BLASTX nr result

ID: Coptis21_contig00019174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019174
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36665.3| unnamed protein product [Vitis vinifera]              151   6e-35
emb|CAN68120.1| hypothetical protein VITISV_024174 [Vitis vinifera]   151   6e-35
ref|XP_002533359.1| conserved hypothetical protein [Ricinus comm...   127   1e-27
ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, ...   121   5e-26
emb|CAN68119.1| hypothetical protein VITISV_024173 [Vitis vinifera]   121   5e-26

>emb|CBI36665.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/99 (69%), Positives = 79/99 (79%)
 Frame = -2

Query: 304 SKEFYEVYGMRTGFTIRNGHIRRSHKDHSIIGREFVCTKEGFRAKKYLNMEKRILPPRPI 125
           ++EFYE+YG R GFTIRN   RRS KD+SIIGREFVC+KEGFR +KY N E RILP RPI
Sbjct: 90  AREFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRVEKYANREHRILPSRPI 149

Query: 124 TREGCNATLRVTKKEEGKWVVSGFVNEHSHALNPSKTTP 8
           TREGCNA LR+  K+EGKW + GFV EH+H LNPSK  P
Sbjct: 150 TREGCNAMLRIAAKDEGKWAIYGFVKEHNHELNPSKMPP 188


>emb|CAN68120.1| hypothetical protein VITISV_024174 [Vitis vinifera]
          Length = 439

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/99 (69%), Positives = 79/99 (79%)
 Frame = -2

Query: 304 SKEFYEVYGMRTGFTIRNGHIRRSHKDHSIIGREFVCTKEGFRAKKYLNMEKRILPPRPI 125
           ++EFYE+YG R GFTIRN   RRS KD+SIIGREFVC+KEGFR +KY N E RILP RPI
Sbjct: 264 AREFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRVEKYANREHRILPSRPI 323

Query: 124 TREGCNATLRVTKKEEGKWVVSGFVNEHSHALNPSKTTP 8
           TREGCNA LR+  K+EGKW + GFV EH+H LNPSK  P
Sbjct: 324 TREGCNAMLRIAAKDEGKWAIYGFVKEHNHELNPSKMPP 362



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
 Frame = -2

Query: 304 SKEFYEVYGMRTGFTIRNGHIRRSHKDHSIIGREFVCTKEGFRAKKYLNMEKRILPPRPI 125
           ++ FYE Y  R GF  R    R+S +D SII R   C KEGF          RI   R  
Sbjct: 43  ARAFYEEYARRVGFLTRIISSRKSERDGSIISRRLACNKEGFNLNSQKTGRVRI-RKRES 101

Query: 124 TREGCNATLRVTKKEEGKWVVSGFVNEHSHAL----NPSKTTPPQ 2
            REGC A + V +++ GKWVV+ FV EH+H L      S+ TP +
Sbjct: 102 KREGCMAMILVKREKLGKWVVTKFVREHNHPLVISSGNSRPTPDE 146


>ref|XP_002533359.1| conserved hypothetical protein [Ricinus communis]
           gi|223526799|gb|EEF29021.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 247

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/99 (59%), Positives = 72/99 (72%)
 Frame = -2

Query: 304 SKEFYEVYGMRTGFTIRNGHIRRSHKDHSIIGREFVCTKEGFRAKKYLNMEKRILPPRPI 125
           ++EFYE+YG + GFTIRN  IRRS KD+SIIGREFVC+KEGFRA K    E  ++   P 
Sbjct: 72  AREFYEMYGRQMGFTIRNNRIRRSLKDNSIIGREFVCSKEGFRAGKCTKRENGVISSLPA 131

Query: 124 TREGCNATLRVTKKEEGKWVVSGFVNEHSHALNPSKTTP 8
           TREGC+A LR+  K+  KWV+ GF  EH+H LNPSK  P
Sbjct: 132 TREGCSAMLRIAAKDGAKWVIYGFNKEHNHELNPSKIPP 170


>ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, partial [Vitis
           vinifera]
          Length = 244

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/97 (57%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
 Frame = -2

Query: 304 SKEFYEVYGMRTGFTIRNGHIRRSHKDHSIIGREFVCTKEGFRAKKYLNMEKRILPPRPI 125
           ++EFY  YG RTGFT+R  H RRS  ++ +IG++FVC+KEGFRAKKY+  + R+LPP PI
Sbjct: 72  AREFYVAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVYRKDRVLPPPPI 131

Query: 124 TREGCNATLRVTKKEEGKWVVSGFVNEHSHAL-NPSK 17
           TREGC A +R+  ++  KWVV+ FV EHSH L +PSK
Sbjct: 132 TREGCQAMIRLALRDGAKWVVTKFVKEHSHKLMSPSK 168


>emb|CAN68119.1| hypothetical protein VITISV_024173 [Vitis vinifera]
          Length = 270

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/97 (57%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
 Frame = -2

Query: 304 SKEFYEVYGMRTGFTIRNGHIRRSHKDHSIIGREFVCTKEGFRAKKYLNMEKRILPPRPI 125
           ++EFY  YG RTGFT+R  H RRS  ++ +IG++FVC+KEGFRAKKY+  + R+LPP PI
Sbjct: 54  NREFYVAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVYRKDRVLPPPPI 113

Query: 124 TREGCNATLRVTKKEEGKWVVSGFVNEHSHAL-NPSK 17
           TREGC A +R+  ++  KWVV+ FV EHSH L +PSK
Sbjct: 114 TREGCQAMIRLALRDGAKWVVTKFVKEHSHKLMSPSK 150


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