BLASTX nr result
ID: Coptis21_contig00019149
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00019149 (364 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containi... 200 1e-49 ref|XP_002298285.1| predicted protein [Populus trichocarpa] gi|2... 198 3e-49 ref|XP_002878256.1| pentatricopeptide repeat-containing protein ... 198 4e-49 ref|NP_974457.1| pentatricopeptide repeat-containing protein [Ar... 197 1e-48 ref|NP_191463.2| pentatricopeptide repeat-containing protein [Ar... 197 1e-48 >ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040 [Vitis vinifera] gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera] Length = 548 Score = 200 bits (508), Expect = 1e-49 Identities = 95/121 (78%), Positives = 108/121 (89%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 GY PSVISHTALMEAYGKG QYNKAE++FRRM SSGPEPSA TYQ+ILK FVE +KF+EA Sbjct: 170 GYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEA 229 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361 E FETLLDD+ SPLKPDQKMFHMMIYMY+K+GNY+KARK F M +RG+PQST+T+NSL Sbjct: 230 EETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSL 289 Query: 362 M 364 M Sbjct: 290 M 290 Score = 63.2 bits (152), Expect = 2e-08 Identities = 32/121 (26%), Positives = 63/121 (52%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 G P V+S+ L+ AYGK + +A A+F M +G P+ Y I+L F + ++A Sbjct: 310 GLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 369 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361 ++F+++ D+ + PD + M+ Y + + + A K F ++ G + +T+ +L Sbjct: 370 RTVFKSMRRDRCT---PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTL 426 Query: 362 M 364 + Sbjct: 427 I 427 >ref|XP_002298285.1| predicted protein [Populus trichocarpa] gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa] Length = 575 Score = 198 bits (504), Expect = 3e-49 Identities = 93/121 (76%), Positives = 110/121 (90%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 GY P+V+SHTALMEAYG+GG+YN AEAIFRRMQ+SGPEPSA TYQIILKTFVE +KF+EA Sbjct: 146 GYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEA 205 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361 E +FETLL+ + SPL+PDQKMFHMMIYM KK+GNY+KARK FA M +RG+PQST+T+NSL Sbjct: 206 EEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSL 265 Query: 362 M 364 M Sbjct: 266 M 266 Score = 63.2 bits (152), Expect = 2e-08 Identities = 33/121 (27%), Positives = 63/121 (52%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 G P V+S+ L++AYG+ + +A A+F M +G PS Y I+L F + E+A Sbjct: 286 GLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQA 345 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361 +F+++ D+ + PD + M+ Y + + + A F ++ GL + +T+ +L Sbjct: 346 RVVFKSMRRDRCT---PDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGAL 402 Query: 362 M 364 + Sbjct: 403 I 403 Score = 55.5 bits (132), Expect = 4e-06 Identities = 30/105 (28%), Positives = 57/105 (54%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 G P S +++ +LM Y + I+ +MQ SG P +Y +++K + A + EEA Sbjct: 254 GVPQSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEA 310 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKM 316 ++FE +LD + ++P K +++++ + SG ++AR F M Sbjct: 311 LAVFEEMLD---AGVRPSHKAYNILLDAFAISGMVEQARVVFKSM 352 >ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 582 Score = 198 bits (503), Expect = 4e-49 Identities = 94/121 (77%), Positives = 109/121 (90%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 G P+VIS+TALME+YG+GG+ N AEAIFRRMQSSGPEPSA TYQIILKTFVE DKF+EA Sbjct: 169 GSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEA 228 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361 E +FETLLD+K SPLKPDQKM+HMMIYMYKK+GNYDKARK F+ M +G+PQST+T+NSL Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSL 288 Query: 362 M 364 M Sbjct: 289 M 289 Score = 56.2 bits (134), Expect = 3e-06 Identities = 30/105 (28%), Positives = 58/105 (55%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 G P S +++ +LM Y + I+ +MQ SG +P +Y +++K + A + EEA Sbjct: 277 GVPQSTVTYNSLMSFETN---YKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEA 333 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKM 316 S+FE +LD + ++P K +++++ + SG ++A+ F M Sbjct: 334 LSVFEEMLD---AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375 >ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 590 Score = 197 bits (500), Expect = 1e-48 Identities = 93/121 (76%), Positives = 109/121 (90%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 G P+VIS+TALME+YG+GG+ N AEAIFRRMQSSGPEPSA TYQIILKTFVE DKF+EA Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361 E +FETLLD+K SPLKPDQKM+HMMIYMYKK+GNY+KARK F+ M +G+PQST+T+NSL Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295 Query: 362 M 364 M Sbjct: 296 M 296 >ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040 gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 583 Score = 197 bits (500), Expect = 1e-48 Identities = 93/121 (76%), Positives = 109/121 (90%) Frame = +2 Query: 2 GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181 G P+VIS+TALME+YG+GG+ N AEAIFRRMQSSGPEPSA TYQIILKTFVE DKF+EA Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228 Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361 E +FETLLD+K SPLKPDQKM+HMMIYMYKK+GNY+KARK F+ M +G+PQST+T+NSL Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288 Query: 362 M 364 M Sbjct: 289 M 289