BLASTX nr result

ID: Coptis21_contig00019155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019155
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285740.1| PREDICTED: uncharacterized protein LOC100260...   127   5e-27
ref|XP_002304851.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-19
ref|XP_002299100.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-17
ref|XP_002334049.1| predicted protein [Populus trichocarpa] gi|2...    94   6e-17
ref|NP_187957.3| uncharacterized protein [Arabidopsis thaliana] ...    76   2e-11

>ref|XP_002285740.1| PREDICTED: uncharacterized protein LOC100260500 [Vitis vinifera]
           gi|297746488|emb|CBI16544.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  127 bits (320), Expect = 5e-27
 Identities = 67/133 (50%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
 Frame = +1

Query: 406 MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENTPNVPTTVSSVPDGVVQLSLETDEVEK 585
           MRVLF K+HCPSFICFCKPSPH+ +P PLKLEN P+VP ++ S+PDG   LS +T EV+ 
Sbjct: 1   MRVLFCKIHCPSFICFCKPSPHIYTPGPLKLENNPHVPPSIVSIPDGENHLSGDTIEVKD 60

Query: 586 VSLDGKQEVEVVPXXXXXXXXXQAG--KEGEKGKVQWMDFFGKELAEIKXXXXXXXXXXX 759
            S DGKQ  E +          + G  KE  K +VQWMDF GKEL EIK           
Sbjct: 61  GSSDGKQPDENLLKTSLKKAPSEPGTPKEVGKKRVQWMDFLGKELVEIKEFESSETGDTD 120

Query: 760 XXXXXIRGCICVI 798
                 RGC+C+I
Sbjct: 121 TEAEDNRGCVCII 133


>ref|XP_002304851.1| predicted protein [Populus trichocarpa] gi|222842283|gb|EEE79830.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  102 bits (254), Expect = 2e-19
 Identities = 59/114 (51%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
 Frame = +1

Query: 406 MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENTPNVPTT-VSSVPDG------VVQLSL 564
           MRVLFSK+HCPSFICFCKPSP + +P PLKLEN+P+VP+T V SV D       V+  S+
Sbjct: 1   MRVLFSKIHCPSFICFCKPSPSIYTPGPLKLENSPHVPSTAVISVADASSNDNHVLSDSI 60

Query: 565 ETDEVEKVSLDGKQEVEVVPXXXXXXXXXQAGKEGEKGKVQWMDFFGKELAEIK 726
           E  E   V +DGKQ                  KE +K KVQW+DF GKEL EI+
Sbjct: 61  EVKE-GSVGVDGKQPESQNSLKSSLKRAAFDSKEVDKKKVQWIDFLGKELVEIR 113


>ref|XP_002299100.1| predicted protein [Populus trichocarpa] gi|222846358|gb|EEE83905.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 56/115 (48%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
 Frame = +1

Query: 403 FMRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENTPNVPTT-------VSSVPDGVVQLS 561
           FMRVLF K+HCP FICFCKPSP +  P PLKLEN+P+VP+T        S   D V+  S
Sbjct: 17  FMRVLFCKIHCP-FICFCKPSPRIYGPAPLKLENSPHVPSTAVISVVDASCDDDHVLNDS 75

Query: 562 LETDEVEKVSLDGKQEVEVVPXXXXXXXXXQAGKEGEKGKVQWMDFFGKELAEIK 726
           +E  E   V +DGKQ                  KE +K KV+WMDF GKEL EI+
Sbjct: 76  VEVKE-GSVGVDGKQSQAQNGLKSSLKKADFDSKEVDKKKVRWMDFLGKELVEIR 129


>ref|XP_002334049.1| predicted protein [Populus trichocarpa] gi|222839667|gb|EEE77990.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 55/114 (48%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = +1

Query: 406 MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENTPNVPTT-------VSSVPDGVVQLSL 564
           MRVLF K+HCP FICFCKPSP +  P PLKLEN+P+VP+T        S   D V+  S+
Sbjct: 1   MRVLFCKIHCP-FICFCKPSPRIYGPAPLKLENSPHVPSTAVISVVDASCDDDHVLNDSV 59

Query: 565 ETDEVEKVSLDGKQEVEVVPXXXXXXXXXQAGKEGEKGKVQWMDFFGKELAEIK 726
           E  E   V +DGKQ                  KE +K KV+WMDF GKEL EI+
Sbjct: 60  EVKE-GSVGVDGKQSQAQNGLKSSLKKADFDSKEVDKKKVRWMDFLGKELVEIR 112


>ref|NP_187957.3| uncharacterized protein [Arabidopsis thaliana]
           gi|332641842|gb|AEE75363.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 172

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 57/161 (35%), Positives = 72/161 (44%), Gaps = 30/161 (18%)
 Frame = +1

Query: 406 MRVLFSKLHCPSFICFCKPSPHLLSPIPLKLENT-PNVPTTVSSVP-------------- 540
           MRVL  K+ CPSFICFCKPSPH+ +   LKLENT P V ++ + V               
Sbjct: 13  MRVLLCKIQCPSFICFCKPSPHIYASGSLKLENTFPQVSSSTTVVDDRDHDDNDDDDAHV 72

Query: 541 -------DGVVQLSLETDEVEKVSLDGKQEV-------EVVPXXXXXXXXXQA-GKEGEK 675
                  D V  L  E    E  +L+GK+E        E++           A G   EK
Sbjct: 73  EEEEVVVDHVDGLLTEVVREEDCALEGKKEEEESLSNGEILKSSLKKEVLDSADGGRKEK 132

Query: 676 GKVQWMDFFGKELAEIKXXXXXXXXXXXXXXXXIRGCICVI 798
            KVQW+D  GKELAEI+                 + C+CVI
Sbjct: 133 KKVQWVDLMGKELAEIREFESSEEEDVRYDGD--QSCVCVI 171


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