BLASTX nr result

ID: Coptis21_contig00019087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019087
         (1988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   127   1e-26
ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [R...   123   2e-25
ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|2...   114   7e-23
ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arab...   112   5e-22
ref|XP_003537791.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   109   3e-21

>ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1 [Vitis vinifera]
           gi|296084375|emb|CBI24763.3| unnamed protein product
           [Vitis vinifera]
          Length = 562

 Score =  127 bits (318), Expect = 1e-26
 Identities = 58/88 (65%), Positives = 67/88 (76%)
 Frame = -2

Query: 265 PSTIRRGKHLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVL 86
           P T R  KHLP+INFDHLF+ L   Y +  ENKI C+VHYF+RIC  MP G VSFERKVL
Sbjct: 161 PITNRDAKHLPMINFDHLFSCLYDIYDEKMENKIKCIVHYFERICSQMPTGLVSFERKVL 220

Query: 85  PLHDNCNCVSYPKSDIWSKSTVPLCRFE 2
           PL D+  CV+YPK+D+WSKS VPLC FE
Sbjct: 221 PLEDSPFCVTYPKADLWSKSAVPLCHFE 248


>ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [Ricinus communis]
           gi|223526814|gb|EEF29034.1| poly(ADP-ribose)
           glycohydrolase, putative [Ricinus communis]
          Length = 553

 Score =  123 bits (308), Expect = 2e-25
 Identities = 55/88 (62%), Positives = 66/88 (75%)
 Frame = -2

Query: 265 PSTIRRGKHLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVL 86
           P T R  +HLP+INFDHLF  L  +YS+ QENKI C++HYF+RIC C P G VSFERKVL
Sbjct: 161 PVTGRGVRHLPVINFDHLFEILYDNYSEKQENKIKCIIHYFERICSCTPVGSVSFERKVL 220

Query: 85  PLHDNCNCVSYPKSDIWSKSTVPLCRFE 2
           PL     C+SYPK+D W++S VPLC FE
Sbjct: 221 PLEQLPECISYPKADFWNESAVPLCPFE 248


>ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|222852614|gb|EEE90161.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  114 bits (286), Expect = 7e-23
 Identities = 54/88 (61%), Positives = 62/88 (70%)
 Frame = -2

Query: 265 PSTIRRGKHLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVL 86
           P + R  K LP INFDHLF  +  SYS+ QENKI C++HYF+RICL MP+G VSFERKVL
Sbjct: 162 PVSDRDDKRLPTINFDHLFEDIYSSYSEKQENKIKCIIHYFERICLSMPEGSVSFERKVL 221

Query: 85  PLHDNCNCVSYPKSDIWSKSTVPLCRFE 2
           PL     CV YPK+D W KS V LC  E
Sbjct: 222 PLEQLPLCVFYPKADFWIKSVVSLCTLE 249


>ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arabidopsis lyrata subsp.
           lyrata] gi|297327041|gb|EFH57461.1| hypothetical protein
           ARALYDRAFT_482111 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score =  112 bits (279), Expect = 5e-22
 Identities = 51/88 (57%), Positives = 64/88 (72%)
 Frame = -2

Query: 265 PSTIRRGKHLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVL 86
           P   R  KHLP+INFDHLFASL  SYSQ+QE+KI C++HYF+R C C+P G VSFERK+L
Sbjct: 159 PDDNRGAKHLPVINFDHLFASLYESYSQSQESKIRCIMHYFERFCSCVPIGTVSFERKIL 218

Query: 85  PLHDNCNCVSYPKSDIWSKSTVPLCRFE 2
           P   + +  + P +D WSKS V LC F+
Sbjct: 219 PAEYHNSSTAAPDADFWSKSDVSLCAFK 246


>ref|XP_003537791.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1-like [Glycine max]
          Length = 547

 Score =  109 bits (272), Expect = 3e-21
 Identities = 51/80 (63%), Positives = 60/80 (75%)
 Frame = -2

Query: 241 HLPIINFDHLFASLCPSYSQNQENKILCLVHYFKRICLCMPKGFVSFERKVLPLHDNCNC 62
           HLP+INFD LF SL   YSQ QENKI C+VHYF+RI   MPKG VSFERKVLP  ++   
Sbjct: 171 HLPMINFDVLFGSLYDDYSQKQENKIWCIVHYFQRISSEMPKGIVSFERKVLPFKNDSIH 230

Query: 61  VSYPKSDIWSKSTVPLCRFE 2
           +SYP ++ WS S +PLCRFE
Sbjct: 231 ISYPDANFWSTSAIPLCRFE 250


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