BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019224
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis th...    98   8e-19
ref|NP_850310.1| RING/U-box domain-containing protein [Arabidops...    97   1e-18
ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topor...    97   2e-18
ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topor...    97   2e-18
ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 270

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 16/111 (14%)
 Frame = +2

Query: 2   SCPICLEHINDRK-AAVLCICMHVYCINCIRKWTNLEKRNCPLCNSKFNSWFIKSRNSSR 178
           SCPICLE++ +R+ AAV+ +C H YC+ CIRKW++  KRNCPLCN++F+SWFI S  +SR
Sbjct: 38  SCPICLENLTERRSAAVITVCKHGYCLACIRKWSSF-KRNCPLCNTRFDSWFIVSDFASR 96

Query: 179 QFEKETLPILNEKK---------------RNGLEVESSETRRFSHPRSVRR 286
           ++ KE LPIL +++               R+ LE  SS +R     RS  R
Sbjct: 97  KYHKEQLPILRDRETLTYHRNNPSDRRRSRDVLENSSSRSRPLPWRRSFGR 147


>ref|NP_850310.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|17473924|gb|AAL38373.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|20148385|gb|AAM10083.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|330254541|gb|AEC09635.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 296

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/74 (56%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +2

Query: 2   SCPICLEHINDRK-AAVLCICMHVYCINCIRKWTNLEKRNCPLCNSKFNSWFIKSRNSSR 178
           SCPICLE++ +R+ AAV+ +C H YC+ CIRKW++  KRNCPLCN++F+SWFI S  +SR
Sbjct: 38  SCPICLENLTERRSAAVITVCKHGYCLACIRKWSSF-KRNCPLCNTRFDSWFIVSDFASR 96

Query: 179 QFEKETLPILNEKK 220
           ++ KE LPIL +++
Sbjct: 97  KYHKEQLPILRDRE 110


>ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
           sativus]
          Length = 288

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/83 (54%), Positives = 57/83 (68%)
 Frame = +2

Query: 2   SCPICLEHINDRKAAVLCICMHVYCINCIRKWTNLEKRNCPLCNSKFNSWFIKSRNSSRQ 181
           +CPICL  + DR AAVL  C+H YCI+CIRKW+NL KR CPLCN++F+SWF K   SS+ 
Sbjct: 32  TCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNL-KRTCPLCNAQFDSWFTKINLSSQS 90

Query: 182 FEKETLPILNEKKRNGLEVESSE 250
           F KE L   N   +  + V SS+
Sbjct: 91  FRKERLTTSNCSDKLKVGVGSSQ 113


>ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
           sativus]
          Length = 288

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/83 (54%), Positives = 57/83 (68%)
 Frame = +2

Query: 2   SCPICLEHINDRKAAVLCICMHVYCINCIRKWTNLEKRNCPLCNSKFNSWFIKSRNSSRQ 181
           +CPICL  + DR AAVL  C+H YCI+CIRKW+NL KR CPLCN++F+SWF K   SS+ 
Sbjct: 32  TCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNL-KRTCPLCNAQFDSWFTKINLSSQS 90

Query: 182 FEKETLPILNEKKRNGLEVESSE 250
           F KE L   N   +  + V SS+
Sbjct: 91  FRKERLTTSNCSDKLKVGVGSSQ 113


>ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|222871537|gb|EEF08668.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 12/107 (11%)
 Frame = +2

Query: 2   SCPICLEHIND----RKAAVLCICMHVYCINCIRKWTNLEKRNCPLCNSKFNSWFIKSRN 169
           SCP+CL+        R+ AV+ +C+H YC++CIRKW+++ KR CPLCNS+FNSWF +   
Sbjct: 33  SCPVCLKDFGGEEDYRRVAVIRVCLHAYCLDCIRKWSDI-KRKCPLCNSEFNSWFCRIIL 91

Query: 170 SSRQFEKETLPILNEKKR-NGLEVESSETR-------RFSHPRSVRR 286
           S+R F  E LP++ E +R   L++ SS  R       R S P   RR
Sbjct: 92  STRNFSTEKLPVVRESRRVTPLDILSSRQRAGLNVANRRSRPLPCRR 138