BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019220
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma...   162   3e-38
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   159   3e-37
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...   155   3e-36
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   155   3e-36
emb|CBI35690.3| unnamed protein product [Vitis vinifera]              155   3e-36

>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Cucumis sativus]
           gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY
           PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 1-like [Cucumis sativus]
          Length = 803

 Score =  162 bits (409), Expect = 3e-38
 Identities = 85/141 (60%), Positives = 102/141 (72%), Gaps = 4/141 (2%)
 Frame = -1

Query: 412 VVYHGKNLLGEVDIHPIISLNHQKMNFKEIRISHFSKPSERCTPLSVLHTISNEGVSFKM 233
           VVYHG  LLG+V+I+P     ++ +  KEIRI+HFS+PSERC PL+VLHTI+  G+ FKM
Sbjct: 5   VVYHGDELLGDVEIYPEEKNGYKNIEVKEIRITHFSQPSERCPPLAVLHTIAASGICFKM 64

Query: 232 ESKG----DLMLGSLHSTLLTENKTAIMLLGEEELHLVAMSSRNNSEQHFYFWCFIVGNG 65
           ESK     D  L  LHS+ + ENKTAIM+ G EELHLVAM SR+  +Q+  FW F V  G
Sbjct: 65  ESKTSQSQDTPLNLLHSSCIMENKTAIMMFGVEELHLVAMFSRDLDKQYPCFWGFNVAMG 124

Query: 64  RYASCLVMLNLRCLGIVFDLD 2
            Y SCL MLNLRCLGIVFDLD
Sbjct: 125 LYNSCLDMLNLRCLGIVFDLD 145


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 954

 Score =  159 bits (401), Expect = 3e-37
 Identities = 85/139 (61%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
 Frame = -1

Query: 412 VVYHGKNLLGEVDIHPIISLNHQKMNFKEIRISHFSKPSERCTPLSVLHTISNEGVSFKM 233
           VVY G+ ++GEVD++P  + N++  + KEIRISHFS+PSERC PL+VLHT+++ GV FKM
Sbjct: 5   VVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPLAVLHTVTSCGVCFKM 64

Query: 232 ESKGDLMLG--SLHSTLLTENKTAIMLLGEEELHLVAMSSRNNSEQHFYFWCFIVGNGRY 59
           ESK     G   LHS  + ENKTA+M LG EE+HLVAM SRN       FW FIV  G Y
Sbjct: 65  ESKTQQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNVDRP--CFWGFIVALGLY 122

Query: 58  ASCLVMLNLRCLGIVFDLD 2
            SCLVMLNLRCLGIVFDLD
Sbjct: 123 DSCLVMLNLRCLGIVFDLD 141


>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score =  155 bits (392), Expect = 3e-36
 Identities = 85/141 (60%), Positives = 101/141 (71%), Gaps = 4/141 (2%)
 Frame = -1

Query: 412 VVYHGKNLLGEVDIHPIISLNHQKMNFKEIRISHFSKPSERCTPLSVLHTISNEGVSFKM 233
           +VY G +++GEV+I+P    N      KEIRISH+S+PSERC PL+VLHTI++ GV FKM
Sbjct: 5   IVYEGDDVVGEVEIYP---QNQGLELMKEIRISHYSQPSERCPPLAVLHTITSCGVCFKM 61

Query: 232 ESKG----DLMLGSLHSTLLTENKTAIMLLGEEELHLVAMSSRNNSEQHFYFWCFIVGNG 65
           ES      D  L  LHST + ENKTA+M LGEEELHLVAM S+    Q+  FW F V  G
Sbjct: 62  ESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVALG 121

Query: 64  RYASCLVMLNLRCLGIVFDLD 2
            Y+SCLVMLNLRCLGIVFDLD
Sbjct: 122 LYSSCLVMLNLRCLGIVFDLD 142


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score =  155 bits (392), Expect = 3e-36
 Identities = 86/145 (59%), Positives = 103/145 (71%), Gaps = 8/145 (5%)
 Frame = -1

Query: 412 VVYHGKNLLGEVDIHPIISLNHQKMNF------KEIRISHFSKPSERCTPLSVLHTISNE 251
           VVY G+ ++GEVD++P  + N+   N+      KEIRISHFS+PSERC PL+VLHT+++ 
Sbjct: 5   VVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPLAVLHTVTSC 64

Query: 250 GVSFKMESKGDLMLG--SLHSTLLTENKTAIMLLGEEELHLVAMSSRNNSEQHFYFWCFI 77
           GV FKMESK     G   LHS  + ENKTA+M LG EE+HLVAM SRN+      FW FI
Sbjct: 65  GVCFKMESKTQQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNDDRP--CFWGFI 122

Query: 76  VGNGRYASCLVMLNLRCLGIVFDLD 2
           V  G Y SCLVMLNLRCLGIVFDLD
Sbjct: 123 VTLGLYDSCLVMLNLRCLGIVFDLD 147


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  155 bits (392), Expect = 3e-36
 Identities = 85/141 (60%), Positives = 101/141 (71%), Gaps = 4/141 (2%)
 Frame = -1

Query: 412 VVYHGKNLLGEVDIHPIISLNHQKMNFKEIRISHFSKPSERCTPLSVLHTISNEGVSFKM 233
           +VY G +++GEV+I+P    N      KEIRISH+S+PSERC PL+VLHTI++ GV FKM
Sbjct: 5   IVYEGDDVVGEVEIYP---QNQGLELMKEIRISHYSQPSERCPPLAVLHTITSCGVCFKM 61

Query: 232 ESKG----DLMLGSLHSTLLTENKTAIMLLGEEELHLVAMSSRNNSEQHFYFWCFIVGNG 65
           ES      D  L  LHST + ENKTA+M LGEEELHLVAM S+    Q+  FW F V  G
Sbjct: 62  ESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVALG 121

Query: 64  RYASCLVMLNLRCLGIVFDLD 2
            Y+SCLVMLNLRCLGIVFDLD
Sbjct: 122 LYSSCLVMLNLRCLGIVFDLD 142