BLASTX nr result

ID: Coptis21_contig00019093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019093
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541072.1| PREDICTED: dolichyl-diphosphooligosaccharide...    69   5e-10
ref|XP_002525097.1| dolichyl-diphosphooligosaccharide--protein g...    66   3e-09
gb|AFK46095.1| unknown [Medicago truncatula]                           65   4e-09
gb|AEL99280.1| oligosaccharyltransferase complex subunit beta, p...    65   8e-09
ref|XP_002865052.1| hypothetical protein ARALYDRAFT_920056 [Arab...    65   8e-09

>ref|XP_003541072.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 48 kDa subunit-like [Glycine max]
          Length = 433

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 5/58 (8%)
 Frame = -3

Query: 161 SFSPKK-----ILILLDDFSLKSSHSLYFTSLKNRNYHLDFHLATDSHLKLSQHGEYL 3
           SFSP+K     IL+LLDDF++KSSHSL+F SLK+R + L FHLA D  + L ++G+YL
Sbjct: 18  SFSPEKPSDRRILVLLDDFAIKSSHSLFFNSLKSRGFDLQFHLADDPKIALQRYGQYL 75


>ref|XP_002525097.1| dolichyl-diphosphooligosaccharide--protein glycosyltransferase,
           putative [Ricinus communis] gi|223535556|gb|EEF37224.1|
           dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase, putative [Ricinus communis]
          Length = 432

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 5/58 (8%)
 Frame = -3

Query: 161 SFSP-----KKILILLDDFSLKSSHSLYFTSLKNRNYHLDFHLATDSHLKLSQHGEYL 3
           SFSP     ++IL+LLDDFS KSSHS++F SLK+R + LDF LA D  L + ++G+YL
Sbjct: 26  SFSPESPTDRRILVLLDDFSFKSSHSIFFNSLKSRGFDLDFKLADDPKLAIQRYGQYL 83


>gb|AFK46095.1| unknown [Medicago truncatula]
          Length = 434

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = -3

Query: 155 SPKKILILLDDFSLKSSHSLYFTSLKNRNYHLDFHLATDSHLKLSQHGEYL 3
           S ++IL+LLDDF++KSSHSLYF SL++R + LDF LA D  + L ++G+YL
Sbjct: 26  SDRRILVLLDDFAIKSSHSLYFKSLQSRGFDLDFKLADDPKIALQRYGQYL 76


>gb|AEL99280.1| oligosaccharyltransferase complex subunit beta, partial [Silene
           latifolia] gi|343173157|gb|AEL99281.1|
           oligosaccharyltransferase complex subunit beta, partial
           [Silene latifolia]
          Length = 256

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 5/58 (8%)
 Frame = -3

Query: 161 SFSP-----KKILILLDDFSLKSSHSLYFTSLKNRNYHLDFHLATDSHLKLSQHGEYL 3
           SFSP     ++IL+LLDD ++KSSH +YF SL +R Y LDF L+ DS+L L ++G+YL
Sbjct: 20  SFSPENPSDRRILVLLDDLAIKSSHYIYFNSLSSRGYSLDFKLSDDSNLALKRYGQYL 77


>ref|XP_002865052.1| hypothetical protein ARALYDRAFT_920056 [Arabidopsis lyrata subsp.
           lyrata] gi|297310887|gb|EFH41311.1| hypothetical protein
           ARALYDRAFT_920056 [Arabidopsis lyrata subsp. lyrata]
          Length = 437

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/49 (57%), Positives = 40/49 (81%)
 Frame = -3

Query: 149 KKILILLDDFSLKSSHSLYFTSLKNRNYHLDFHLATDSHLKLSQHGEYL 3
           +++L+LLDD SLKSSHS++F +LK+R + LDF LA DS L L ++G+YL
Sbjct: 31  RRVLVLLDDLSLKSSHSIFFNTLKSRGFDLDFKLAEDSKLALQRYGQYL 79


Top