BLASTX nr result

ID: Coptis21_contig00019153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019153
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244...    92   1e-16
emb|CBI23474.3| unnamed protein product [Vitis vinifera]               92   1e-16
emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]    91   2e-16
gb|AAC33277.1| cotton fiber expressed protein 2 [Gossypium hirsu...    81   2e-13
gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]            81   2e-13

>ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244739 [Vitis vinifera]
          Length = 330

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 76/223 (34%), Positives = 109/223 (48%), Gaps = 13/223 (5%)
 Frame = -3

Query: 630 SNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRSWLTPPYLYVXXX 451
           S+ ++   K AL S+ ++S+A+ L  ++ VIS F +  +P +W SFRSWL PPYLYV   
Sbjct: 8   SSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVMWSSFRSWLKPPYLYVIIN 67

Query: 450 XXXXXIAASSRFQRNKIEEQMVL-----DDELVKIQEVLGSPVEYEEPVVLRSPVDIQHV 286
                IAASS+F R   +++        +DE  +    + +P E+   V L +P+     
Sbjct: 68  GIIITIAASSKFHRMNHQDRPETAAKDPEDERTEFTYEMKNPPEF---VGLETPI----- 119

Query: 285 TKNSMPEFEAFEATVPEIMLLEGKKXXXXXXXXXXXXLAIWGATEMP------IRKESME 124
                  +E  E T+ E+     K             L I  +T  P      +R+ES E
Sbjct: 120 ------VYEQREVTISEV-----KNVADSPVVEDEEELVISRSTTPPLPPSPLLRRESSE 168

Query: 123 IFPAVVDDLFMSKGKPPVSGRFGHRKIAKGSPE--GGKSLRVT 1
           I P    +  +S  KP VS RFGHRK  K SPE  GGK LRV+
Sbjct: 169 I-PL---ECLLSTEKPLVSSRFGHRKPIKASPEASGGKVLRVS 207


>emb|CBI23474.3| unnamed protein product [Vitis vinifera]
          Length = 304

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 76/223 (34%), Positives = 109/223 (48%), Gaps = 13/223 (5%)
 Frame = -3

Query: 630 SNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRSWLTPPYLYVXXX 451
           S+ ++   K AL S+ ++S+A+ L  ++ VIS F +  +P +W SFRSWL PPYLYV   
Sbjct: 8   SSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVMWSSFRSWLKPPYLYVIIN 67

Query: 450 XXXXXIAASSRFQRNKIEEQMVL-----DDELVKIQEVLGSPVEYEEPVVLRSPVDIQHV 286
                IAASS+F R   +++        +DE  +    + +P E+   V L +P+     
Sbjct: 68  GIIITIAASSKFHRMNHQDRPETAAKDPEDERTEFTYEMKNPPEF---VGLETPI----- 119

Query: 285 TKNSMPEFEAFEATVPEIMLLEGKKXXXXXXXXXXXXLAIWGATEMP------IRKESME 124
                  +E  E T+ E+     K             L I  +T  P      +R+ES E
Sbjct: 120 ------VYEQREVTISEV-----KNVADSPVVEDEEELVISRSTTPPLPPSPLLRRESSE 168

Query: 123 IFPAVVDDLFMSKGKPPVSGRFGHRKIAKGSPE--GGKSLRVT 1
           I P    +  +S  KP VS RFGHRK  K SPE  GGK LRV+
Sbjct: 169 I-PL---ECLLSTEKPLVSSRFGHRKPIKASPEASGGKVLRVS 207


>emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]
          Length = 407

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 10/230 (4%)
 Frame = -3

Query: 660 LHHKTMA--NLFSNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRS 487
           +H + MA  +  S+ ++   K AL S+ ++S+A+ L  ++ VIS F +  +P  W SFRS
Sbjct: 73  VHRRRMAFVSRSSSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVXWSSFRS 132

Query: 486 WLTPPYLYVXXXXXXXXIAASSRFQRNKIEEQMVL-----DDELVKIQEVLGSPVEYEEP 322
           WL PPYLYV        IAASS+F R   +++        +DE  +    + +P E+   
Sbjct: 133 WLKPPYLYVIINGIIITIAASSKFHRMNHQDRPETAAKDPEDERTEFTYEMKNPPEF--- 189

Query: 321 VVLRSPVDIQHVTKNSMPEFEAFEATVPEIMLLEGKKXXXXXXXXXXXXLAIWGATEMP- 145
           V L +P+            +E  E T+ E+  +                         P 
Sbjct: 190 VGLETPI-----------VYEQREVTISEVKXVADSPVVEDEEELXISRSTTPPLPPSPL 238

Query: 144 IRKESMEIFPAVVDDLFMSKGKPPVSGRFGHRKIAKGSPE--GGKSLRVT 1
           +R+ES EI P    +  +S  KP VS RFGHRK  K SPE  GGK LRV+
Sbjct: 239 LRRESSEI-PL---ECLLSTEKPLVSSRFGHRKPIKASPEASGGKVLRVS 284


>gb|AAC33277.1| cotton fiber expressed protein 2 [Gossypium hirsutum]
          Length = 275

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 66/210 (31%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
 Frame = -3

Query: 630 SNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRSWLTPPYLYVXXX 451
           ++ +I   K  L S  IL I + L +++ ++  F + Q P  W  FRSWL PPYLYV   
Sbjct: 4   ASTWILSLKVFLISTGILGIVLGLKISVPLVLEFSVSQAPLWWSGFRSWLKPPYLYVVIN 63

Query: 450 XXXXXIAASSRFQRNKIE-EQMVLDDELVKIQEVLGSPVEYEEPVVLRSPVDIQHVTKNS 274
                IAASSRF +N  E +QM       KI       VEYE     +S  D   V  + 
Sbjct: 64  GIIITIAASSRFNQNNGEKDQMEQMQPRPKISADQQPMVEYE----TKSGWDSDAVESSD 119

Query: 273 MPEFEAFEATVPEIMLLEGKKXXXXXXXXXXXXLAIWGATEMPIRKESMEIFPAVVDDLF 94
               E       E  + E +               I  +  +P  +      P    D  
Sbjct: 120 FVYEENQRGEEVETRVSEEESNVAVEDDRDGNEFVISKSEWIPPSRTDSSEIPL---DAL 176

Query: 93  MSKGKPPVSGRFGHRKIAKGSPEGGKSLRV 4
           + + KP  S RFGHRK  K +PEGG++L+V
Sbjct: 177 LIQEKPAPSSRFGHRKPVKVNPEGGRALKV 206


>gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]
          Length = 331

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 65/209 (31%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
 Frame = -3

Query: 630 SNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRSWLTPPYLYVXXX 451
           ++ +I   K  L S  IL I + L +++ ++  F + Q P  W  FRSWL PPYLYV   
Sbjct: 4   ASTWILSLKVFLISTGILGIVLGLKISVPLVLEFSVSQAPLWWSGFRSWLKPPYLYVVIN 63

Query: 450 XXXXXIAASSRFQRNKIE-EQMVLDDELVKIQEVLGSPVEYEEPVVLRSPVDIQHVTKNS 274
                IAASSRF +N  E +QM       KI       VEYE     +S  D   V  + 
Sbjct: 64  GIIITIAASSRFNQNNGEKDQMEQMQPRPKISADQQPMVEYE----TKSGWDSDAVESSD 119

Query: 273 MPEFEAFEATVPEIMLLEGKKXXXXXXXXXXXXLAIWGATEMPIRKESMEIFPAVVDDLF 94
               E       E  + E +               I  +  +P  +      P    D  
Sbjct: 120 FVYEENQRGEEVETRVSEEESNVAVKDDRDGNEFVISKSEWIPPSRTDSSEIPL---DAL 176

Query: 93  MSKGKPPVSGRFGHRKIAKGSPEGGKSLR 7
           + + KP  S RFGHRK  K +PEGG++L+
Sbjct: 177 LIQEKPAPSSRFGHRKPVKANPEGGRALK 205


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