BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019113
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]                377   e-102
ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223...   370   e-100
emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]                367   5e-99
ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]         365   1e-98
emb|CBI19236.3| unnamed protein product [Vitis vinifera]              365   2e-98

>gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
          Length = 353

 Score =  377 bits (968), Expect = e-102
 Identities = 209/355 (58%), Positives = 251/355 (70%), Gaps = 5/355 (1%)
 Frame = +1

Query: 100  SLLCPENSNVCFDDEIGNGFLEEQ----WNHQKLDKKINFFHSGDYFFQLGNLPLQSEEC 267
            +LLC E++N  FDD        E+    W+H    +  N    GD     G LP+QS+EC
Sbjct: 11   NLLCAEDNNSIFDDNDHYDATVEEFEATWHHGN-HQICNQNGGGDG----GCLPMQSDEC 65

Query: 268  MSLMVEKECDFLPRSDYLKRLQNGDLDLMVRKDALDWMKKVHSYYSFGPLTAYLSISYFD 447
            + LMVEKEC  LP  DYLKRL+NGDLD+  RK+A+DW+ KVH+++ FGPL AYLSI+Y D
Sbjct: 66   LVLMVEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKVHAHFGFGPLCAYLSINYLD 125

Query: 448  RFLSNYELPSGRAWVVQLLAVACLSLAAKMEEAVMPLSLDLQVGEPRFVFEARTIQRMEL 627
            RFLS YELP+G+ W++QLLAVACLSLAAKMEE  +PLSLDLQVGE RFVFEARTIQRMEL
Sbjct: 126  RFLSAYELPNGKPWMMQLLAVACLSLAAKMEETEVPLSLDLQVGESRFVFEARTIQRMEL 185

Query: 628  VVLSTLKWRMQAVTPFSFIDYFLHKINDDR-PPLKLFISQSAELTLCLANGIEFLEYKPS 804
            +VLSTL WRMQA+TPFSFIDYFL KIN+D+ PP K  I QS  L L    GI FLE++PS
Sbjct: 186  LVLSTLSWRMQAITPFSFIDYFLSKINNDQTPPPKSLILQSIHLILSTIRGIYFLEFRPS 245

Query: 805  EVAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLIQGFSPISGSVYVACAFHP 984
            E+AAAV ++V+GE++ V+ ++A+S   Q VQKERVLKCL+LI   S   GSV    A   
Sbjct: 246  EIAAAVAIAVVGETKTVDAEQAISVLAQPVQKERVLKCLQLIHDLSLFGGSVKGTSASLL 305

Query: 985  STPQSPIGVLDASCLSYKSEELTAGSGPISSCACPDAKRRKLNDTSELDLKSCEA 1149
            S PQSPIGVLDA+CLSY S   T      SS   PDAKRRKL+       K CEA
Sbjct: 306  SVPQSPIGVLDAACLSYSSNHTTVEPCANSSHNTPDAKRRKLD-------KPCEA 353


>ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223547100|gb|EEF48597.1|
            cyclin d, putative [Ricinus communis]
          Length = 354

 Score =  370 bits (950), Expect = e-100
 Identities = 197/346 (56%), Positives = 253/346 (73%), Gaps = 8/346 (2%)
 Frame = +1

Query: 100  SLLCPENSNVCFDDEIGNGF--------LEEQWNHQKLDKKINFFHSGDYFFQLGNLPLQ 255
            SLLC E++   FDD+    +         E  W+H   + +IN    G   F + +LP+ 
Sbjct: 11   SLLCAEDNISIFDDDNNKDYCYGDVVDEFEGSWHHG--NHRINHQDRG---FDV-SLPML 64

Query: 256  SEECMSLMVEKECDFLPRSDYLKRLQNGDLDLMVRKDALDWMKKVHSYYSFGPLTAYLSI 435
            SEEC+ LMVEKEC  LP +DYLKRL+ G+LDL  RK+A+DW+ KVH+++ FGPL+AYLSI
Sbjct: 65   SEECLRLMVEKECQHLPNADYLKRLRRGELDLGARKEAIDWIGKVHAHFGFGPLSAYLSI 124

Query: 436  SYFDRFLSNYELPSGRAWVVQLLAVACLSLAAKMEEAVMPLSLDLQVGEPRFVFEARTIQ 615
            +Y DRFLS YELP G+ W++QLLAVACLS+AAKMEE  +P+ LDLQVGE RFVFEARTIQ
Sbjct: 125  NYLDRFLSAYELPKGKDWMMQLLAVACLSIAAKMEETEVPIFLDLQVGESRFVFEARTIQ 184

Query: 616  RMELVVLSTLKWRMQAVTPFSFIDYFLHKINDDRPPLKLFISQSAELTLCLANGIEFLEY 795
            RMEL+VLSTL WRM+A+TPFSFID FL+KIN+D  P    I QS +L L +  GI+FLE+
Sbjct: 185  RMELLVLSTLSWRMKAITPFSFIDDFLNKINNDENPPTSLILQSIQLILSIIKGIDFLEF 244

Query: 796  KPSEVAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLIQGFSPISGSVYVACA 975
            +PSEVAAAVT++V+GE + V+ ++A+    Q +QKE+VLKC +LIQ FS I G++     
Sbjct: 245  RPSEVAAAVTIAVVGEIRTVDAEQAIFVLSQHIQKEKVLKCFQLIQDFSLIGGAIKDTNV 304

Query: 976  FHPSTPQSPIGVLDASCLSYKSEELTAGSGPISSCACPDAKRRKLN 1113
               S PQSPIGVLDA+CLSY+S+E T GS   SS   P+AKR+KLN
Sbjct: 305  RILSVPQSPIGVLDAACLSYRSDESTVGSCANSSQDTPEAKRKKLN 350


>emb|CAN88854.1| D2/4-type cyclin [Populus trichocarpa]
          Length = 361

 Score =  367 bits (941), Expect = 5e-99
 Identities = 205/355 (57%), Positives = 247/355 (69%), Gaps = 17/355 (4%)
 Frame = +1

Query: 100  SLLCPENSNVCFDDEIGNGFLEEQ----WNHQKLDKKINFFHSGDYFFQLGNLPLQSEEC 267
            +LLC E++N  FDD        E+    W+H    +  N    GD     G LP+QS+EC
Sbjct: 11   NLLCAEDNNSIFDDNDHYDATVEEFEATWHHGN-HQICNQNGGGDG----GCLPMQSDEC 65

Query: 268  MSLMVEKECDFLPRSDYLKRLQNGDLDLMVRKDALDWMKK------------VHSYYSFG 411
            + LMVEKEC  LP  DYLKRL+NGDLD+  RK+A+DW+ K            VH+++ FG
Sbjct: 66   LVLMVEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKAGSFFFLFFFTIVHAHFGFG 125

Query: 412  PLTAYLSISYFDRFLSNYELPSGRAWVVQLLAVACLSLAAKMEEAVMPLSLDLQVGEPRF 591
            PL AYLSI+Y DRFLS YELP+G+ W++QLLAVACLSLAAKMEE  +PLSLDLQVGE RF
Sbjct: 126  PLCAYLSINYLDRFLSAYELPNGKPWMMQLLAVACLSLAAKMEETEVPLSLDLQVGESRF 185

Query: 592  VFEARTIQRMELVVLSTLKWRMQAVTPFSFIDYFLHKINDDR-PPLKLFISQSAELTLCL 768
            VFEARTIQRMEL+VLSTL WRMQA+TPFSFIDYFL KIN+D+ PP K  I QS  L L  
Sbjct: 186  VFEARTIQRMELLVLSTLSWRMQAITPFSFIDYFLSKINNDQTPPPKSLILQSIHLILST 245

Query: 769  ANGIEFLEYKPSEVAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLIQGFSPI 948
              GI FLE++PSE+AAAV ++V+GE++ V+ ++A+S   Q VQKERVLKCL+LI   S  
Sbjct: 246  IRGIYFLEFRPSEIAAAVAIAVVGETKTVDAEQAISVLAQPVQKERVLKCLQLIHDLSLF 305

Query: 949  SGSVYVACAFHPSTPQSPIGVLDASCLSYKSEELTAGSGPISSCACPDAKRRKLN 1113
             GSV    A   S PQSPIGVLDA+CLSY S   T      SS   PDAKRRKL+
Sbjct: 306  GGSVKGTSASLLSVPQSPIGVLDAACLSYSSNHTTVEPCANSSHNTPDAKRRKLD 360


>ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 355

 Score =  365 bits (938), Expect = 1e-98
 Identities = 193/346 (55%), Positives = 248/346 (71%), Gaps = 6/346 (1%)
 Frame = +1

Query: 100  SLLCPENSNVCFDDEIGNGF--LEEQWNHQKLDKKINFFHSGDYFFQLGNLPLQSEECMS 273
            SLLC E++++  +++ G     LE+ W   +  +  N   S +     G  PLQS+EC+ 
Sbjct: 10   SLLCAEDNSIFDENDYGGSVEVLEDAWQDPRYRR--NLSQSENLDVPNGFFPLQSDECLR 67

Query: 274  LMVEKECDFLPRSDYLKRLQNGDLDLMVRKDALDWMKKVHSYYSFGPLTAYLSISYFDRF 453
            LMVEKE D LP  DY+ RL++GDLD   RK+A+DW++KV  ++ FGPL AYLSI+Y DRF
Sbjct: 68   LMVEKEWDHLPNGDYVNRLRSGDLDFGARKEAIDWIEKVQQHFGFGPLCAYLSINYLDRF 127

Query: 454  LSNYELPSGRAWVVQLLAVACLSLAAKMEEAVMPLSLDLQVGEPRFVFEARTIQRMELVV 633
            LS YELP  RAW +QLLAV CLSLAAKMEE  +P SLDLQVGE +++FEA+TIQRMEL+V
Sbjct: 128  LSAYELPKHRAWTMQLLAVGCLSLAAKMEETDVPFSLDLQVGESKYIFEAKTIQRMELLV 187

Query: 634  LSTLKWRMQAVTPFSFIDYFLHKINDDRPPLKLFISQSAELTLCLANGIEFLEYKPSEVA 813
            LSTL+WRMQA+TPFSFID+FL+KINDD+ P+   I QS +L L    GI+FLE++PSE+A
Sbjct: 188  LSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSEIA 247

Query: 814  AAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLIQGFSPISGSV---YVACAFHP 984
            AAV +SV+GE Q V+ +KA+S  IQLV+KERVLKC+K+IQ  +  SG       A    P
Sbjct: 248  AAVAISVVGEGQTVHTEKAISVLIQLVEKERVLKCVKMIQELASNSGGSAKGASASVSVP 307

Query: 985  STPQSPIGVLDASCLSYKSEELTAGSGPISS-CACPDAKRRKLNDT 1119
            S P+SP+GVL  +C SYKS++  A S   SS    PDAKRRKLN T
Sbjct: 308  SVPESPLGVLVTACFSYKSDDTNAASYANSSHNISPDAKRRKLNKT 353


>emb|CBI19236.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  365 bits (937), Expect = 2e-98
 Identities = 194/352 (55%), Positives = 251/352 (71%), Gaps = 7/352 (1%)
 Frame = +1

Query: 100  SLLCPENSNVCFDDEIGNGFLEE---QWNHQ--KLDKKINFFHSGDYFFQLGNLPLQSEE 264
            SLLC E+++  FDD       EE    W+HQ  +   +   F+ G++      LP+QS+E
Sbjct: 11   SLLCGEDNSSIFDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEFLI---GLPVQSDE 67

Query: 265  CMSLMVEKECDFLPRSDYLKRLQNGDLDLMVRKDALDWMKKVHSYYSFGPLTAYLSISYF 444
            C++LM+EKE   LP +DYL RL++GDLD+  R+D + W+ K H+++ FGPL AYL+I+Y 
Sbjct: 68   CLALMIEKESQHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFGPLCAYLAINYL 127

Query: 445  DRFLSNYELPSGRAWVVQLLAVACLSLAAKMEEAVMPLSLDLQVGEPRFVFEARTIQRME 624
            DRFLS YELP G+AW+ QLLAVACLSLAAKMEE  +PL LDLQV E RFVFEARTIQRME
Sbjct: 128  DRFLSTYELPKGKAWMAQLLAVACLSLAAKMEENEVPLCLDLQVAESRFVFEARTIQRME 187

Query: 625  LVVLSTLKWRMQAVTPFSFIDYFLHKINDDRPPLKLFISQSAELTLCLANGIEFLEYKPS 804
            L+VL TLKWRMQAVTPFSF+DYFL +INDD  P +  I  S +L L    GI+FLE++PS
Sbjct: 188  LLVLRTLKWRMQAVTPFSFVDYFLRRINDDEFPARTSILLSIQLILSTVKGIDFLEFRPS 247

Query: 805  EVAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLIQGFSPISGSV--YVACAF 978
            E+AAAV +S+ GE+Q V+ +KA+S  I+ ++KERVLKC++L+   S ISGSV      A 
Sbjct: 248  EIAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELMHDLSLISGSVKRSSTAAS 307

Query: 979  HPSTPQSPIGVLDASCLSYKSEELTAGSGPISSCACPDAKRRKLNDTSELDL 1134
             PS P +PIGVLDA+CLSYKS++ T GS   SS      K+RKLN   E++L
Sbjct: 308  VPSVPHTPIGVLDAACLSYKSDDTTVGSCANSS----HNKKRKLNAPPEVEL 355