BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019144
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ...   213   3e-53
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]   212   5e-53
dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis ...   205   8e-51
ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana...   205   8e-51
ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus...   204   1e-50

>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
           gi|296090242|emb|CBI40061.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  213 bits (542), Expect = 3e-53
 Identities = 108/151 (71%), Positives = 125/151 (82%)
 Frame = -1

Query: 705 ELSKMQTGRASAGLIDHIIVETGGAKMPLSRIAXXXXXXXXXXXVTPYDPNASKEIERAI 526
           ELSK++TGRASAG++DHIIVETGG KMPLSR+A           VTPYD +A K++E AI
Sbjct: 98  ELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAI 157

Query: 525 MSSPLGLNPQVDGQRLIVAIAPLTKEGIQAMCKVVTKSADDVKQSIRRARQKAFDIIKKA 346
           +SSPLGLNP+ DG+RLI  I PLTKE IQAMCKVV KS +DVKQSIRRARQKA D+IKKA
Sbjct: 158 VSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDMIKKA 217

Query: 345 ASSIPKDDVKRLEKEVDDLTKKYIKSAEDMC 253
            SS+PKD  KRLEKEVD+LTKK++KSAEDMC
Sbjct: 218 GSSLPKDVAKRLEKEVDELTKKFVKSAEDMC 248


>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score =  212 bits (540), Expect = 5e-53
 Identities = 108/151 (71%), Positives = 124/151 (82%)
 Frame = -1

Query: 705 ELSKMQTGRASAGLIDHIIVETGGAKMPLSRIAXXXXXXXXXXXVTPYDPNASKEIERAI 526
           ELSK++TGRASAG++DHIIVETGG KMPLSR+A           VTPYD +A K++E AI
Sbjct: 98  ELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAI 157

Query: 525 MSSPLGLNPQVDGQRLIVAIAPLTKEGIQAMCKVVTKSADDVKQSIRRARQKAFDIIKKA 346
           +SSPLGLNP+ DG+RLI  I PLTKE IQAMCKVV KS +DVKQSIRRARQKA D IKKA
Sbjct: 158 VSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDXIKKA 217

Query: 345 ASSIPKDDVKRLEKEVDDLTKKYIKSAEDMC 253
            SS+PKD  KRLEKEVD+LTKK++KSAEDMC
Sbjct: 218 GSSLPKDVAKRLEKEVDELTKKFVKSAEDMC 248


>dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  205 bits (521), Expect = 8e-51
 Identities = 99/151 (65%), Positives = 126/151 (83%)
 Frame = -1

Query: 705 ELSKMQTGRASAGLIDHIIVETGGAKMPLSRIAXXXXXXXXXXXVTPYDPNASKEIERAI 526
           +L+K++TGRA+ G++DHI+VETGG KMPL+ +A           V PYDP+  KE+E+AI
Sbjct: 107 DLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAI 166

Query: 525 MSSPLGLNPQVDGQRLIVAIAPLTKEGIQAMCKVVTKSADDVKQSIRRARQKAFDIIKKA 346
           ++SPLGLNP++DGQRL+ +I  LTKE IQAMCK+VTKS++ VKQSIRRARQKA D IKKA
Sbjct: 167 VASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKA 226

Query: 345 ASSIPKDDVKRLEKEVDDLTKKYIKSAEDMC 253
            SS+PKD+VKRLEKEVD+LTKK++KSAEDMC
Sbjct: 227 GSSLPKDEVKRLEKEVDELTKKFVKSAEDMC 257


>ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana]
           gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis
           thaliana] gi|51970776|dbj|BAD44080.1| putative ribosome
           recycling factor [Arabidopsis thaliana]
           gi|62319213|dbj|BAD94407.1| putative ribosome recycling
           factor [Arabidopsis thaliana]
           gi|332640195|gb|AEE73716.1| ribosome recycling factor
           [Arabidopsis thaliana]
          Length = 267

 Score =  205 bits (521), Expect = 8e-51
 Identities = 99/151 (65%), Positives = 126/151 (83%)
 Frame = -1

Query: 705 ELSKMQTGRASAGLIDHIIVETGGAKMPLSRIAXXXXXXXXXXXVTPYDPNASKEIERAI 526
           +L+K++TGRA+ G++DHI+VETGG KMPL+ +A           V PYDP+  KE+E+AI
Sbjct: 107 DLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAI 166

Query: 525 MSSPLGLNPQVDGQRLIVAIAPLTKEGIQAMCKVVTKSADDVKQSIRRARQKAFDIIKKA 346
           ++SPLGLNP++DGQRL+ +I  LTKE IQAMCK+VTKS++ VKQSIRRARQKA D IKKA
Sbjct: 167 VASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKA 226

Query: 345 ASSIPKDDVKRLEKEVDDLTKKYIKSAEDMC 253
            SS+PKD+VKRLEKEVD+LTKK++KSAEDMC
Sbjct: 227 GSSLPKDEVKRLEKEVDELTKKFVKSAEDMC 257


>ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
           gi|223549449|gb|EEF50937.1| ribosome recycling factor,
           putative [Ricinus communis]
          Length = 262

 Score =  204 bits (519), Expect = 1e-50
 Identities = 101/151 (66%), Positives = 124/151 (82%)
 Frame = -1

Query: 705 ELSKMQTGRASAGLIDHIIVETGGAKMPLSRIAXXXXXXXXXXXVTPYDPNASKEIERAI 526
           EL+K++TGRASAG++DHIIVET G KMPL+R+A           V PYDPN    +E+AI
Sbjct: 102 ELTKLRTGRASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYDPNMVSALEKAI 161

Query: 525 MSSPLGLNPQVDGQRLIVAIAPLTKEGIQAMCKVVTKSADDVKQSIRRARQKAFDIIKKA 346
           +SSPLGLNP+VDG+RLI +I PLTKE +QAMCKVV KS ++VKQS+RRARQKA D IKKA
Sbjct: 162 VSSPLGLNPRVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRARQKALDTIKKA 221

Query: 345 ASSIPKDDVKRLEKEVDDLTKKYIKSAEDMC 253
            S++ KDDVKRLEKEVD+LTKK++KSAED+C
Sbjct: 222 GSNLSKDDVKRLEKEVDELTKKFVKSAEDIC 252