BLASTX nr result

ID: Coptis21_contig00019270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019270
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525300.1| PREDICTED: vacuolar protein sorting-associat...   132   6e-29
ref|XP_004141038.1| PREDICTED: vacuolar protein sorting-associat...   132   7e-29
gb|AFK48250.1| unknown [Lotus japonicus]                              132   7e-29
gb|AFK45318.1| unknown [Lotus japonicus]                              132   7e-29
ref|NP_179573.1| vacuolar protein sorting-associated protein 32-...   132   7e-29

>ref|XP_003525300.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           1-like isoform 1 [Glycine max]
           gi|356513199|ref|XP_003525301.1| PREDICTED: vacuolar
           protein sorting-associated protein 32 homolog 1-like
           isoform 2 [Glycine max]
          Length = 218

 Score =  132 bits (333), Expect = 6e-29
 Identities = 66/92 (71%), Positives = 74/92 (80%)
 Frame = +2

Query: 260 AAVQCLKKSKLYEQQVSQLGNFQLRIHDQMIMLESANATTETVSALRTGAKAIGKLQKNM 439
           AA+QCLK+ +LYEQQ+ QLGNFQLRIHDQMIMLE A ATTETV ALRTGA A+  +QK  
Sbjct: 58  AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAAAMRAMQKET 117

Query: 440 SIKDVDKTMDEINELQENMKMINESLQHPTGA 535
           +I DVDKTMDEINE  ENMK I E+L  P GA
Sbjct: 118 NIDDVDKTMDEINEQTENMKQIQEALSTPIGA 149


>ref|XP_004141038.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           2-like [Cucumis sativus]
           gi|449487999|ref|XP_004157906.1| PREDICTED: vacuolar
           protein sorting-associated protein 32 homolog 2-like
           [Cucumis sativus]
          Length = 218

 Score =  132 bits (332), Expect = 7e-29
 Identities = 66/92 (71%), Positives = 74/92 (80%)
 Frame = +2

Query: 260 AAVQCLKKSKLYEQQVSQLGNFQLRIHDQMIMLESANATTETVSALRTGAKAIGKLQKNM 439
           AA+QCLK+ +LYEQQ+ QLGNFQLRIHDQMIMLE A ATTETV ALRTGA A+  +QK  
Sbjct: 58  AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKAT 117

Query: 440 SIKDVDKTMDEINELQENMKMINESLQHPTGA 535
           +I DVDKTMDEINE  ENMK I E+L  P GA
Sbjct: 118 NIDDVDKTMDEINEQTENMKQIQEALSAPIGA 149


>gb|AFK48250.1| unknown [Lotus japonicus]
          Length = 218

 Score =  132 bits (332), Expect = 7e-29
 Identities = 66/92 (71%), Positives = 74/92 (80%)
 Frame = +2

Query: 260 AAVQCLKKSKLYEQQVSQLGNFQLRIHDQMIMLESANATTETVSALRTGAKAIGKLQKNM 439
           AA+QCLK+ +LYEQQ+ QLGNFQLRIHDQMIMLE A ATTETV ALRTGA A+  +QK  
Sbjct: 58  AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKAT 117

Query: 440 SIKDVDKTMDEINELQENMKMINESLQHPTGA 535
           +I DVDKTMDEINE  ENMK I E+L  P GA
Sbjct: 118 NIDDVDKTMDEINEQTENMKQIQEALSAPIGA 149


>gb|AFK45318.1| unknown [Lotus japonicus]
          Length = 218

 Score =  132 bits (332), Expect = 7e-29
 Identities = 66/92 (71%), Positives = 74/92 (80%)
 Frame = +2

Query: 260 AAVQCLKKSKLYEQQVSQLGNFQLRIHDQMIMLESANATTETVSALRTGAKAIGKLQKNM 439
           AA+QCLK+ +LYEQQ+ QLGNFQLRIHDQMIMLE A ATTETV ALRTGA A+  +QK  
Sbjct: 58  AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKAT 117

Query: 440 SIKDVDKTMDEINELQENMKMINESLQHPTGA 535
           +I DVDKTMDEINE  ENMK I E+L  P GA
Sbjct: 118 NIDDVDKTMDEINEQTENMKQIQEALSAPIGA 149


>ref|NP_179573.1| vacuolar protein sorting-associated protein 32-1 [Arabidopsis
           thaliana] gi|75100551|sp|O82197.1|VP321_ARATH RecName:
           Full=Vacuolar protein sorting-associated protein 32
           homolog 1; Short=AtVPS32-1; AltName: Full=Charged
           multivesicular body protein 4 homolog 1; AltName:
           Full=ESCRT-III complex subunit VPS32 homolog 1
           gi|3687235|gb|AAC62133.1| copia-like retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|15028177|gb|AAK76585.1| putative copia retroelement
           pol polyprotein [Arabidopsis thaliana]
           gi|19310843|gb|AAL85152.1| putative copia retroelement
           pol polyprotein [Arabidopsis thaliana]
           gi|330251837|gb|AEC06931.1| vacuolar protein
           sorting-associated protein 32-1 [Arabidopsis thaliana]
          Length = 213

 Score =  132 bits (332), Expect = 7e-29
 Identities = 67/92 (72%), Positives = 74/92 (80%)
 Frame = +2

Query: 260 AAVQCLKKSKLYEQQVSQLGNFQLRIHDQMIMLESANATTETVSALRTGAKAIGKLQKNM 439
           AA+QCLK+ +LYEQQV QLGNFQLRIHDQMIMLE A ATTETV ALRTGA A+  +QK  
Sbjct: 59  AAIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKAT 118

Query: 440 SIKDVDKTMDEINELQENMKMINESLQHPTGA 535
           +I DVDKTMDEINE  ENMK I E+L  P GA
Sbjct: 119 NIDDVDKTMDEINEQTENMKQIQEALSAPFGA 150


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