BLASTX nr result

ID: Coptis21_contig00019271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019271
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517628.1| small heat-shock protein, putative [Ricinus ...   164   2e-38
ref|XP_002267925.1| PREDICTED: 26.5 kDa heat shock protein, mito...   160   2e-37
ref|XP_002299753.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
ref|XP_002894385.1| hypothetical protein ARALYDRAFT_337408 [Arab...   151   1e-34
ref|XP_003531712.1| PREDICTED: 26.5 kDa heat shock protein, mito...   144   1e-32

>ref|XP_002517628.1| small heat-shock protein, putative [Ricinus communis]
           gi|223543260|gb|EEF44792.1| small heat-shock protein,
           putative [Ricinus communis]
          Length = 236

 Score =  164 bits (414), Expect = 2e-38
 Identities = 98/179 (54%), Positives = 121/179 (67%), Gaps = 7/179 (3%)
 Frame = -3

Query: 638 ETAVTDKGGRKISKWFPISLGKGGRHGGLWRNNTSSD-SNLQHLAPSGLGHALQLATENF 462
           E AV+++  +K SK F    GK G    LWR N       L    PSGLG+AL  ATEN 
Sbjct: 62  EVAVSERDNKK-SKLFSKKKGKRG----LWRRNGGEFVPQLYEFFPSGLGNALLQATENI 116

Query: 461 NRLLENLN--PSRLLGRWKEQDDCYKLEYPVPGLTKEDIQITVVDGVLTIRGE-RXXXXX 291
           NRL ENLN  PS L+ R KE+++CYKL Y VPG+TKED++ITV DGVLTI+GE +     
Sbjct: 117 NRLFENLNLSPSNLMRRLKEKEECYKLRYEVPGVTKEDLKITVDDGVLTIKGEHKEEEEE 176

Query: 290 XXXXXDQWAV--YGYYNT-VLLPDDANEDGIQAEMKDGVLKIIIPRTERPKKDVKEIKI 123
                + W++  YGYYNT VLLPDDA  D I+AE+K+GVL I IPRTE+PKKDVKE++I
Sbjct: 177 EGSDDEHWSMRSYGYYNTSVLLPDDAKADEIKAELKNGVLHITIPRTEQPKKDVKEVQI 235


>ref|XP_002267925.1| PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Vitis
           vinifera] gi|297743451|emb|CBI36318.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  160 bits (405), Expect = 2e-37
 Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 4/177 (2%)
 Frame = -3

Query: 638 ETAVTDKGGRKISKWFPISLGKGGRHGGLWRNNTSSD-SNLQHLAPSGLGHALQLATENF 462
           E AV++ G RK  K FP    +  R   LWRNN +    +L  L P  +G+AL  AT++ 
Sbjct: 63  EVAVSE-GDRK-PKLFP----RKQRKRSLWRNNRNDFVPSLNELFPPSIGNALMQATQHM 116

Query: 461 NRLLENLNPSRLLGRWKEQDDCYKLEYPVPGLTKEDIQITVVDGVLTIRGERXXXXXXXX 282
           NRLLENL PSRL+GR KEQD CYKL Y +PGLTKED++I+V DG+L+IRGE         
Sbjct: 117 NRLLENLAPSRLIGRLKEQDQCYKLRYEMPGLTKEDVKISVEDGILSIRGEHKEEEEEGS 176

Query: 281 XXDQWAV--YGYYNT-VLLPDDANEDGIQAEMKDGVLKIIIPRTERPKKDVKEIKIQ 120
             + W+   YGYY+T +LLP DA  + I+AE+KDGVL IIIPR E+  KDVKE++IQ
Sbjct: 177 DDEHWSATSYGYYDTSLLLPTDAKIEEIKAELKDGVLTIIIPRNEKKGKDVKEVQIQ 233


>ref|XP_002299753.1| predicted protein [Populus trichocarpa] gi|222847011|gb|EEE84558.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  154 bits (388), Expect = 2e-35
 Identities = 91/175 (52%), Positives = 114/175 (65%), Gaps = 8/175 (4%)
 Frame = -3

Query: 623 DKGGRKISKWFPISLGKGGRHGGLWRNNTSSD--SNLQHLAPSGLGHALQLATENFNRLL 450
           DK   K SK F    GK G    LWR +   D    L    PSGLG+AL  AT+N N+L 
Sbjct: 73  DKDSDK-SKLFRRKKGKKG----LWRKSDGIDFVPALYEFFPSGLGNALVQATDNINKLF 127

Query: 449 ENLN---PSRLLGRWKEQDDCYKLEYPVPGLTKEDIQITVVDGVLTIRGERXXXXXXXXX 279
           +NL+   PS L+GR KE+D+CYKL Y VPG++KED++I + DGVLTI+GE          
Sbjct: 128 QNLHIPAPSNLIGRVKEKDECYKLRYEVPGVSKEDLKIAIDDGVLTIKGELKEEEEEGSD 187

Query: 278 XDQWAV--YGYYNT-VLLPDDANEDGIQAEMKDGVLKIIIPRTERPKKDVKEIKI 123
            + W++  YG YNT ++LPDDA  D I+AE+KDGVL I IPRTE+PKKDVKEI I
Sbjct: 188 GEHWSMRSYGCYNTSIMLPDDAKTDEIKAELKDGVLYITIPRTEKPKKDVKEIDI 242


>ref|XP_002894385.1| hypothetical protein ARALYDRAFT_337408 [Arabidopsis lyrata subsp.
           lyrata] gi|297340227|gb|EFH70644.1| hypothetical protein
           ARALYDRAFT_337408 [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score =  151 bits (381), Expect = 1e-34
 Identities = 82/155 (52%), Positives = 104/155 (67%), Gaps = 10/155 (6%)
 Frame = -3

Query: 554 LWRNNTSSD---SNLQHLAPSGLGHALQLATENFNRLLENLN--PSRLLGRWKEQDDCYK 390
           LWRN          L    P  LG+AL  ATEN NR+ +N N  PS+L+G+ KEQDDCYK
Sbjct: 78  LWRNTDDHGYFVPTLNEFFPPTLGNALMQATENINRIFDNFNIRPSQLMGQVKEQDDCYK 137

Query: 389 LEYPVPGLTKEDIQITVVDGVLTIRGERXXXXXXXXXXDQ--WA--VYGYYNTVL-LPDD 225
           L Y VPGLTK+D++ITV DG+LTI+GE           +   W+   YGYYNT L LPDD
Sbjct: 138 LRYEVPGLTKDDVKITVDDGILTIKGEHKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDD 197

Query: 224 ANEDGIQAEMKDGVLKIIIPRTERPKKDVKEIKIQ 120
           A  D I+AE+K+GVL ++IPRTE+PKKDV+EI ++
Sbjct: 198 AKVDDIKAELKNGVLNLVIPRTEKPKKDVQEISVE 232


>ref|XP_003531712.1| PREDICTED: 26.5 kDa heat shock protein, mitochondrial-like [Glycine
           max]
          Length = 225

 Score =  144 bits (363), Expect = 1e-32
 Identities = 86/180 (47%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
 Frame = -3

Query: 638 ETAVTDKGGRKISKWFPISLGKGGRHGGLWRNNTSSD--SNLQHLAPSGLGHALQLATEN 465
           E AVT+  G+K ++ FP   G+       WRN    D    L  L PSGLG AL  A+ N
Sbjct: 52  EVAVTE--GKKSNRMFPRRRGRRWA----WRNEDHDDFPPALYELFPSGLGSALMQASNN 105

Query: 464 FNRLLENLNP---SRLLGRWKEQDDCYKLEYPVPGLTKEDIQITVVD-GVLTIRGERXXX 297
            NRL EN+N    S   GR KE+DD YKL Y +PG+ KED++IT+ D GVLTI+GE    
Sbjct: 106 INRLFENMNLTPWSLTSGRVKEKDDHYKLRYEMPGIAKEDVKITIDDDGVLTIKGEHKEE 165

Query: 296 XXXXXXXDQWAVYGYYNT-VLLPDDANEDGIQAEMKDGVLKIIIPRTERPKKDVKEIKIQ 120
                     + YGYYNT ++LPDDA  D I+AE+KDGVL +IIP+T+ P+KDVK++ I+
Sbjct: 166 KDDDEQYWSSSSYGYYNTSLILPDDAKADDIKAELKDGVLTLIIPKTQNPQKDVKQVTIE 225


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