BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019149
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containi...   200   1e-49
ref|XP_002298285.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49
ref|XP_002878256.1| pentatricopeptide repeat-containing protein ...   198   4e-49
ref|NP_974457.1| pentatricopeptide repeat-containing protein [Ar...   197   1e-48
ref|NP_191463.2| pentatricopeptide repeat-containing protein [Ar...   197   1e-48

>ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
           [Vitis vinifera] gi|302143502|emb|CBI22063.3| unnamed
           protein product [Vitis vinifera]
          Length = 548

 Score =  200 bits (508), Expect = 1e-49
 Identities = 95/121 (78%), Positives = 108/121 (89%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           GY PSVISHTALMEAYGKG QYNKAE++FRRM SSGPEPSA TYQ+ILK FVE +KF+EA
Sbjct: 170 GYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEA 229

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361
           E  FETLLDD+ SPLKPDQKMFHMMIYMY+K+GNY+KARK F  M +RG+PQST+T+NSL
Sbjct: 230 EETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSL 289

Query: 362 M 364
           M
Sbjct: 290 M 290



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/121 (26%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           G  P V+S+  L+ AYGK  +  +A A+F  M  +G  P+   Y I+L  F  +   ++A
Sbjct: 310 GLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 369

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361
            ++F+++  D+ +   PD   +  M+  Y  + + + A K F ++   G   + +T+ +L
Sbjct: 370 RTVFKSMRRDRCT---PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTL 426

Query: 362 M 364
           +
Sbjct: 427 I 427


>ref|XP_002298285.1| predicted protein [Populus trichocarpa] gi|222845543|gb|EEE83090.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  198 bits (504), Expect = 3e-49
 Identities = 93/121 (76%), Positives = 110/121 (90%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           GY P+V+SHTALMEAYG+GG+YN AEAIFRRMQ+SGPEPSA TYQIILKTFVE +KF+EA
Sbjct: 146 GYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEA 205

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361
           E +FETLL+ + SPL+PDQKMFHMMIYM KK+GNY+KARK FA M +RG+PQST+T+NSL
Sbjct: 206 EEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSL 265

Query: 362 M 364
           M
Sbjct: 266 M 266



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/121 (27%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           G  P V+S+  L++AYG+  +  +A A+F  M  +G  PS   Y I+L  F  +   E+A
Sbjct: 286 GLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQA 345

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361
             +F+++  D+ +   PD   +  M+  Y  + + + A   F ++   GL  + +T+ +L
Sbjct: 346 RVVFKSMRRDRCT---PDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGAL 402

Query: 362 M 364
           +
Sbjct: 403 I 403



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/105 (28%), Positives = 57/105 (54%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           G P S +++ +LM        Y +   I+ +MQ SG  P   +Y +++K +  A + EEA
Sbjct: 254 GVPQSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEA 310

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKM 316
            ++FE +LD   + ++P  K +++++  +  SG  ++AR  F  M
Sbjct: 311 LAVFEEMLD---AGVRPSHKAYNILLDAFAISGMVEQARVVFKSM 352


>ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324094|gb|EFH54515.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 582

 Score =  198 bits (503), Expect = 4e-49
 Identities = 94/121 (77%), Positives = 109/121 (90%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           G  P+VIS+TALME+YG+GG+ N AEAIFRRMQSSGPEPSA TYQIILKTFVE DKF+EA
Sbjct: 169 GSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEA 228

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361
           E +FETLLD+K SPLKPDQKM+HMMIYMYKK+GNYDKARK F+ M  +G+PQST+T+NSL
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSL 288

Query: 362 M 364
           M
Sbjct: 289 M 289



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/105 (28%), Positives = 58/105 (55%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           G P S +++ +LM        Y +   I+ +MQ SG +P   +Y +++K +  A + EEA
Sbjct: 277 GVPQSTVTYNSLMSFETN---YKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEA 333

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKM 316
            S+FE +LD   + ++P  K +++++  +  SG  ++A+  F  M
Sbjct: 334 LSVFEEMLD---AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375


>ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332646343|gb|AEE79864.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/121 (76%), Positives = 109/121 (90%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           G  P+VIS+TALME+YG+GG+ N AEAIFRRMQSSGPEPSA TYQIILKTFVE DKF+EA
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361
           E +FETLLD+K SPLKPDQKM+HMMIYMYKK+GNY+KARK F+ M  +G+PQST+T+NSL
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295

Query: 362 M 364
           M
Sbjct: 296 M 296


>ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g59040 gi|332646344|gb|AEE79865.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 583

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/121 (76%), Positives = 109/121 (90%)
 Frame = +2

Query: 2   GYPPSVISHTALMEAYGKGGQYNKAEAIFRRMQSSGPEPSAFTYQIILKTFVEADKFEEA 181
           G  P+VIS+TALME+YG+GG+ N AEAIFRRMQSSGPEPSA TYQIILKTFVE DKF+EA
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228

Query: 182 ESIFETLLDDKISPLKPDQKMFHMMIYMYKKSGNYDKARKTFAKMPDRGLPQSTITFNSL 361
           E +FETLLD+K SPLKPDQKM+HMMIYMYKK+GNY+KARK F+ M  +G+PQST+T+NSL
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288

Query: 362 M 364
           M
Sbjct: 289 M 289