BLASTX nr result

ID: Coptis21_contig00019233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019233
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283439.2| PREDICTED: probable disease resistance prote...    82   3e-14
emb|CBI20159.3| unnamed protein product [Vitis vinifera]               82   3e-14
emb|CBI20163.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    77   1e-12
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...    77   1e-12

>ref|XP_002283439.2| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1276

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 6/75 (8%)
 Frame = +1

Query: 229  LKKLFVCNLPKLMSIWKGVMVCDSLQTVEVRNCPELKRLPLF------NREHQSAPPSLK 390
            L+ L + NLPKL SIWKG M CDSLQ + V NCPEL+RLPL       + E +++ P LK
Sbjct: 1162 LQSLTLENLPKLKSIWKGTMTCDSLQ-LTVWNCPELRRLPLSVQINDGSGERRASTPPLK 1220

Query: 391  EIYGSREWWDSLEWD 435
            +I G +EWWD LEW+
Sbjct: 1221 QIRGEKEWWDGLEWN 1235


>emb|CBI20159.3| unnamed protein product [Vitis vinifera]
          Length = 757

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 6/75 (8%)
 Frame = +1

Query: 229 LKKLFVCNLPKLMSIWKGVMVCDSLQTVEVRNCPELKRLPLF------NREHQSAPPSLK 390
           L+ L + NLPKL SIWKG M CDSLQ + V NCPEL+RLPL       + E +++ P LK
Sbjct: 638 LQSLTLENLPKLKSIWKGTMTCDSLQ-LTVWNCPELRRLPLSVQINDGSGERRASTPPLK 696

Query: 391 EIYGSREWWDSLEWD 435
           +I G +EWWD LEW+
Sbjct: 697 QIRGEKEWWDGLEWN 711


>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/150 (32%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
 Frame = +1

Query: 13   CLKTLEIGSCHNIK-IXXXXXXXXXXXXXEEIGVKNCXXXXXXXXXXXXXXXGRNNNNHS 189
            CLK L +  CHN+K +             + I V++C                  NN   
Sbjct: 765  CLKHLYVSKCHNLKHLLTLELVKNHLQNLQNIYVRSCSQMEDIIVGVEEEDINEKNN--- 821

Query: 190  GTGIDYTVALPTRLKKLFVCNLPKLMSIWKGVMVCDSLQTVEVRNCPELKRLPLF----- 354
                   +      + L + +LPKL  IWKG M CDSLQ + V  C  LKRLP       
Sbjct: 822  ------PILCFPNFRCLELVDLPKLKGIWKGTMTCDSLQHLLVLKCRNLKRLPFAVSVHI 875

Query: 355  ---NREHQSAPPSLKEIYGSREWWDSLEWD 435
               N + +++ P LK+I G +EWWD +EWD
Sbjct: 876  NDGNGQRRASTPPLKQIGGDKEWWDGVEWD 905


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1075

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1    GAFPCLKTLEIGSCHNIKIXXXXXXXXXXXXXEEIGVKNCXXXXXXXXXXXXXXXGRNNN 180
            G F  LK + IG C ++K              E I V +C                   +
Sbjct: 913  GTFSHLKKVTIGECPSMKNLFSLDLLPNLTNLEVIEVDDCDQMEEIIAIEDEEEGMMVED 972

Query: 181  NHSGTGIDYTVALPTRLKKLFVCNLPKLMSIWKGVMVCDSLQTVEVRNCPELKRLPLFNR 360
            + S +   Y V     LK L + NLP+L SI+ G ++CDSLQ + V NCP LKR+ L +R
Sbjct: 973  SSSSS--HYAVTSLPNLKVLKLSNLPELKSIFHGEVICDSLQEIIVVNCPNLKRISLSHR 1030

Query: 361  EHQSAPPSLKEIYG-SREWWDSLEW 432
             H +    L++I    +EWW+S+EW
Sbjct: 1031 NHANGQTPLRKIQAYPKEWWESVEW 1055


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1016

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
 Frame = +1

Query: 16   LKTLEIGSCHNIK-IXXXXXXXXXXXXXEEIGVKNCXXXXXXXXXXXXXXXGRNNNNHSG 192
            LK L +  CHN+K +             + I V++C                  NN    
Sbjct: 835  LKHLYVSKCHNLKHLLTLELVKNHLQNLQNIYVRSCSQMEDIIVGVEEEDINEKNN---- 890

Query: 193  TGIDYTVALPTRLKKLFVCNLPKLMSIWKGVMVCDSLQTVEVRNCPELKRLPLF------ 354
                  +      + L + +LPKL  IWKG M CDSLQ + V  C  LKRLP        
Sbjct: 891  -----PILCFPNFRCLELVDLPKLKGIWKGTMTCDSLQHLLVLKCRNLKRLPFAVSVHIN 945

Query: 355  --NREHQSAPPSLKEIYGSREWWDSLEWD 435
              N + +++ P LK+I G +EWWD +EWD
Sbjct: 946  DGNGQRRASTPPLKQIGGDKEWWDGVEWD 974


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