BLASTX nr result

ID: Coptis21_contig00019131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019131
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273745.2| PREDICTED: uncharacterized protein LOC100255...   173   2e-41
emb|CAN76264.1| hypothetical protein VITISV_001854 [Vitis vinifera]   173   2e-41
ref|XP_004148171.1| PREDICTED: uncharacterized protein LOC101220...   168   5e-40
ref|XP_002520790.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
gb|ACU20834.1| unknown [Glycine max]                                  155   3e-36

>ref|XP_002273745.2| PREDICTED: uncharacterized protein LOC100255420 [Vitis vinifera]
           gi|297736551|emb|CBI25422.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  173 bits (438), Expect = 2e-41
 Identities = 81/120 (67%), Positives = 93/120 (77%), Gaps = 2/120 (1%)
 Frame = +3

Query: 18  MAIRDDYIKWVILITFLYRV--VTTNSVCELSVPHGDKLYNFSLASPTWKYPHGVLSEDG 191
           M I  D  +WV+++T L+RV   + + VC LSV     LY FSLASPT K+PHGVLSEDG
Sbjct: 1   MRIGGDLPRWVLILTILHRVSLFSASDVCRLSVLDRYNLYTFSLASPTSKFPHGVLSEDG 60

Query: 192 FYKIAGNGTVLWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANHLGGYYVCTT 371
           FYK+A N TVLWFQLCDGMIFNHDPP C DC DCGGPS CGM CSALVAN++ GY+VCTT
Sbjct: 61  FYKVAVNETVLWFQLCDGMIFNHDPPTCADCWDCGGPSRCGMDCSALVANNVKGYHVCTT 120


>emb|CAN76264.1| hypothetical protein VITISV_001854 [Vitis vinifera]
          Length = 297

 Score =  173 bits (438), Expect = 2e-41
 Identities = 81/120 (67%), Positives = 93/120 (77%), Gaps = 2/120 (1%)
 Frame = +3

Query: 18  MAIRDDYIKWVILITFLYRV--VTTNSVCELSVPHGDKLYNFSLASPTWKYPHGVLSEDG 191
           M I  D  +WV+++T L+RV   + + VC LSV     LY FSLASPT K+PHGVLSEDG
Sbjct: 1   MRIGGDLPRWVLILTILHRVSLFSASDVCRLSVLDRYNLYTFSLASPTSKFPHGVLSEDG 60

Query: 192 FYKIAGNGTVLWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANHLGGYYVCTT 371
           FYK+A N TVLWFQLCDGMIFNHDPP C DC DCGGPS CGM CSALVAN++ GY+VCTT
Sbjct: 61  FYKVAVNETVLWFQLCDGMIFNHDPPTCADCWDCGGPSRCGMDCSALVANNVKGYHVCTT 120


>ref|XP_004148171.1| PREDICTED: uncharacterized protein LOC101220308 [Cucumis sativus]
          Length = 281

 Score =  168 bits (425), Expect = 5e-40
 Identities = 76/122 (62%), Positives = 92/122 (75%), Gaps = 4/122 (3%)
 Frame = +3

Query: 18  MAIRDDYIKWV-ILITFLYRVVTTNS---VCELSVPHGDKLYNFSLASPTWKYPHGVLSE 185
           M  R  ++KWV      L++++  NS   +CE S+ +  K+YNF+LASPT K+PHGVLSE
Sbjct: 1   MMRRIHFVKWVTFFFVILHQILPFNSAFSICEYSLVNNGKMYNFNLASPTSKFPHGVLSE 60

Query: 186 DGFYKIAGNGTVLWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANHLGGYYVC 365
           DGFY++A N TV+WFQLCDGMIFNHDPP C DC  CGGPSHCGMGC ALVAN + GY VC
Sbjct: 61  DGFYRVAVNNTVVWFQLCDGMIFNHDPPMCIDCLGCGGPSHCGMGCGALVANKIEGYDVC 120

Query: 366 TT 371
           TT
Sbjct: 121 TT 122


>ref|XP_002520790.1| conserved hypothetical protein [Ricinus communis]
           gi|223539921|gb|EEF41499.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/110 (67%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
 Frame = +3

Query: 51  ILITFLYRVVTTNS---VCELSVPHGDKLYNFSLASPTWKYPHGVLSEDGFYKIAGNGTV 221
           + I  + R  + NS   VC+LS   G  LYNFSL SP  K+PHGVLSEDGFYK+A N +V
Sbjct: 15  VFIMIIIRAGSLNSASTVCQLSFVDGHSLYNFSLVSPLPKFPHGVLSEDGFYKVAANESV 74

Query: 222 LWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANHLGGYYVCTT 371
           LWFQLCDGMIFNHDPPRC DC DCGGPS CGM CSALVAN+  GY +CTT
Sbjct: 75  LWFQLCDGMIFNHDPPRCVDCLDCGGPSRCGMECSALVANNREGYDICTT 124


>gb|ACU20834.1| unknown [Glycine max]
          Length = 243

 Score =  155 bits (393), Expect = 3e-36
 Identities = 67/114 (58%), Positives = 86/114 (75%), Gaps = 7/114 (6%)
 Frame = +3

Query: 48  VILITFLYRVV-------TTNSVCELSVPHGDKLYNFSLASPTWKYPHGVLSEDGFYKIA 206
           +I++TF   ++       T  ++C+ S   G+ LYN++L+SP   +PHG+LSEDGFYK+A
Sbjct: 9   IIIVTFFTLLLLQHLTFATATALCQFSFLDGNTLYNYTLSSPIRNFPHGILSEDGFYKVA 68

Query: 207 GNGTVLWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANHLGGYYVCT 368
            N T LWFQLCDGMIFNHDPP C DC DCGGP HCGM C+ALVAN++GGY+VCT
Sbjct: 69  VNDTTLWFQLCDGMIFNHDPPICADCWDCGGPKHCGMKCNALVANNVGGYHVCT 122


Top