BLASTX nr result

ID: Coptis21_contig00019176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019176
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306946.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002279403.1| PREDICTED: uncharacterized protein LOC100252...    87   1e-15
emb|CAN63052.1| hypothetical protein VITISV_027810 [Vitis vinifera]    87   1e-15
ref|XP_002305522.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
gb|ABK93023.1| unknown [Populus trichocarpa]                           86   2e-15

>ref|XP_002306946.1| predicted protein [Populus trichocarpa] gi|222856395|gb|EEE93942.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 36/53 (67%), Positives = 46/53 (86%)
 Frame = -3

Query: 213 EERNKMTCKVCNSRNSCILFLPCRHLCSCKSCESLLDSCPVCKSVKKACIDVY 55
           E + +M CK CNSR+SCI+FLPCRHLCSCKSC++ L SCPVCKSVK+A ++V+
Sbjct: 214 ESQKRMVCKGCNSRSSCIIFLPCRHLCSCKSCDAFLGSCPVCKSVKEASMEVF 266


>ref|XP_002279403.1| PREDICTED: uncharacterized protein LOC100252373 [Vitis vinifera]
          Length = 286

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = -3

Query: 213 EERNKMTCKVCNSRNSCILFLPCRHLCSCKSCESLLDSCPVCKSVKKACIDVYM 52
           ++  KM CK CNSR SC LF PCRHLCSCKSCE LL  CPVCKSVK+A ++V++
Sbjct: 232 DQCKKMACKRCNSRTSCFLFFPCRHLCSCKSCEPLLGCCPVCKSVKEASMEVFL 285


>emb|CAN63052.1| hypothetical protein VITISV_027810 [Vitis vinifera]
          Length = 681

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = -3

Query: 213 EERNKMTCKVCNSRNSCILFLPCRHLCSCKSCESLLDSCPVCKSVKKACIDVYM 52
           ++  KM CK CNSR SC LF PCRHLCSCKSCE LL  CPVCKSVK+A ++V++
Sbjct: 627 DQCKKMACKRCNSRTSCFLFFPCRHLCSCKSCEPLLGCCPVCKSVKEASMEVFL 680


>ref|XP_002305522.1| predicted protein [Populus trichocarpa] gi|222848486|gb|EEE86033.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = -3

Query: 198 MTCKVCNSRNSCILFLPCRHLCSCKSCESLLDSCPVCKSVKKACIDVYM 52
           M CK CNSRNSCILFLPCRHLCSCK+C++ LD+CPVC++ KKA I+  M
Sbjct: 206 MVCKRCNSRNSCILFLPCRHLCSCKACDACLDACPVCQTPKKASIEALM 254


>gb|ABK93023.1| unknown [Populus trichocarpa]
          Length = 271

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = -3

Query: 198 MTCKVCNSRNSCILFLPCRHLCSCKSCESLLDSCPVCKSVKKACIDVYM 52
           M CK CNSRNSCILFLPCRHLCSCK+C++ LD+CPVC++ KKA I+  M
Sbjct: 222 MVCKRCNSRNSCILFLPCRHLCSCKACDACLDACPVCQTPKKASIEALM 270


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