BLASTX nr result

ID: Coptis21_contig00019118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019118
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240227.1| uncharacterized protein LOC100791663 [Glycin...    50   8e-07
ref|XP_003531263.1| PREDICTED: auxin-induced protein 5NG4-like [...    50   8e-07
gb|ACU13931.1| unknown [Glycine max]                                   50   8e-07
ref|XP_003546041.1| PREDICTED: auxin-induced protein 5NG4-like [...    50   1e-06
ref|XP_003541692.1| PREDICTED: auxin-induced protein 5NG4-like [...    50   1e-06

>ref|NP_001240227.1| uncharacterized protein LOC100791663 [Glycine max]
           gi|255635141|gb|ACU17927.1| unknown [Glycine max]
          Length = 357

 Score = 50.1 bits (118), Expect(2) = 8e-07
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +1

Query: 46  MKFCKGWEPVFVMVVIDVLYAFVQLLLKKVLDEGMDHLVLI 168
           MK C  W+P  VM+ ID     V +LLKKVL EGM+HLV I
Sbjct: 1   MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFI 41



 Score = 27.7 bits (60), Expect(2) = 8e-07
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +3

Query: 171 YRTSSAAILLAPIAYIWERN 230
           YR S A I LAPI Y  ERN
Sbjct: 43  YRLSVATIFLAPIGYFKERN 62


>ref|XP_003531263.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 351

 Score = 50.1 bits (118), Expect(2) = 8e-07
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +1

Query: 46  MKFCKGWEPVFVMVVIDVLYAFVQLLLKKVLDEGMDHLVLI 168
           MK C  W+P  VM+ ID     V +LLKKVL EGM+HLV I
Sbjct: 1   MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFI 41



 Score = 27.7 bits (60), Expect(2) = 8e-07
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +3

Query: 171 YRTSSAAILLAPIAYIWERN 230
           YR S A I LAPI Y  ERN
Sbjct: 43  YRLSVATIFLAPIGYFKERN 62


>gb|ACU13931.1| unknown [Glycine max]
          Length = 227

 Score = 50.1 bits (118), Expect(2) = 8e-07
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +1

Query: 46  MKFCKGWEPVFVMVVIDVLYAFVQLLLKKVLDEGMDHLVLI 168
           MK C  W+P  VM+ ID     V +LLKKVL EGM+HLV I
Sbjct: 1   MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFI 41



 Score = 27.7 bits (60), Expect(2) = 8e-07
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +3

Query: 171 YRTSSAAILLAPIAYIWERN 230
           YR S A I LAPI Y  ERN
Sbjct: 43  YRLSVATIFLAPIGYFKERN 62


>ref|XP_003546041.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 374

 Score = 50.4 bits (119), Expect(2) = 1e-06
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = +1

Query: 55  CKGWEPVFVMVVIDVLYAFVQLLLKKVLDEGMDHLVLI 168
           C  W+P  VM+ ID  +A V +LLKKVL+EGM+HLV I
Sbjct: 5   CDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFI 42



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 171 YRTSSAAILLAPIAYIWERN 230
           YR S A I +API Y  ERN
Sbjct: 44  YRLSIATIFIAPIGYFRERN 63


>ref|XP_003541692.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 374

 Score = 50.4 bits (119), Expect(2) = 1e-06
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = +1

Query: 55  CKGWEPVFVMVVIDVLYAFVQLLLKKVLDEGMDHLVLI 168
           C  W+P  VM+ ID  +A V +LLKKVL+EGM+HLV I
Sbjct: 5   CDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFI 42



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 171 YRTSSAAILLAPIAYIWERN 230
           YR S A I +API Y  ERN
Sbjct: 44  YRLSIATIFIAPICYFRERN 63


Top