BLASTX nr result
ID: Coptis21_contig00019219
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00019219
(1404 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif... 197 4e-48
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin... 191 3e-46
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab... 191 4e-46
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin... 187 4e-45
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi... 187 7e-45
>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
gi|147853333|emb|CAN82327.1| hypothetical protein
VITISV_041807 [Vitis vinifera]
gi|297740788|emb|CBI30970.3| unnamed protein product
[Vitis vinifera]
Length = 321
Score = 197 bits (502), Expect = 4e-48
Identities = 113/268 (42%), Positives = 166/268 (61%), Gaps = 9/268 (3%)
Frame = -1
Query: 1050 EQVRNWLDLPRDVIILIFTKLGLVEILCNAQWVCSLWRKITKDPQLFCSICIPRQWKYLS 871
E+ RNW +LPRDV +I +KL VEIL +AQ+VCS WRK+ ++P + W+ +
Sbjct: 15 EEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMM---------WRNID 65
Query: 870 KRALNAY-------EKLVKESVDRSCGQLVTFSCDFPVTDDLLHYVVDRSNTLKCLRLGA 712
L E++ + +VDRS GQL++ D TD+LL+Y++DRS+ ++ LRL +
Sbjct: 66 MHNLGDLCDLGYDLEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVS 125
Query: 711 CYDISDNGFIGAVRNLPLLEELELWSFYFSKQVIKEVGKFCPKLKYLRLTEKRVRNVWNS 532
CY ISD+G ++ LPLL E++L FSK+V++ +G+ CP+LK RL + R
Sbjct: 126 CYGISDDGLSEGIKRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFR----- 180
Query: 531 NSQVNCNDEAFGIAESMPQLLRLTLFANVLGNDGLRAILDGCPRLEYLDLRTCTGINLMN 352
+ + C++EA IA++MP L L LF N L N+GL AILDGC LE LDLR C +NL
Sbjct: 181 HPHIECDEEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNL-G 239
Query: 351 GDLLKKCG-RIKDLRF*S-SDPNYDMSA 274
G+L K+C +IK LR+ + S +Y+ A
Sbjct: 240 GNLAKRCAEQIKILRYPNDSTDDYEFDA 267
>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
Length = 311
Score = 191 bits (486), Expect = 3e-46
Identities = 113/266 (42%), Positives = 154/266 (57%), Gaps = 2/266 (0%)
Frame = -1
Query: 1074 MKKRKDTLEQVRNWLDLPRDVIILIFTKLGLVEILCNAQWVCSLWRKITKDPQLFCSICI 895
M K+ + RNWLDLPRDV+ IF KLG EIL AQ VCS+WR I+K+P L+ +I
Sbjct: 1 MSSSKEAAAEERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTI-- 58
Query: 894 PRQWKYLSKRALNAYE-KLVKESVDRSCGQLVTFSCDFPVTDDLLHYVVDRSNTLKCLRL 718
+ L L+ + + ++D S G L+ + ++ TDDLLH++ ++ L+ LRL
Sbjct: 59 --DMRNLGDIGLDFHLLAMCHRAIDYSSGHLLHINVEYFGTDDLLHHITHSTSNLRSLRL 116
Query: 717 GACYDISDNGFIGAVRNLPLLEELELWSFYFSKQVIKEVGKFCPKLKYLRLTEKRVRNVW 538
CY ISD G LP LEEL++ +K ++ +G+ CP LK L+ + R
Sbjct: 117 ACCYQISDEGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNMEGYRR-- 174
Query: 537 NSNSQVNCNDEAFGIAESMPQLLRLTLFANVLGNDGLRAILDGCPRLEYLDLRTCTGINL 358
+ C++EAF IAE+MP L L LF N L N+GL AILDGCP LE LDLR C +NL
Sbjct: 175 ---PHIECDEEAFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNL 231
Query: 357 MNGDLLKKCG-RIKDLRF*SSDPNYD 283
G L K+C +IK+LR DP D
Sbjct: 232 A-GSLGKRCAEQIKELRL-PCDPTDD 255
>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
Length = 610
Score = 191 bits (485), Expect = 4e-46
Identities = 115/250 (46%), Positives = 152/250 (60%), Gaps = 3/250 (1%)
Frame = -1
Query: 1050 EQVRNWLDLPRDVIILIFTKLGLVEILCNAQWVCSLWRKITKDPQLFCSICIPRQWKYLS 871
E+VRNW +LP ++ I +LG ++IL NAQ VC WR++ KDP ++ I + L
Sbjct: 342 EEVRNWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDMDN----LG 397
Query: 870 KRALNAY--EKLVKESVDRSCGQLVTFSCDFPVTDDLLHYVVDRSNTLKCLRLGACYDIS 697
Y E + + +VDRS G LV + TD+LL+Y+ DRS+ L+ LRL CY I+
Sbjct: 398 DLGAMGYDLEIMCRHAVDRSQGGLVEIDIWYFGTDELLNYIADRSSNLRTLRLIMCYPIA 457
Query: 696 DNGFIGAVRNLPLLEELELWSFYFSKQVIKEVGKFCPKLKYLRLTEKRVRNVWNSNSQVN 517
D GFI AV LPL+E LEL S + +K VG+ CP LK L+L + N
Sbjct: 458 DEGFIEAVVKLPLIEYLELSHCSLSGESLKVVGQSCPNLKTLKLNSEPDPKF---NDDEF 514
Query: 516 CNDEAFGIAESMPQLLRLTLFANVLGNDGLRAILDGCPRLEYLDLRTCTGINLMNGDLLK 337
N+EA IAESMP+L L LF N+L N GL AILDGCP LE+LDLR C+ ++L GDL K
Sbjct: 515 NNEEALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDL-TGDLEK 573
Query: 336 KC-GRIKDLR 310
+C RIKDL+
Sbjct: 574 RCVERIKDLK 583
Score = 164 bits (415), Expect = 5e-38
Identities = 107/256 (41%), Positives = 142/256 (55%), Gaps = 12/256 (4%)
Frame = -1
Query: 1041 RNWLDLPRDVIILIFTKLGLVEILCNAQWVCSLWRKITKDPQLFCSICIPRQWKYLSKRA 862
RNW +LP ++ I +LG+VEIL NAQ VC WR++ KDP ++ I I R
Sbjct: 7 RNWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNS----GNRD 62
Query: 861 LNAYE--KLVKESVDRSCGQLVTFSCDFPVTDDLLHYVVDR--------SNTLKCLRLGA 712
+ Y+ + + +VDRS G L+ ++ TD LL Y+ DR S+ L+ LRL
Sbjct: 63 IFKYDLDSMCRHAVDRSQGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLVR 122
Query: 711 CYDISDNGFIGAVRNLPLLEELELWSFYFSKQVIKEVGKFCPKLKYLRLTEK-RVRNVWN 535
C+ I+D G AV LPLLE+LE+ FS + + VG+ CP L L+L + RV V N
Sbjct: 123 CHQITDKGVAEAVVKLPLLEDLEVSYCSFSGECLSVVGQSCPHLTTLKLNRRPRVEFVIN 182
Query: 534 SNSQVNCNDEAFGIAESMPQLLRLTLFANVLGNDGLRAILDGCPRLEYLDLRTCTGINLM 355
A IAESMP+L L L N L N GL AILD C L++LDLR C INL+
Sbjct: 183 MRDH-----NAIAIAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLV 237
Query: 354 NGDLLKKC-GRIKDLR 310
D +K+C RIK LR
Sbjct: 238 E-DFMKQCVERIKYLR 252
>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
Length = 318
Score = 187 bits (476), Expect = 4e-45
Identities = 112/259 (43%), Positives = 152/259 (58%), Gaps = 3/259 (1%)
Frame = -1
Query: 1050 EQVRNWLDLPRDVIILIFTKLGLVEILCNAQWVCSLWRKITKDPQLFCSICIPRQWKYLS 871
E+ RNWLDLPRDV+ IF KLG +EIL AQ VCS+WR I+K+P L+ +I + +
Sbjct: 15 EEERNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNSGDIET 74
Query: 870 KRALNAYEKLVKESVDRSCGQLVTFSCDFPVTDDLLHYVVDRSNTLKCLRLGACYDISDN 691
A + ++D S G L+ + ++ TDDLL ++ ++ L+ LRL CY ISD
Sbjct: 75 NFVFLA---MCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISDE 131
Query: 690 GFIGAVRNLPLLEELELW--SFYFSKQVIKEVGKFCPKLKYLRLTEKRVRNVWNSNSQVN 517
G + LP LEEL++ SF ++ ++ VG+ C LK L+ K R +
Sbjct: 132 GLCEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNMKGYRR-----PHIE 186
Query: 516 CNDEAFGIAESMPQLLRLTLFANVLGNDGLRAILDGCPRLEYLDLRTCTGINLMNGDLLK 337
C++EAF IAE+MP L L LF N L N+GL AILDGCP LE LDLR C +NL G L K
Sbjct: 187 CDEEAFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLA-GSLGK 245
Query: 336 KCG-RIKDLRF*SSDPNYD 283
+C +IK+LR DP D
Sbjct: 246 RCAEQIKELRL-PCDPTDD 263
>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
gi|449490588|ref|XP_004158648.1| PREDICTED: F-box protein
SKIP19-like [Cucumis sativus]
Length = 311
Score = 187 bits (474), Expect = 7e-45
Identities = 119/264 (45%), Positives = 152/264 (57%), Gaps = 3/264 (1%)
Frame = -1
Query: 1041 RNWLDLPRDVIILIFTKLGLVEILCNAQWVCSLWRKITKDPQLFCSICI--PRQWKYLSK 868
RNWL+LP DV +I KLG VEIL AQ+VCS WRKI +DP ++ I + P W +
Sbjct: 15 RNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDY 74
Query: 867 RALNAYEKLVKESVDRSCGQLVTFSCDFPVTDDLLHYVVDRSNTLKCLRLGACYDISDNG 688
E+L +++V RSCGQL+ F+ + TDDLL Y+ N L LRL C ISD G
Sbjct: 75 NL----EELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISDEG 130
Query: 687 FIGAVRNLPLLEELELWSFYFSKQVIKEVGKFCPKLKYLRLTEKRVRNVWNSNSQVNCND 508
+ AV LPLLE+LEL F + ++ +G+ CP LK L+L + R +V C+
Sbjct: 131 LVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYR-------RVECDK 183
Query: 507 EAFGIAESMPQLLRLTLFANVLGNDGLRAILDGCPRLEYLDLRTCTGINLMNGDLLKKCG 328
A IAE+MP L L +F N L N GL AILDGC LE LDLR C +NL G L KC
Sbjct: 184 GALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLA-GQLGAKCS 242
Query: 327 -RIKDLRF*SSDPNYDMSAWTILI 259
+IKDLR DP D T ++
Sbjct: 243 EKIKDLRL-PHDPTDDCEFTTEIV 265