BLASTX nr result

ID: Coptis21_contig00019111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019111
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264489.1| PREDICTED: uncharacterized protein LOC100248...   167   1e-39
gb|ABK94626.1| unknown [Populus trichocarpa]                          166   2e-39
gb|ABK96481.1| unknown [Populus trichocarpa x Populus deltoides]      164   7e-39
ref|XP_002319758.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
gb|AAM67126.1| unknown [Arabidopsis thaliana]                         162   3e-38

>ref|XP_002264489.1| PREDICTED: uncharacterized protein LOC100248442 [Vitis vinifera]
           gi|296088754|emb|CBI38204.3| unnamed protein product
           [Vitis vinifera]
          Length = 130

 Score =  167 bits (423), Expect = 1e-39
 Identities = 78/112 (69%), Positives = 90/112 (80%)
 Frame = -2

Query: 509 LTFILLCLLFHTAFAKTKSPRPISDTEVREKKNNCYADIQSGLWGRECKYSKIATENCAL 330
           L  + + L F  +   +KS RPISD+E+REKKN CYADI+SGLWG +CK S IA ENC L
Sbjct: 19  LLLLAVLLSFAPSPVLSKSRRPISDSEIREKKNECYADIESGLWGWQCKSSVIAKENCVL 78

Query: 329 NCLSPVCYTLVYESDPLEEGERDHVRSQEYKYCMHRVSMGESLEGVKGSFDY 174
            CLSP CY LVYESDPLEEGE+D  RSQEYKYCMHR+S+GESL+GVKGSFDY
Sbjct: 79  QCLSPPCYELVYESDPLEEGEKDFTRSQEYKYCMHRLSLGESLDGVKGSFDY 130


>gb|ABK94626.1| unknown [Populus trichocarpa]
          Length = 129

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/126 (64%), Positives = 98/126 (77%), Gaps = 2/126 (1%)
 Frame = -2

Query: 548 Y*KIEKKERSMAKLTFI-LLCLLF-HTAFAKTKSPRPISDTEVREKKNNCYADIQSGLWG 375
           Y   + K R  + LTF  LL LLF + +   +KSPRPI+D EVR+ KN CYADI+SGLWG
Sbjct: 3   YYYFDDKSRLNSFLTFFFLLVLLFINPSSVLSKSPRPITDVEVRQIKNECYADIESGLWG 62

Query: 374 RECKYSKIATENCALNCLSPVCYTLVYESDPLEEGERDHVRSQEYKYCMHRVSMGESLEG 195
           ++CK S  A ENCAL CLSP+CY L+YESDPLEEGE+D  RSQEYKYCM++ SMGESLEG
Sbjct: 63  QQCKTSMTAKENCALKCLSPICYELIYESDPLEEGEKDFTRSQEYKYCMYKKSMGESLEG 122

Query: 194 VKGSFD 177
           +KG+FD
Sbjct: 123 IKGAFD 128


>gb|ABK96481.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 129

 Score =  164 bits (416), Expect = 7e-39
 Identities = 80/126 (63%), Positives = 98/126 (77%), Gaps = 2/126 (1%)
 Frame = -2

Query: 548 Y*KIEKKERSMAKLTFI-LLCLLF-HTAFAKTKSPRPISDTEVREKKNNCYADIQSGLWG 375
           Y   + K R  + LTF  LL LLF + +   +KSPRPI+D EVR+ KN CYADI+SGLWG
Sbjct: 3   YYYFDDKSRLNSFLTFFFLLVLLFINPSSVLSKSPRPITDVEVRQIKNECYADIESGLWG 62

Query: 374 RECKYSKIATENCALNCLSPVCYTLVYESDPLEEGERDHVRSQEYKYCMHRVSMGESLEG 195
           ++CK S  A ENCAL CLSP+CY L+YESDPLEEGE+D  RSQEYKYCM++ S+GESLEG
Sbjct: 63  QQCKTSMTAKENCALKCLSPICYELIYESDPLEEGEKDFTRSQEYKYCMYKKSVGESLEG 122

Query: 194 VKGSFD 177
           +KG+FD
Sbjct: 123 IKGAFD 128


>ref|XP_002319758.1| predicted protein [Populus trichocarpa] gi|222858134|gb|EEE95681.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  163 bits (412), Expect = 2e-38
 Identities = 72/108 (66%), Positives = 89/108 (82%)
 Frame = -2

Query: 503 FILLCLLFHTAFAKTKSPRPISDTEVREKKNNCYADIQSGLWGRECKYSKIATENCALNC 324
           F+L+ L  + +   +KSPRPI+D EVR+ KN CYADI+SGLWG++CK S  A ENCAL C
Sbjct: 8   FLLVLLFINPSSVLSKSPRPITDVEVRQIKNECYADIESGLWGQQCKTSMTAKENCALKC 67

Query: 323 LSPVCYTLVYESDPLEEGERDHVRSQEYKYCMHRVSMGESLEGVKGSF 180
           LSP+CY L+YESDPLEEGE+D  RSQEYKYCM++ SMGESLEG+KG+F
Sbjct: 68  LSPICYELIYESDPLEEGEKDFTRSQEYKYCMYKKSMGESLEGIKGAF 115


>gb|AAM67126.1| unknown [Arabidopsis thaliana]
          Length = 121

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/120 (64%), Positives = 94/120 (78%), Gaps = 4/120 (3%)
 Frame = -2

Query: 527 ERSMAKLTFILLCLLFHTAF----AKTKSPRPISDTEVREKKNNCYADIQSGLWGRECKY 360
           E S A+ +F+ L LL  + F      +KSPRPISD E+R+KK+ CY DI+SGLWG +CK 
Sbjct: 2   EISQARSSFVCLLLLLLSMFFVPCVFSKSPRPISDVEIRQKKSECYGDIESGLWGWQCKS 61

Query: 359 SKIATENCALNCLSPVCYTLVYESDPLEEGERDHVRSQEYKYCMHRVSMGESLEGVKGSF 180
           S IA ENCAL CLSPVCY L+YESDPLEEGE+D +RSQEYKYCM++ S+GESLEGV+G F
Sbjct: 62  SAIAKENCALRCLSPVCYQLIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGIF 121


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