BLASTX nr result

ID: Coptis21_contig00019206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019206
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284609.1| PREDICTED: centromere protein S [Vitis vinif...   156   4e-36
ref|XP_002321749.1| predicted protein [Populus trichocarpa] gi|2...   153   3e-35
emb|CBI15755.3| unnamed protein product [Vitis vinifera]              152   9e-35
ref|XP_004145141.1| PREDICTED: centromere protein S-like isoform...   148   1e-33
ref|NP_199906.1| Histone 2A domain-containing protein [Arabidops...   147   2e-33

>ref|XP_002284609.1| PREDICTED: centromere protein S [Vitis vinifera]
           gi|147791927|emb|CAN67893.1| hypothetical protein
           VITISV_040390 [Vitis vinifera]
          Length = 135

 Score =  156 bits (395), Expect = 4e-36
 Identities = 75/110 (68%), Positives = 97/110 (88%), Gaps = 2/110 (1%)
 Frame = +1

Query: 76  RFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFTEQLGKDLELFAQHASRKSVNMED 255
           RF LS +SI E++AKK+DMEIS+P++ACI+DLAF++TEQL KDLELF+QHA RK+VNMED
Sbjct: 23  RFRLSTISIVEAQAKKSDMEISEPIVACISDLAFKYTEQLAKDLELFSQHAGRKTVNMED 82

Query: 256 VILSAHRNEHLAASLRSFCHELKGKEPQGERKRKKSSK--DKPASDILHI 399
           VILSAHRN+HLA+SLRSFC++LK KE   ERKRKK+S+  DK ++ ++HI
Sbjct: 83  VILSAHRNKHLASSLRSFCNDLKAKEIPSERKRKKASRKEDKASTSVVHI 132


>ref|XP_002321749.1| predicted protein [Populus trichocarpa] gi|222868745|gb|EEF05876.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  153 bits (387), Expect = 3e-35
 Identities = 77/110 (70%), Positives = 92/110 (83%), Gaps = 2/110 (1%)
 Frame = +1

Query: 76  RFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFTEQLGKDLELFAQHASRKSVNMED 255
           RF LSA+SIAE+EAKKN +EIS+P+ +CIADLA  +TEQL K+LE FAQHA RKSVNMED
Sbjct: 24  RFRLSAISIAENEAKKNGVEISEPITSCIADLALNYTEQLAKELEAFAQHAGRKSVNMED 83

Query: 256 VILSAHRNEHLAASLRSFCHELKGKEPQGERKRKKSSK--DKPASDILHI 399
           VILSAHRNEHL A LRSFC++LK KEPQ ERKR+K+SK  DK  +  ++I
Sbjct: 84  VILSAHRNEHLTALLRSFCNDLKEKEPQSERKRRKTSKKEDKATTSAVNI 133


>emb|CBI15755.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  152 bits (383), Expect = 9e-35
 Identities = 75/111 (67%), Positives = 97/111 (87%), Gaps = 3/111 (2%)
 Frame = +1

Query: 76  RFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFT-EQLGKDLELFAQHASRKSVNME 252
           RF LS +SI E++AKK+DMEIS+P++ACI+DLAF++T EQL KDLELF+QHA RK+VNME
Sbjct: 23  RFRLSTISIVEAQAKKSDMEISEPIVACISDLAFKYTAEQLAKDLELFSQHAGRKTVNME 82

Query: 253 DVILSAHRNEHLAASLRSFCHELKGKEPQGERKRKKSSK--DKPASDILHI 399
           DVILSAHRN+HLA+SLRSFC++LK KE   ERKRKK+S+  DK ++ ++HI
Sbjct: 83  DVILSAHRNKHLASSLRSFCNDLKAKEIPSERKRKKASRKEDKASTSVVHI 133


>ref|XP_004145141.1| PREDICTED: centromere protein S-like isoform 1 [Cucumis sativus]
           gi|449454800|ref|XP_004145142.1| PREDICTED: centromere
           protein S-like isoform 2 [Cucumis sativus]
           gi|449473866|ref|XP_004154006.1| PREDICTED: centromere
           protein S-like isoform 1 [Cucumis sativus]
           gi|449473870|ref|XP_004154007.1| PREDICTED: centromere
           protein S-like isoform 2 [Cucumis sativus]
           gi|449523429|ref|XP_004168726.1| PREDICTED: centromere
           protein S-like isoform 1 [Cucumis sativus]
           gi|449523431|ref|XP_004168727.1| PREDICTED: centromere
           protein S-like isoform 2 [Cucumis sativus]
          Length = 129

 Score =  148 bits (374), Expect = 1e-33
 Identities = 75/110 (68%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
 Frame = +1

Query: 76  RFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFTEQLGKDLELFAQHASRKSVNMED 255
           RF LS++SIAE+EA K+ MEIS+PVM C+ADLAF++T+QL KDLELFAQHA RKSVN ED
Sbjct: 18  RFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTKQLAKDLELFAQHAGRKSVNTED 77

Query: 256 VILSAHRNEHLAASLRSFCHELKGKEPQGERKRKKS-SKDKPASDILHIS 402
           VIL+AHRNEHLAA L S C++LK KEPQ ERKRKK+  KD      +HI+
Sbjct: 78  VILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDRDRGAVHIA 127


>ref|NP_199906.1| Histone 2A domain-containing protein [Arabidopsis thaliana]
           gi|9758240|dbj|BAB08739.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008629|gb|AED96012.1|
           Histone 2A domain-containing protein [Arabidopsis
           thaliana]
          Length = 242

 Score =  147 bits (372), Expect = 2e-33
 Identities = 72/100 (72%), Positives = 84/100 (84%)
 Frame = +1

Query: 76  RFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFTEQLGKDLELFAQHASRKSVNMED 255
           RF LSA+SIAE+EAKKN MEI  PV+AC+ADLAF++ E + KDLELFA HA RK VNM+D
Sbjct: 127 RFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKYAENVAKDLELFAHHAGRKVVNMDD 186

Query: 256 VILSAHRNEHLAASLRSFCHELKGKEPQGERKRKKSSKDK 375
           V+LSAHRN++LAASLRS C+ELK KEPQ ERKRKK S  K
Sbjct: 187 VVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKK 226


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