BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019141
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...    74   6e-23
emb|CBI24149.3| unnamed protein product [Vitis vinifera]               74   6e-23
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-21
ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methy...    68   1e-20
ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...    66   2e-20

>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score = 74.3 bits (181), Expect(2) = 6e-23
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = +3

Query: 42  NIALNNLVPERISFLRKDATEFMKEVVSRQE*WDLVILVSPKLAPRRKVRPECIG 206
           NI LNNL P +ISFLR+DATEFMK+ V+R E WD+VIL  PKLAPRRKV     G
Sbjct: 372 NIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKLAPRRKVLQSASG 426



 Score = 59.3 bits (142), Expect(2) = 6e-23
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +2

Query: 182 KGASGMYRNLNSLAM*ITKRGGLLMTCSCSEARTQ 286
           + ASGMYRNLNSLAM +T+RGGLLMTCSCS A TQ
Sbjct: 422 QSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQ 456


>emb|CBI24149.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 74.3 bits (181), Expect(2) = 6e-23
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = +3

Query: 42  NIALNNLVPERISFLRKDATEFMKEVVSRQE*WDLVILVSPKLAPRRKVRPECIG 206
           NI LNNL P +ISFLR+DATEFMK+ V+R E WD+VIL  PKLAPRRKV     G
Sbjct: 252 NIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKLAPRRKVLQSASG 306



 Score = 59.3 bits (142), Expect(2) = 6e-23
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +2

Query: 182 KGASGMYRNLNSLAM*ITKRGGLLMTCSCSEARTQ 286
           + ASGMYRNLNSLAM +T+RGGLLMTCSCS A TQ
Sbjct: 302 QSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQ 336


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 69.3 bits (168), Expect(2) = 5e-21
 Identities = 35/55 (63%), Positives = 40/55 (72%)
 Frame = +3

Query: 42  NIALNNLVPERISFLRKDATEFMKEVVSRQE*WDLVILVSPKLAPRRKVRPECIG 206
           NI LNNL P RISFLR+DA +FMK  +SR E WD+VIL  PKLAPR+KV     G
Sbjct: 252 NIVLNNLDPGRISFLREDAIQFMKGALSRNESWDIVILDPPKLAPRKKVLQNASG 306



 Score = 57.8 bits (138), Expect(2) = 5e-21
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +2

Query: 182 KGASGMYRNLNSLAM*ITKRGGLLMTCSCSEARTQ 286
           + ASGMYRN+NS+A+ +TKRGGLLMTCSCS A TQ
Sbjct: 302 QNASGMYRNMNSMALRLTKRGGLLMTCSCSGAMTQ 336


>ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Brachypodium distachyon]
          Length = 448

 Score = 67.8 bits (164), Expect(2) = 1e-20
 Identities = 35/55 (63%), Positives = 39/55 (70%)
 Frame = +3

Query: 42  NIALNNLVPERISFLRKDATEFMKEVVSRQE*WDLVILVSPKLAPRRKVRPECIG 206
           NI LN L  ERISFL++DAT FMK  +SR E WDLVIL  PKLAPR+KV     G
Sbjct: 313 NILLNKLNAERISFLKEDATAFMKGAISRNEVWDLVILDPPKLAPRKKVLQSASG 367



 Score = 57.8 bits (138), Expect(2) = 1e-20
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 182 KGASGMYRNLNSLAM*ITKRGGLLMTCSCSEARTQ 286
           + ASGMYRNLN+LAM + KRGGLLMTCSCS A TQ
Sbjct: 363 QSASGMYRNLNALAMQVVKRGGLLMTCSCSGAMTQ 397


>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Glycine max]
          Length = 444

 Score = 65.9 bits (159), Expect(2) = 2e-20
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 42  NIALNNLVPERISFLRKDATEFMKEVVSRQE*WDLVILVSPKLAPRRKV 188
           N+ LNN+ P RISFLR+DATEFMK  + R E WD+VI+  PKLAP +KV
Sbjct: 309 NVVLNNIDPGRISFLREDATEFMKGALLRNESWDIVIIDPPKLAPTKKV 357



 Score = 59.3 bits (142), Expect(2) = 2e-20
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +2

Query: 188 ASGMYRNLNSLAM*ITKRGGLLMTCSCSEARTQ 286
           ASGMYRNLNSLAM +TKRGGLLMTCSCS A TQ
Sbjct: 361 ASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQ 393