BLASTX nr result

ID: Coptis21_contig00019130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019130
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-...   261   2e-67
emb|CBI14986.3| unnamed protein product [Vitis vinifera]              254   2e-65
ref|XP_002511357.1| transcription factor, putative [Ricinus comm...   246   7e-63
ref|XP_003522392.1| PREDICTED: jmjC domain-containing protein 4-...   241   1e-61
ref|XP_003601228.1| JmjC domain-containing protein [Medicago tru...   234   2e-59

>ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-like [Vitis vinifera]
          Length = 493

 Score =  261 bits (666), Expect = 2e-67
 Identities = 130/247 (52%), Positives = 173/247 (70%), Gaps = 1/247 (0%)
 Frame = -1

Query: 880 RSMKNSVYDIFGDVSEAKFPGFKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHN 701
           R+MK+SVY+I  DV+EAKFPGFKKA+W+EC Q+Q EIIFVPSGWYHQVHNL+DTISINHN
Sbjct: 220 RNMKSSVYNICEDVNEAKFPGFKKAVWLECIQEQDEIIFVPSGWYHQVHNLEDTISINHN 279

Query: 700 WFNAHNLSWVWKLLHKDYKEAKEYIEDIRDICDNFEDLCQRNLAANTGMNXXXXXXXXXX 521
           WFNA+NLSWVW LL KDY EAKEYIED+RDICD+FE LCQRNLAANTGMN          
Sbjct: 280 WFNAYNLSWVWDLLLKDYNEAKEYIEDVRDICDDFEGLCQRNLAANTGMNFCDFFIFIAC 339

Query: 520 XXXXSLILLDLSDKVNHKPMKGTLFNTQHVLLNLIFIKQVALSMKSVEALNENTSSLLEV 341
               +L+ L    +VN  P        QH+ LNL+  +++ L MK+V+AL  + + LL++
Sbjct: 340 FSFANLVQLYHLHRVNENPSWCLFPKAQHLALNLLSAQKIVLKMKTVDALAGDHALLLDL 399

Query: 340 REVLKEPLFVELCKDLEKTYKMISEQWEQCSDTNEPSVN-FDELELDKAAFPRVCRPEDL 164
           R+++ +  F+ELC  L++TY+ I ++ +Q  D  E  ++   +L+    +  ++  PEDL
Sbjct: 400 RKMMDDSKFLELCSGLDRTYRGIHKEQQQNYDKKETLMDGLGDLDFIVKSCSQIYAPEDL 459

Query: 163 VRMIDFA 143
           V  ID A
Sbjct: 460 VSFIDSA 466


>emb|CBI14986.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  254 bits (649), Expect = 2e-65
 Identities = 127/242 (52%), Positives = 168/242 (69%), Gaps = 1/242 (0%)
 Frame = -1

Query: 865 SVYDIFGDVSEAKFPGFKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHNWFNAH 686
           SVY+I  DV+EAKFPGFKKA+W+EC Q+Q EIIFVPSGWYHQVHNL+DTISINHNWFNA+
Sbjct: 230 SVYNICEDVNEAKFPGFKKAVWLECIQEQDEIIFVPSGWYHQVHNLEDTISINHNWFNAY 289

Query: 685 NLSWVWKLLHKDYKEAKEYIEDIRDICDNFEDLCQRNLAANTGMNXXXXXXXXXXXXXXS 506
           NLSWVW LL KDY EAKEYIED+RDICD+FE LCQRNLAANTGMN              +
Sbjct: 290 NLSWVWDLLLKDYNEAKEYIEDVRDICDDFEGLCQRNLAANTGMNFCDFFIFIACFSFAN 349

Query: 505 LILLDLSDKVNHKPMKGTLFNTQHVLLNLIFIKQVALSMKSVEALNENTSSLLEVREVLK 326
           L+ L    +VN  P        QH+ LNL+  +++ L MK+V+AL  + + LL++R+++ 
Sbjct: 350 LVQLYHLHRVNENPSWCLFPKAQHLALNLLSAQKIVLKMKTVDALAGDHALLLDLRKMMD 409

Query: 325 EPLFVELCKDLEKTYKMISEQWEQCSDTNEPSVN-FDELELDKAAFPRVCRPEDLVRMID 149
           +  F+ELC  L++TY+ I ++ +Q  D  E  ++   +L+    +  ++  PEDLV  ID
Sbjct: 410 DSKFLELCSGLDRTYRGIHKEQQQNYDKKETLMDGLGDLDFIVKSCSQIYAPEDLVSFID 469

Query: 148 FA 143
            A
Sbjct: 470 SA 471


>ref|XP_002511357.1| transcription factor, putative [Ricinus communis]
           gi|223550472|gb|EEF51959.1| transcription factor,
           putative [Ricinus communis]
          Length = 462

 Score =  246 bits (627), Expect = 7e-63
 Identities = 124/254 (48%), Positives = 168/254 (66%), Gaps = 3/254 (1%)
 Frame = -1

Query: 880 RSMKNSVYDIFGDVSEAKFPGFKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHN 701
           R+MKN+VY+IF DVSE +FPGFKKAIW+EC Q+Q EIIFVPS WYHQVHNL+DTISINHN
Sbjct: 215 RNMKNTVYNIFEDVSETQFPGFKKAIWLECIQNQNEIIFVPSRWYHQVHNLEDTISINHN 274

Query: 700 WFNAHNLSWVWKLLHKDYKEAKEYIEDIRDICDNFEDLCQRNLAANTGMNXXXXXXXXXX 521
           WFNA+NLSWVW LL +DYKEAKEYIEDIRDICD+FE +CQRNLAANTGMN          
Sbjct: 275 WFNAYNLSWVWDLLWEDYKEAKEYIEDIRDICDDFEGVCQRNLAANTGMNFIDFFIFLAP 334

Query: 520 XXXXSLI---LLDLSDKVNHKPMKGTLFNTQHVLLNLIFIKQVALSMKSVEALNENTSSL 350
               +++     D   + +H+  K     T+H+  NL  I+++AL M+S E         
Sbjct: 335 FFLANVVQHYCRDRDSETSHRTSK----VTRHLAFNLASIQKIALKMRSTEGETGTGGYF 390

Query: 349 LEVREVLKEPLFVELCKDLEKTYKMISEQWEQCSDTNEPSVNFDELELDKAAFPRVCRPE 170
           L+++E++++P F++L  D+ + Y MI EQ  + +   E ++  D L+   +    +C  E
Sbjct: 391 LDLKEIVEDPKFLKLYMDMGRIYGMIHEQQSRTNRDIEKAMEDDILDYSFS----ICTLE 446

Query: 169 DLVRMIDFAFTHFG 128
           D V+ +D+     G
Sbjct: 447 DFVKFVDYTVRKLG 460


>ref|XP_003522392.1| PREDICTED: jmjC domain-containing protein 4-like [Glycine max]
          Length = 492

 Score =  241 bits (616), Expect = 1e-61
 Identities = 124/252 (49%), Positives = 165/252 (65%), Gaps = 1/252 (0%)
 Frame = -1

Query: 880 RSMKNSVYDIFGDVSEAKFPGFKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHN 701
           R+MKN VY+IF +VS +KFPGF +AIW+ECTQ+  EIIFVPSGWYHQVHNL+DTISINHN
Sbjct: 228 RNMKNCVYNIFDEVSNSKFPGFSEAIWLECTQNAGEIIFVPSGWYHQVHNLEDTISINHN 287

Query: 700 WFNAHNLSWVWKLLHKDYKEAKEYIEDIRDICDNFEDLCQRNLAANTGMNXXXXXXXXXX 521
           WFNA+NLSWVW LL +DY EAKEYIEDI+DICD+FE LCQRNLAANTGMN          
Sbjct: 288 WFNAYNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFISY 347

Query: 520 XXXXSLILLDLSDKVNHKPMKGTLFNTQHVLLNLIFIKQVALSMKSVEALNENTSSLLEV 341
               +L+LL   ++        +   +QH  +NL  ++++A  MKS+ AL  N   ++++
Sbjct: 348 FALANLVLLRYMNRRYGNGTGSSSTISQHFSMNLGCLRKIASEMKSMHALEGNHDYVVDM 407

Query: 340 REVLKEPLFVELCKDLEKTYKMISEQWEQCSDTNEPSV-NFDELELDKAAFPRVCRPEDL 164
            E  ++P F +LC  + +TY MI EQ     D    S+ +  +L   K+   ++  PEDL
Sbjct: 408 IEAFEDPRFSKLCMHVGRTYIMIQEQSYLSLDFECTSMCDLVDLNDMKSYTSQIYTPEDL 467

Query: 163 VRMIDFAFTHFG 128
           ++ ID      G
Sbjct: 468 IKFIDNGVAELG 479


>ref|XP_003601228.1| JmjC domain-containing protein [Medicago truncatula]
            gi|355490276|gb|AES71479.1| JmjC domain-containing
            protein [Medicago truncatula]
          Length = 525

 Score =  234 bits (598), Expect = 2e-59
 Identities = 128/262 (48%), Positives = 167/262 (63%), Gaps = 4/262 (1%)
 Frame = -1

Query: 871  KNSVYDIFGDVSEAKFPGFKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHNWFN 692
            K+ VY+IF +VS++KFPGF+KAIW+ECTQ+ +EIIFVPSGWYHQV+NL+DTISINHNWFN
Sbjct: 264  KSCVYNIFDEVSDSKFPGFEKAIWLECTQEAREIIFVPSGWYHQVYNLEDTISINHNWFN 323

Query: 691  AHNLSWVWKLLHKDYKEAKEYIEDIRDICDNFEDLCQRNLAANTGMNXXXXXXXXXXXXX 512
            A+NLSWVW LL  DY EAKEYIEDI+DICD+FE LCQRNLAANTGMN             
Sbjct: 324  AYNLSWVWNLLLSDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFFDFFTFIAYFAL 383

Query: 511  XSLILL-DLSDKVNHKPMKGTLFNTQHVL-LNLIFIKQVALSMKSVEALNENTSSLLEVR 338
             +L+LL  +  +V      G+L    H L LN+  I++VA  MK V AL      ++++ 
Sbjct: 384  ANLVLLCYIYGRVG--STTGSLSRVAHHLSLNIGSIRKVASDMKHVHALEGTRDCIVDMI 441

Query: 337  EVLKEPLFVELCKDLEKTYKMISEQWEQCSDTNEPSV--NFDELELDKAAFPRVCRPEDL 164
            +  ++P F + C  + KTY MI EQ    SD    S+    D   L      ++  PEDL
Sbjct: 442  KTFEDPRFSKFCMQVGKTYLMIHEQSNLSSDFESASLVDLVDLCVLKACTSSQIYTPEDL 501

Query: 163  VRMIDFAFTHFGVESGLEDSVV 98
            ++ ID      G +  +E SV+
Sbjct: 502  IKFIDNTIAELG-DINMESSVL 522


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