BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019241
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   327   2e-87
ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800...   303   3e-80
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   292   6e-77
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  291   1e-76
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   290   3e-76

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  327 bits (838), Expect = 2e-87
 Identities = 159/296 (53%), Positives = 209/296 (70%), Gaps = 10/296 (3%)
 Frame = +1

Query: 1    AESAFRLIKQKLMSAPVLALPDFSQLFEVACDACKAGIGAALSQNGRPVAFYSQKLYGPS 180
            A  AF  IK K+++ P+L LPDF ++FEVACDA   GIGA LSQ G PVAF+S+KL G  
Sbjct: 892  ANKAFEEIKSKMVNPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAK 951

Query: 181  SRYSTYDVELYAVVQALRHWRHYLLHREFVLKSDHEALRFLNSQAKVTDRQAKWFAFLQG 360
             +YSTYD+E YAVVQA+RHW+HYL ++EFVL SDHEALR+LNSQ K+  R AKW +FLQ 
Sbjct: 952  KKYSTYDLEFYAVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQL 1011

Query: 361  YTFLLKHQPGTANKVADALSRREHVLVSLRTTVFGFDELKGLYALDPFFDPIFQS----- 525
            +TF LKH  G  NKVADALSR+  +LV++ TT  GF+ELK  Y  D  F  ++ S     
Sbjct: 1012 FTFNLKHCAGIENKVADALSRKALLLVNMSTTTIGFEELKHCYDNDADFGDVYSSLLSGS 1071

Query: 526  ---CIDNE--HGFLFRGSQLCIPQSSFREKLIAEFHSGGLAGHAGVLHTLPGLRERYFWP 690
               CID +   G+LF  ++LC+P++S R+ +I E H GG+ GH G   T+  + +R+FWP
Sbjct: 1072 KATCIDFQILEGYLFYKNRLCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWP 1131

Query: 691  SMRRDTNAFIRRRYTCQLAKGQKTNDGLYTPLPIPERPWLDVSMDFVLGLPKTNKG 858
            S+++D    I++   CQ+ KG K N GLYTPLP+P +PW D+SMDFVLGLP+T +G
Sbjct: 1132 SLKKDVWKVIKQCRACQVGKGSKQNTGLYTPLPVPSKPWEDLSMDFVLGLPRTQRG 1187


>ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max]
          Length = 1746

 Score =  303 bits (777), Expect = 3e-80
 Identities = 146/292 (50%), Positives = 194/292 (66%), Gaps = 7/292 (2%)
 Frame = +1

Query: 4    ESAFRLIKQKLMSAPVLALPDFSQLFEVACDACKAGIGAALSQNGRPVAFYSQKLYGPSS 183
            E AF  +K  L +AP+LA+P+F++ FE+ CDA   GIGA L Q G P+A++S+KL   + 
Sbjct: 918  EEAFAALKHMLTNAPILAMPNFAKSFEIECDASNVGIGAVLLQEGHPIAYFSEKLGAAAL 977

Query: 184  RYSTYDVELYAVVQALRHWRHYLLHREFVLKSDHEALRFLNSQAKVTDRQAKWFAFLQGY 363
             YSTYD ELYA+V+AL+ W+HYLL +EFV+ SDHE+L++L  Q K+  R AKW  FL+ +
Sbjct: 978  NYSTYDKELYALVRALQTWQHYLLPKEFVIHSDHESLKYLKGQGKLNKRHAKWVEFLEQF 1037

Query: 364  TFLLKHQPGTANKVADALSRREHVLVSLRTTVFGFDELKGLYALDPFFDPIFQSC----- 528
             +++KH+ G  N VADALSRR  +L  L T +FG + LK +Y  D  F  IF +C     
Sbjct: 1038 PYVIKHKKGKGNVVADALSRRHALLAMLETKLFGLESLKDMYVHDVDFAEIFAACEKFSE 1097

Query: 529  --IDNEHGFLFRGSQLCIPQSSFREKLIAEFHSGGLAGHAGVLHTLPGLRERYFWPSMRR 702
                  +GFLF+ ++LC+P+ S RE L++E H GGL GH GV  TL  L E +FWP MRR
Sbjct: 1098 NGYYRHNGFLFKANKLCVPKCSIRELLVSESHEGGLMGHFGVQKTLEILLEHFFWPHMRR 1157

Query: 703  DTNAFIRRRYTCQLAKGQKTNDGLYTPLPIPERPWLDVSMDFVLGLPKTNKG 858
            D + F      C+ AK +    GLYTPLP+PE PW D+SMDFVLGLPKT  G
Sbjct: 1158 DVHKFCGHCIVCKQAKSKVKPHGLYTPLPVPEYPWTDISMDFVLGLPKTKNG 1209


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 889

 Score =  292 bits (748), Expect = 6e-77
 Identities = 142/292 (48%), Positives = 191/292 (65%), Gaps = 8/292 (2%)
 Frame = +1

Query: 7    SAFRLIKQKLMSAPVLALPDFSQLFEVACDACKAGIGAALSQNGRPVAFYSQKLYGPSSR 186
            +AF  +K KL  AP+L LPDF++ FE+ CDA   G+G  L Q G+PVA++S+KL GPS  
Sbjct: 331  NAFDTLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLN 390

Query: 187  YSTYDVELYAVVQALRHWRHYLLHREFVLKSDHEALRFLNSQAKVTDRQAKWFAFLQGYT 366
            YSTYD EL+A+V+ L  W+HYL  +EFV+ SDHE+L+ + SQAK+  R AKW  F++ + 
Sbjct: 391  YSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFP 450

Query: 367  FLLKHQPGTANKVADALSRREHVLVSLRTTVFGFDELKGLYALDPFFDPIFQSCIDNE-- 540
            +++KH+ G  N +ADALSRR  +L  L   +FG + +K  YA D  F  +  +C++    
Sbjct: 451  YVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNCMEGRTW 510

Query: 541  ------HGFLFRGSQLCIPQSSFREKLIAEFHSGGLAGHAGVLHTLPGLRERYFWPSMRR 702
                  +GF+FR ++LCIP SS R  L+ E H GGL GH GV  T   L + +FWP MRR
Sbjct: 511  NKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRR 570

Query: 703  DTNAFIRRRYTCQLAKGQKTNDGLYTPLPIPERPWLDVSMDFVLGLPKTNKG 858
            D   F+ R  TCQ AK +    GLY PLP+P  PW D+SMDFVLGLP+T KG
Sbjct: 571  DVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKG 622


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  291 bits (745), Expect = 1e-76
 Identities = 142/293 (48%), Positives = 190/293 (64%), Gaps = 8/293 (2%)
 Frame = +1

Query: 4    ESAFRLIKQKLMSAPVLALPDFSQLFEVACDACKAGIGAALSQNGRPVAFYSQKLYGPSS 183
            E AF ++K KL  AP+L LPDF++ FE+ CDA   G+G  L Q+G+PVA++S+KL GPS 
Sbjct: 1048 EEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSL 1107

Query: 184  RYSTYDVELYAVVQALRHWRHYLLHREFVLKSDHEALRFLNSQAKVTDRQAKWFAFLQGY 363
             YSTYD ELYA+V+ L  W+HYL  +EFV+ SDHE+L+ + SQAK+  R AKW  F++ +
Sbjct: 1108 NYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETF 1167

Query: 364  TFLLKHQPGTANKVADALSRREHVLVSLRTTVFGFDELKGLYALDPFFDPIFQSCIDN-- 537
             +++KH+ G  N +ADALSRR  +L  L   +FG + +K  Y  D  F  + ++C +   
Sbjct: 1168 PYVIKHKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENCREGRT 1227

Query: 538  ------EHGFLFRGSQLCIPQSSFREKLIAEFHSGGLAGHAGVLHTLPGLRERYFWPSMR 699
                   +GF+FR ++LCIP SS R  L+ E H GGL GH GV      L   +FWP MR
Sbjct: 1228 WNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMGHFGVKKMEDVLATHFFWPRMR 1287

Query: 700  RDTNAFIRRRYTCQLAKGQKTNDGLYTPLPIPERPWLDVSMDFVLGLPKTNKG 858
            RD   F+ R  TCQ AK +    GLY PLP+P  PW D+SMDFVLGLP+T KG
Sbjct: 1288 RDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKG 1340


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  290 bits (742), Expect = 3e-76
 Identities = 142/293 (48%), Positives = 189/293 (64%), Gaps = 8/293 (2%)
 Frame = +1

Query: 4    ESAFRLIKQKLMSAPVLALPDFSQLFEVACDACKAGIGAALSQNGRPVAFYSQKLYGPSS 183
            E AF ++K KL  AP+L LP+F++ FE+ CDA   G+G  L Q+G+PVA++S+K  GPS 
Sbjct: 1033 EEAFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSGPSL 1092

Query: 184  RYSTYDVELYAVVQALRHWRHYLLHREFVLKSDHEALRFLNSQAKVTDRQAKWFAFLQGY 363
             YSTYD ELYA+V+ L  W+HYL  +EFV+ SDHE+L+ + SQAK+  R AKW  F++ +
Sbjct: 1093 NYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETF 1152

Query: 364  TFLLKHQPGTANKVADALSRREHVLVSLRTTVFGFDELKGLYALDPFFDPIFQSCIDN-- 537
             +++KH+ G  N +ADALSRR  +L  L   +FG + +K  Y  D  F  + Q+C +   
Sbjct: 1153 PYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDAEFKDVLQNCKEGRT 1212

Query: 538  ------EHGFLFRGSQLCIPQSSFREKLIAEFHSGGLAGHAGVLHTLPGLRERYFWPSMR 699
                    GF+FR ++LCIP SS R  L+ E H GGL GH GV  T   L   +FWP MR
Sbjct: 1213 WNKFVLNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMR 1272

Query: 700  RDTNAFIRRRYTCQLAKGQKTNDGLYTPLPIPERPWLDVSMDFVLGLPKTNKG 858
            RD   F+ R  TCQ AK +    GLY PLP+P  PW D+SMDFVLGLP+T KG
Sbjct: 1273 RDVERFVARCTTCQRAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKG 1325