BLASTX nr result

ID: Coptis21_contig00019041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019041
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312648.1| type-b response regulator [Populus trichocar...    59   3e-14
emb|CBM42561.1| putative B-type response regulator 16 [Populus x...    59   5e-14
emb|CBM42560.1| putative B-type response regulator 15 [Populus x...    59   6e-14
ref|XP_002315852.1| type-b response regulator [Populus trichocar...    59   6e-14
ref|XP_002311532.1| type-b response regulator [Populus trichocar...    59   6e-14

>ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
           gi|222852468|gb|EEE90015.1| type-b response regulator
           [Populus trichocarpa]
          Length = 642

 Score = 59.3 bits (142), Expect(2) = 3e-14
 Identities = 28/56 (50%), Positives = 40/56 (71%)
 Frame = -3

Query: 360 ATDALKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVICEFSSLKSTFH 193
           A DAL LL ER+GG+DI+++DV+ P+M GF+LL+ V    ++PVI  F SL   F+
Sbjct: 50  ARDALNLLRERKGGYDIVISDVYMPDMDGFKLLEQVGLEMDLPVISRFFSLTLEFY 105



 Score = 45.8 bits (107), Expect(2) = 3e-14
 Identities = 17/39 (43%), Positives = 27/39 (69%)
 Frame = -1

Query: 125 MMSADDDFSVILKGIEHGACYYLKKPLQIAYFENCWTHL 9
           +MS D + S ++KG++HGAC YL KP+++    N W H+
Sbjct: 143 VMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 181


>emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
          Length = 663

 Score = 58.9 bits (141), Expect(2) = 5e-14
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -3

Query: 363 QATDALKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 226
           QAT ALKLL ER+G FD++L+DVH P+M GF+LL++V    ++PVI
Sbjct: 69  QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114



 Score = 45.8 bits (107), Expect(2) = 5e-14
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = -1

Query: 125 MMSADDDFSVILKGIEHGACYYLKKPLQIAYFENCWTHL 9
           MMSAD   S +++GI+HGAC YL KP++    +N W H+
Sbjct: 115 MMSADGRTSAVMRGIKHGACDYLIKPIREEELKNIWQHV 153


>emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
          Length = 671

 Score = 58.9 bits (141), Expect(2) = 6e-14
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -3

Query: 363 QATDALKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 226
           QAT ALKLL ER+G FD++L+DVH P+M GF+LL++V    ++PVI
Sbjct: 69  QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114



 Score = 45.4 bits (106), Expect(2) = 6e-14
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -1

Query: 125 MMSADDDFSVILKGIEHGACYYLKKPLQIAYFENCWTHL 9
           MMSAD   S +++GI HGAC YL KP++    +N W H+
Sbjct: 115 MMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQHV 153


>ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
           gi|222864892|gb|EEF02023.1| type-b response regulator
           [Populus trichocarpa]
          Length = 663

 Score = 58.9 bits (141), Expect(2) = 6e-14
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -3

Query: 363 QATDALKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 226
           QAT ALKLL ER+G FD++L+DVH P+M GF+LL++V    ++PVI
Sbjct: 69  QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114



 Score = 45.4 bits (106), Expect(2) = 6e-14
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -1

Query: 125 MMSADDDFSVILKGIEHGACYYLKKPLQIAYFENCWTHL 9
           MMSAD   S +++GI HGAC YL KP++    +N W H+
Sbjct: 115 MMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHV 153


>ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
           gi|222851352|gb|EEE88899.1| type-b response regulator
           [Populus trichocarpa]
          Length = 303

 Score = 58.9 bits (141), Expect(2) = 6e-14
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -3

Query: 363 QATDALKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 226
           QAT ALKLL ER+G FD++L+DVH P+M GF+LL++V    ++PVI
Sbjct: 40  QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 85



 Score = 45.4 bits (106), Expect(2) = 6e-14
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -1

Query: 125 MMSADDDFSVILKGIEHGACYYLKKPLQIAYFENCWTHL 9
           MMSAD   S +++GI HGAC YL KP++    +N W H+
Sbjct: 86  MMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQHV 124


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