BLASTX nr result

ID: Coptis21_contig00019126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019126
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280034.2| PREDICTED: uncharacterized protein LOC100242...   262   1e-67
ref|XP_002308522.1| predicted protein [Populus trichocarpa] gi|2...   260   3e-67
dbj|BAK61878.1| YGGT family protein [Citrus unshiu]                   244   2e-62
ref|NP_001240890.1| uncharacterized protein LOC100791676 [Glycin...   243   7e-62
ref|XP_004144214.1| PREDICTED: uncharacterized protein LOC101210...   241   2e-61

>ref|XP_002280034.2| PREDICTED: uncharacterized protein LOC100242172 [Vitis vinifera]
           gi|296081720|emb|CBI20725.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  262 bits (669), Expect = 1e-67
 Identities = 146/248 (58%), Positives = 172/248 (69%), Gaps = 7/248 (2%)
 Frame = +2

Query: 65  EDATQKPNIPS-HFVSNC-LLSSAFLXXXXXXXXXXHAMK-PN----PDSFRDLHKSISS 223
           E +T++    + ++ +NC LLSSAFL            +  P     PD  R  H S++S
Sbjct: 7   ESSTERARCAAPNWAANCPLLSSAFLQTSFPPFLRPTKLTLPETSGVPDFIRQFHSSVAS 66

Query: 224 AVDQCFRTLNSIADKNPLLHKLFSLPDNLRNACQIRFRNHSTANSLSMHNFAAILPGDSV 403
           A  +C   L   A +NP L++L SL  +     QI  R     N LS  NFAAILPGDSV
Sbjct: 67  ATQRCVALLQLFASQNPFLNRLSSLSAHFS---QIHCRKQRNLNPLSNQNFAAILPGDSV 123

Query: 404 AGIVAANGVLNFLNIYNTLLIVRLVLTWFPNSPAAIVSPLSTICDPYLNIFRGIIPPLGG 583
           AGIV ANG+LNFLNIYNTLLIVRLVLTWFPNSP AIVSPLST+CDPYLNIFRGIIPPLGG
Sbjct: 124 AGIVVANGILNFLNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGG 183

Query: 584 TLDLSPILAFLVLNALTSTASALPAEMPVEGPSPQRSSSAPHLFNLTMAQKQWMKRVCGE 763
           TLDLSPILAFLVLNA TSTA+ALPAE+P+ G   Q  SS   LF+LT  QK+WM+R+CG 
Sbjct: 184 TLDLSPILAFLVLNAFTSTAAALPAELPMAGVPQQIPSSHTRLFDLTTTQKKWMRRLCGN 243

Query: 764 KSKNSPSV 787
           +SK+S SV
Sbjct: 244 RSKSSSSV 251


>ref|XP_002308522.1| predicted protein [Populus trichocarpa] gi|222854498|gb|EEE92045.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  260 bits (665), Expect = 3e-67
 Identities = 136/210 (64%), Positives = 164/210 (78%), Gaps = 4/210 (1%)
 Frame = +2

Query: 173 MKPNPDSFR-DLHKSISSAVDQCFRTLNSIADKNPLLHKLFSLPDN--LRNACQIRFRNH 343
           +K NP  F  +LH SI+SA D+C R L+S A +NP+L  + +  +    R  C+  +   
Sbjct: 44  IKQNPSIFMGELHNSITSAADKCLRFLHSFASRNPILKNIVTDFNQHMTRIQCRREYCRR 103

Query: 344 STANSLSMHNFAAILPGDSVAGIVAANGVLNFLNIYNTLLIVRLVLTWFPNSPAAIVSPL 523
           +  N LS HNFAA+LPGDSVAG+V ANG++NFLNIYNTLL+VRLVLTWFPNSP AIVSPL
Sbjct: 104 NMNNYLSNHNFAAVLPGDSVAGLVVANGIINFLNIYNTLLVVRLVLTWFPNSPPAIVSPL 163

Query: 524 STICDPYLNIFRGIIPPLGGTLDLSPILAFLVLNALTSTASALPAEMPVEGPSPQRSSSA 703
           ST+CDPYLNIFRGIIPPLGGTLDLSPILAFLVLNA TSTA+ALPAE+P  G SP RS S+
Sbjct: 164 STLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSTATALPAELPENGASP-RSRSS 222

Query: 704 PHLF-NLTMAQKQWMKRVCGEKSKNSPSVD 790
           P LF +LT AQK+WM+R+ G KS++SP  D
Sbjct: 223 PTLFTHLTTAQKKWMRRLNGNKSRSSPGAD 252


>dbj|BAK61878.1| YGGT family protein [Citrus unshiu]
          Length = 254

 Score =  244 bits (624), Expect = 2e-62
 Identities = 133/234 (56%), Positives = 162/234 (69%), Gaps = 11/234 (4%)
 Frame = +2

Query: 104 VSNC-LLSSAFLXXXXXXXXXXHAMKPN------PDSFRDLHKSISSAVDQCFRTLNSIA 262
           VS+C LLSSAF             +  N      P+  RDL  S+ S  D+  + LNS+A
Sbjct: 19  VSSCMLLSSAFSQTPFVQPFFKPLLARNTVPVASPNIIRDLQNSVISITDKVSKFLNSLA 78

Query: 263 DKNPLLHKLFSLPDNLRNAC-QIRFRNHSTANSLSMHNFAAILPGDSVAGIVAANGVLNF 439
             NPL+ K  SL     + C Q+R RN+   N L  HNFAA+LPGDSV G+V ANG+++F
Sbjct: 79  SHNPLIQKFLSLSAEFHSFCHQVRCRNNVKMNPLGNHNFAAVLPGDSVGGLVVANGIMSF 138

Query: 440 LNIYNTLLIVRLVLTWFPNSPAAIVSPLSTICDPYLNIFRGIIPPLGGTLDLSPILAFLV 619
           LNIYNTLLIVRLVLTWFPNSP AIVSPLST+CDPYLNIFRGIIPPLGGTLDLSPILAFLV
Sbjct: 139 LNIYNTLLIVRLVLTWFPNSPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 198

Query: 620 LNALTSTASALPAEMPVEGPSPQRS---SSAPHLFNLTMAQKQWMKRVCGEKSK 772
           LNA+TS A+ALP E+PV G + Q++   +S P   NLT  QK+W++R+   + K
Sbjct: 199 LNAITSAAAALPCELPVTGLASQQAASPASIPVSTNLTTPQKKWIRRLSNNRGK 252


>ref|NP_001240890.1| uncharacterized protein LOC100791676 [Glycine max]
           gi|255638926|gb|ACU19765.1| unknown [Glycine max]
          Length = 234

 Score =  243 bits (619), Expect = 7e-62
 Identities = 123/192 (64%), Positives = 145/192 (75%)
 Frame = +2

Query: 203 LHKSISSAVDQCFRTLNSIADKNPLLHKLFSLPDNLRNACQIRFRNHSTANSLSMHNFAA 382
           LH S ++A D  FR L+S+A  N  L+K+ SLP      C ++         +S HNFAA
Sbjct: 39  LHTSFTTAADNFFRFLHSLASHNSFLNKILSLPSEFHTLC-VQIGKQRNVRLVSGHNFAA 97

Query: 383 ILPGDSVAGIVAANGVLNFLNIYNTLLIVRLVLTWFPNSPAAIVSPLSTICDPYLNIFRG 562
           +LPGDSVAG+V ANGVLNFLNIYNTLLIVRLVLTWFPN+P +IVSPLSTICDPYLNIFRG
Sbjct: 98  VLPGDSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRG 157

Query: 563 IIPPLGGTLDLSPILAFLVLNALTSTASALPAEMPVEGPSPQRSSSAPHLFNLTMAQKQW 742
           +IPPLGGTLDLSPILAFLVLNA TSTASALPAE+PV   S Q  ++  H  NLT +QK+W
Sbjct: 158 LIPPLGGTLDLSPILAFLVLNAFTSTASALPAELPVTEQSKQGLAAPLHSTNLTTSQKKW 217

Query: 743 MKRVCGEKSKNS 778
           + R  G +S+ S
Sbjct: 218 LTRFQGNRSRTS 229


>ref|XP_004144214.1| PREDICTED: uncharacterized protein LOC101210772 [Cucumis sativus]
           gi|449489274|ref|XP_004158265.1| PREDICTED:
           uncharacterized protein LOC101228772 [Cucumis sativus]
          Length = 253

 Score =  241 bits (615), Expect = 2e-61
 Identities = 121/201 (60%), Positives = 147/201 (73%), Gaps = 1/201 (0%)
 Frame = +2

Query: 179 PNPDSFRDLHKSISSAVDQCFRTLNSIADKNPLLHKLFSLPDNL-RNACQIRFRNHSTAN 355
           P  +  R LH+S +S  + C R  +S+A +NP LHKL SLP    R   QI   N     
Sbjct: 49  PPCNFLRHLHESFASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFR 108

Query: 356 SLSMHNFAAILPGDSVAGIVAANGVLNFLNIYNTLLIVRLVLTWFPNSPAAIVSPLSTIC 535
           +LS HNFAA+LPGDS+AG+V ANG+ NFL++YNTLL+VRLVLTWFPN+P AIVSPLST+C
Sbjct: 109 ALSSHNFAAVLPGDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLC 168

Query: 536 DPYLNIFRGIIPPLGGTLDLSPILAFLVLNALTSTASALPAEMPVEGPSPQRSSSAPHLF 715
           DPYLNIFRGIIPPLGGTLDLSPILAFLVLNA TSTA+ALPAE+P    S    +      
Sbjct: 169 DPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSV 228

Query: 716 NLTMAQKQWMKRVCGEKSKNS 778
           +LT +QK+WMKR+ G +  N+
Sbjct: 229 DLTSSQKKWMKRLQGSEKNNA 249


Top