLGLILIPSSCRTSCHVDC 90


>ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]
          Length = 116

 Score =  141 bits (355), Expect = 2e-31
 Identities = 68/87 (78%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
 Frame = +3

Query: 150 SEGSDEDSCN-VSRVRKLLFRRMLVGVNDGRFFLGAFHCIDKQGNIILQDAVEYRTTRRS 326
           SEGS+ +  N V++VR LLFRRMLVGV+DGRFFLG+FHC+DKQGNIILQD VEYR+TRRS
Sbjct: 17  SEGSNPNGSNPVTKVRMLLFRRMLVGVSDGRFFLGSFHCMDKQGNIILQDTVEYRSTRRS 76

Query: 327 SHSPMDTRCLGLILIPSSCRSSCHVDC 407
           S SPM+ RCLGLILIP SCR+SCHVDC
Sbjct: 77  SPSPMEQRCLGLILIPFSCRTSCHVDC 103


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