BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019107
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    95   1e-17
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    82   1e-13
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    79   8e-13

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 58/192 (30%), Positives = 104/192 (54%), Gaps = 2/192 (1%)
 Frame = -2

Query: 682  FLPHGFSNHSPILIEWNAQSRNTS-PFRFKNYWVEQPEFHIILEEV*KTKIFTNPMYILM 506
            FLP G S+HSP++++     +N   PFRF + W++  EF  ++++V        PMY L 
Sbjct: 596  FLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLC 655

Query: 505  QKLKLLKERLKPWARKNFSDLHGRVTKAREELYDIQK*LLDNLFNPYLGQNEKAALNKYQ 326
             KL+ LK+ LK +   +FS++  RV  A+ ++   Q+ L     NP L   E+  ++KY 
Sbjct: 656  CKLRKLKQELKLFNMAHFSNISDRVRDAKNKMDKAQQALHTAHENPILCMRERDVVHKYA 715

Query: 325  MLARAEASEIQTKEDSEWMMEGDKCTAFFFNLLKEKRARSGIWTRQDAQGDTVKGQEA-S 149
               RAE S  + K   +W+  GD+ T++F   +  ++ R+ + +     G+ V+ QEA  
Sbjct: 716  STVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRQNRNKLLSLTREDGEVVERQEAVK 775

Query: 148  NMIVEFYKGILG 113
            + ++ ++  +LG
Sbjct: 776  SEVISYFHRVLG 787


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 5/227 (2%)
 Frame = -2

Query: 667 FSNHSPILIE-WNAQSRNTSPFRFKNYWVEQPEF-HIILEEV*KTKIFTNPMYILMQKLK 494
           FS+HS   +   +A  R+  PFRF N+ ++   F  +I  +   T +  + MY +  KLK
Sbjct: 125 FSDHSSCELSLMSASPRSKKPFRFNNFLLKDENFLSLICLKWFSTSVTGSAMYRVSVKLK 184

Query: 493 LLKERLKPWARKNFSDLHGRVTKAREELYDIQK*LLDNLFNPYLGQNEKAALNKYQMLAR 314
            LK+ ++ ++R N+SD+  R  +A + L   Q  LL +   P     E     K+++LA 
Sbjct: 185 ALKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVLLASPC-PSNAAIEAETQRKWRILAE 243

Query: 313 AEASEIQTKEDSEWMMEGDKCTAFFFNLLKEKRARSGIWTRQDAQGDTVKGQE-ASNMIV 137
           AEAS    +    W+ EGD  +++F  +   +++ + I    D  GD ++GQ+   N  V
Sbjct: 244 AEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENHCV 303

Query: 136 EFYKGILGT-KGAEIFYPAFFQN-LSVKATVSDTISLDSEVTDEEIK 2
           E+++  LG+ +G  +F  A   N LS + + +  +SLD+  + E+IK
Sbjct: 304 EYFQSNLGSEQGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIK 350


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 8/235 (3%)
 Frame = -2

Query: 682 FLPHGFSNHSPILIEWNAQSRNTS-PFRFKNYWVEQPEFHIILEEV*KTKIFTNPMYILM 506
           FLP G S+HSP++++     +N   PFRF + W++Q                  PMY L 
Sbjct: 203 FLPSGISDHSPMVVKVIGNDQNIKKPFRFFDMWMDQNSGGC-------------PMYQLC 249

Query: 505 QKLKLLKERLKPWARKNFSDLHGRVTKAREELYDIQK*LLDNLFNPYLGQNEKAALNKYQ 326
             LK LK+ LK +   +FS++  RV  A+ E+   Q+ L     NP L   E+  ++KY 
Sbjct: 250 CNLKKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYA 309

Query: 325 MLARAEASEIQTKEDSEWMMEGDKCTAFFFNLLKEKRARSGIWTRQDAQGDTVKGQEA-S 149
              RAE S  + K   +W+  GD+ T++F   +  +  R+ + +     G+ V+G EA  
Sbjct: 310 STVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVK 369

Query: 148 NMIVEFYKGILGTK------GAEIFYPAFFQNLSVKATVSDTISLDSEVTDEEIK 2
           + ++ ++  +LG          E+   A   NL + +T    ++    VT +EIK
Sbjct: 370 SEVIAYFHRVLGVDQMPRVLNEEVMESAI--NLKLSSTQQHVLA--QVVTRKEIK 420


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 8/235 (3%)
 Frame = -2

Query: 682 FLPHGFSNHSP--ILIEWNAQSRNTSPFRFKNYWVEQPEF-HIILEEV*KTKIFTNPMYI 512
           F P  FS+H+   +++E +   +   PF+F N+ ++ PEF +++ +    T +  + M+ 
Sbjct: 215 FGPPDFSDHASCGVVLELDP-IKAKRPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMFR 273

Query: 511 LMQKLKLLKERLKPWARKNFSDLHGRVTKAREELYDIQK*LLDNLFNPYL--GQNEKAAL 338
           + +KLK LK+ +K ++R N+S+L  R  +A E L   Q   LD   NP L    +E  A 
Sbjct: 274 VSKKLKALKKPIKDFSRLNYSNLEKRTEEAHETLLSFQNLTLD---NPSLENAAHELEAQ 330

Query: 337 NKYQMLARAEASEIQTKEDSEWMMEGDKCTAFFFNLLKEKRARSGIWTRQDAQGDTVKGQ 158
            K+Q+LA AE S  + +    W  EGD  T +F  +   +++ + I T  D  G  +  Q
Sbjct: 331 RKWQILATAEESFFRQRSRVTWFAEGDGNTRYFHRMADSRKSVNTITTLVDDSGTQIDSQ 390

Query: 157 EA-SNMIVEFYKGILGTKGAEIFYPAFFQN--LSVKATVSDTISLDSEVTDEEIK 2
           +  ++    +++ +L              N  L+ +   S    L++  +DE+IK
Sbjct: 391 QGIADHCALYFENLLSDDNDPYSLEQDDMNLLLTYRCPYSQVADLEAMFSDEDIK 445


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
 Frame = -2

Query: 685 EFLPHGFSNHSPILIE-WNAQSRNTSPFRFKNYWVEQPEFHIILEEV*KTKIFTNPMYIL 509
           ++LP G S+HSP+L      + +   PF+F N   EQ EF   +E+   +      +  +
Sbjct: 215 QYLPPGISDHSPLLFNLMTGRPQGGKPFKFMNVMAEQGEFLETVEKAWNSVNGRFKLQAI 274

Query: 508 MQKLKLLKERLKPWARKNFSDLHGRVTKAREELYDIQK*LLDNLFNPYLGQNEKAALNKY 329
              LK +K  LK    +     H +V   R +L D+Q    D   N  +  + K+ +N  
Sbjct: 275 WLNLKAVKRELKQMKTQKIGLAHEKVKNLRHQLQDLQS-QDDFDHNDIMQTDAKSIMNDL 333

Query: 328 QMLARAEASEIQTKEDSEWMMEGDKCTAFFFNLLKEKRARSGIWTRQDAQGDTVK-GQEA 152
           +  +  E S +Q K    W+ +GD  +  FF  +K + A + I       G  ++   E 
Sbjct: 334 RHWSHIEDSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEV 393

Query: 151 SNMIVEFYKGILGTKGAEI 95
              I+EFYK +LGT+ + +
Sbjct: 394 QEEILEFYKKLLGTRASTL 412