BLASTX nr result

ID: Coptis21_contig00019112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019112
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262758.1| PREDICTED: uncharacterized protein LOC100257...   152   4e-35
emb|CAN83078.1| hypothetical protein VITISV_035882 [Vitis vinifera]   152   4e-35
ref|XP_002324934.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_003603272.1| hypothetical protein MTR_3g105780 [Medicago ...   135   5e-30
ref|XP_004157133.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   132   4e-29

>ref|XP_002262758.1| PREDICTED: uncharacterized protein LOC100257058 isoform 1 [Vitis
           vinifera]
          Length = 305

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/96 (71%), Positives = 85/96 (88%)
 Frame = -3

Query: 288 EEKVNWREEAINGGSLKHVDLLTGTNGWASPPGDLFTLRSKNFFTKNKQKSPSGDWLLKP 109
           ++  +WREEAINGGSL+HVDL  G+NGWASPPGDLF+LRSKN+FT+ KQKSPSGDWLLKP
Sbjct: 18  KQSSDWREEAINGGSLRHVDLHHGSNGWASPPGDLFSLRSKNYFTR-KQKSPSGDWLLKP 76

Query: 108 AGVDWLRSVNKLDNILARPDNRIQNSLNKARKLGKN 1
           AG DWLRS +KLDN+LARPDNR+ ++L KA+ L ++
Sbjct: 77  AGFDWLRSTSKLDNVLARPDNRVAHALRKAQSLNRS 112


>emb|CAN83078.1| hypothetical protein VITISV_035882 [Vitis vinifera]
          Length = 305

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/96 (71%), Positives = 85/96 (88%)
 Frame = -3

Query: 288 EEKVNWREEAINGGSLKHVDLLTGTNGWASPPGDLFTLRSKNFFTKNKQKSPSGDWLLKP 109
           ++  +WREEAINGGSL+HVDL  G+NGWASPPGDLF+LRSKN+FT+ KQKSPSGDWLLKP
Sbjct: 18  KQSSDWREEAINGGSLRHVDLHHGSNGWASPPGDLFSLRSKNYFTR-KQKSPSGDWLLKP 76

Query: 108 AGVDWLRSVNKLDNILARPDNRIQNSLNKARKLGKN 1
           AG DWLRS +KLDN+LARPDNR+ ++L KA+ L ++
Sbjct: 77  AGFDWLRSTSKLDNVLARPDNRVAHALRKAQSLNRS 112


>ref|XP_002324934.1| predicted protein [Populus trichocarpa] gi|222866368|gb|EEF03499.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/91 (71%), Positives = 77/91 (84%)
 Frame = -3

Query: 273 WREEAINGGSLKHVDLLTGTNGWASPPGDLFTLRSKNFFTKNKQKSPSGDWLLKPAGVDW 94
           W  E+INGGSL+HVDL TG NGWASPPGDLF+LRSKN+F K KQKSPSGD+LL PAG+DW
Sbjct: 26  WITESINGGSLRHVDLHTGVNGWASPPGDLFSLRSKNYFIK-KQKSPSGDYLLSPAGMDW 84

Query: 93  LRSVNKLDNILARPDNRIQNSLNKARKLGKN 1
           L+S  KLDN+LARPDNR+ N+L KA+   K+
Sbjct: 85  LKSSTKLDNVLARPDNRVANALKKAQSQNKS 115


>ref|XP_003603272.1| hypothetical protein MTR_3g105780 [Medicago truncatula]
           gi|355492320|gb|AES73523.1| hypothetical protein
           MTR_3g105780 [Medicago truncatula]
           gi|388499372|gb|AFK37752.1| unknown [Medicago
           truncatula]
          Length = 291

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/92 (67%), Positives = 78/92 (84%)
 Frame = -3

Query: 276 NWREEAINGGSLKHVDLLTGTNGWASPPGDLFTLRSKNFFTKNKQKSPSGDWLLKPAGVD 97
           +W  EAINGGSL+HVDL TGTNGWASPPGD+F+LRS+++FTK KQKSP+GD+LL P G+D
Sbjct: 20  DWTTEAINGGSLRHVDLNTGTNGWASPPGDVFSLRSQSYFTK-KQKSPAGDYLLSPIGMD 78

Query: 96  WLRSVNKLDNILARPDNRIQNSLNKARKLGKN 1
           WL+S  KLDN+L R DNR+ N+L KA+  GK+
Sbjct: 79  WLKSSTKLDNVLNRSDNRVANALKKAQSNGKS 110


>ref|XP_004157133.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229067 [Cucumis sativus]
          Length = 283

 Score =  132 bits (331), Expect = 4e-29
 Identities = 59/92 (64%), Positives = 78/92 (84%)
 Frame = -3

Query: 276 NWREEAINGGSLKHVDLLTGTNGWASPPGDLFTLRSKNFFTKNKQKSPSGDWLLKPAGVD 97
           +W  E+INGGSL+HVDL TGTNGWASPPGDLF +RS N+FTK +QK P+GD+LL PAG+D
Sbjct: 17  DWISESINGGSLRHVDLQTGTNGWASPPGDLFCIRSTNYFTK-RQKCPAGDYLLFPAGMD 75

Query: 96  WLRSVNKLDNILARPDNRIQNSLNKARKLGKN 1
           WL+S +KL+N++AR DNR+ +SL +A+  GK+
Sbjct: 76  WLKSTSKLENVMAREDNRVSSSLRRAQSEGKS 107


Top