BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019031
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...   107   2e-21
emb|CBI23315.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...   103   4e-20
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]    99   8e-19
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    99   1e-18

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score =  107 bits (267), Expect = 2e-21
 Identities = 79/225 (35%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
 Frame = +3

Query: 42  LPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGALCLKEVRLSDDVVQKILSGAPLLVEL 221
           LP  L++  S+  LSL +C I     ISW SL  L +  V L DD++++ILSG P L  L
Sbjct: 196 LPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESL 255

Query: 222 TLFFCTGMENLNITSRNLKILHLS-------LTSQSKLSISAPYLRTLEIRGGV--ARYN 374
            L  C G+ +LNITS +LK L ++          +S L ISAP +++L I G +      
Sbjct: 256 ELHHCFGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKECR 315

Query: 375 LMKVSSLSMVKIFPGMAVIGDSHQDKLE-------RLLQSVQHAEYLTLSSHCLQVLYML 533
           +  V SL    +   +A+   + +D  +       +LL+SV H + LT+ + C+QVL + 
Sbjct: 316 VKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQVLSIF 375

Query: 534 EVKGFPTSYSQCSFLELRTDMNKSDFPGIITLLRTCQNLRTLCID 668
           E K   +  S    L L T +NK D PGI  LL++  +L T  I+
Sbjct: 376 EGKDLSSLLSNLKCLILDTHLNKWDLPGIANLLQSSTHLETFVIN 420


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  107 bits (267), Expect = 2e-21
 Identities = 79/225 (35%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
 Frame = +3

Query: 42  LPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGALCLKEVRLSDDVVQKILSGAPLLVEL 221
           LP  L++  S+  LSL +C I     ISW SL  L +  V L DD++++ILSG P L  L
Sbjct: 104 LPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESL 163

Query: 222 TLFFCTGMENLNITSRNLKILHLS-------LTSQSKLSISAPYLRTLEIRGGV--ARYN 374
            L  C G+ +LNITS +LK L ++          +S L ISAP +++L I G +      
Sbjct: 164 ELHHCFGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKECR 223

Query: 375 LMKVSSLSMVKIFPGMAVIGDSHQDKLE-------RLLQSVQHAEYLTLSSHCLQVLYML 533
           +  V SL    +   +A+   + +D  +       +LL+SV H + LT+ + C+QVL + 
Sbjct: 224 VKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQVLSIF 283

Query: 534 EVKGFPTSYSQCSFLELRTDMNKSDFPGIITLLRTCQNLRTLCID 668
           E K   +  S    L L T +NK D PGI  LL++  +L T  I+
Sbjct: 284 EGKDLSSLLSNLKCLILDTHLNKWDLPGIANLLQSSTHLETFVIN 328


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score =  103 bits (256), Expect = 4e-20
 Identities = 77/231 (33%), Positives = 120/231 (51%), Gaps = 20/231 (8%)
 Frame = +3

Query: 36  FKLPSPLFSCDSVKWLSLAYCIIDRDR--QISWNSLGALCLKEVRLSDDVVQKILSGAPL 209
           + LP+ L+S    + LSL +C +  ++  Q+SW SL  L +    LS+++++ I  G  L
Sbjct: 165 YYLPNFLYSNIPAEKLSLRFCALSPNKLKQVSWMSLKVLSISYSWLSNEMIKNIFLGCSL 224

Query: 210 LVELTLFFCTGMENLNIT-SRNLKILHL--SLTSQSK-----LSISAPYLRTLEIRGGVA 365
           L  L L  C G + +N   S +LK L +  S   + K     ++I  P L +L + G + 
Sbjct: 225 LEYLKLNQCCGFDQINTNFSSSLKDLVVDGSWGPEDKFGDFVITIKGPNLLSLTLAGYMH 284

Query: 366 RYNLMKVSSLSMVKIFPGMAVIGDSH----------QDKLERLLQSVQHAEYLTLSSHCL 515
           R N M +   S+V+   G  +   SH          +  L  LL+ +QH E LT+ + CL
Sbjct: 285 RANYMLLDVSSLVEASIGYRMKSCSHGCRSNWYSAHRSVLHDLLEKLQHVEKLTIGTWCL 344

Query: 516 QVLYMLEVKGFPTSYSQCSFLELRTDMNKSDFPGIITLLRTCQNLRTLCID 668
           QVL + EVKG  +  S C +L L   +NK D PGI +LL++  NL+ L I+
Sbjct: 345 QVLSISEVKGLSSPTSACKYLTLNKKINKWDLPGIASLLQSSPNLQKLTIN 395


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 15/226 (6%)
 Frame = +3

Query: 36  FKLPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGALCLKEVRLSDDVVQKILSGAPLLV 215
           + LP  +F   S + L+  +C       +SW  L +L +    L+++ ++ IL G+P L 
Sbjct: 168 YLLPQFIFRHSSFRKLATRFCNFVTYGVVSWAWLKSLSIGYAELNEETIRNILMGSPALE 227

Query: 216 ELTLFFCTGMENLNITSRNLKILHL-------SLTSQSKLSISAPYLRTLEIRGGVARY- 371
            L    C G   +NI S +LK L +           ++ L +SAP +R+LE+ G   +  
Sbjct: 228 CLEFHRCHGFARINICSESLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEKMC 287

Query: 372 NLMKVSSLSMVKIFPGMA-------VIGDSHQDKLERLLQSVQHAEYLTLSSHCLQVLYM 530
            L+ +SSL   K+   M           + + + L  +L+ + H E LT+ + CL+VL +
Sbjct: 288 RLLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLREILKQLSHVENLTVGTWCLEVLSV 347

Query: 531 LEVKGFPTSYSQCSFLELRTDMNKSDFPGIITLLRTCQNLRTLCID 668
           LE+K  P+  S+  +L L T   K D PGI +LL++  +L  L ID
Sbjct: 348 LEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKSSPDLEKLHID 393


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 15/226 (6%)
 Frame = +3

Query: 36  FKLPSPLFSCDSVKWLSLAYCIIDRDRQISWNSLGALCLKEVRLSDDVVQKILSGAPLLV 215
           + LP  +F   S + L+  +C       +SW  L +L +    L+++ ++ IL G+P L 
Sbjct: 168 YLLPQFIFRHSSFRKLATRFCNFVTYGVVSWAWLKSLSIGYAELNEETIRNILMGSPALE 227

Query: 216 ELTLFFCTGMENLNITSRNLKILHL-------SLTSQSKLSISAPYLRTLEIRGGVARY- 371
            L    C G   +NI S +LK L +           ++ L +SAP +R+LE+ G   +  
Sbjct: 228 CLEFHRCHGFARINICSESLKKLSILEPWAPNDAEGETVLEVSAPNIRSLELSGNWEKMC 287

Query: 372 NLMKVSSLSMVKIFPGMA-------VIGDSHQDKLERLLQSVQHAEYLTLSSHCLQVLYM 530
            L+ +SSL   K+   M           + + + L  +L+ + H E LT+ + CL+VL +
Sbjct: 288 RLLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLREILKHLSHVENLTVGTWCLEVLSV 347

Query: 531 LEVKGFPTSYSQCSFLELRTDMNKSDFPGIITLLRTCQNLRTLCID 668
           LE+K  P+  S+  +L L T   K D PGI +LL++  +L  L ID
Sbjct: 348 LEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKSSPDLEKLHID 393



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
 Frame = +3

Query: 303 QSKLSISAPYLRTLEIRGGVARY-NLMKVSSLSMVKIFPGMA-------VIGDSHQDKLE 458
           ++ L +SAP +R+LE+ G   +   L+ +SSL   K+   M           + + + L 
Sbjct: 417 ETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMMHQDRNFQYFSEDYSNMLR 476

Query: 459 RLLQSVQHAEYLTLSSHCLQVLYMLEVKGFPTSYSQCSFLELRTDMNKSDFPGIITLLRT 638
            +L+ + H E LT+ + CL+VL +LE+K  P+  S+  +L L T   K D PGI +LL++
Sbjct: 477 EILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKS 536

Query: 639 CQNLRTLCID 668
             +L  L ID
Sbjct: 537 SPDLEKLHID 546