BLASTX nr result

ID: Coptis21_contig00019028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019028
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155499.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   242   5e-62
ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   242   5e-62
emb|CBI37381.3| unnamed protein product [Vitis vinifera]              236   3e-60
ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   236   3e-60
ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   229   2e-58

>ref|XP_004155499.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 283

 Score =  242 bits (617), Expect = 5e-62
 Identities = 121/209 (57%), Positives = 152/209 (72%)
 Frame = +2

Query: 2   LAHITKMDTDPVTAFARFLLTHHREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHL 181
           LA +    T P+ AFA FL+ HH + + S+    DP LHYP+ ++FAEL + +P LA  L
Sbjct: 5   LASMEDSPTSPLKAFATFLIRHHSDQLRSIAHSPDPKLHYPLFVEFAELMDDDPPLARLL 64

Query: 182 FTNPTDFLPLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPACFVESF 361
           F+ PTD+L +FD AA+ A  I+L D    + N  +K+F+HVRIN++GSPLE P    E+F
Sbjct: 65  FSRPTDYLRVFDDAAVWAHMIILGDSKGSM-NGVKKDFIHVRINVTGSPLEFP----ETF 119

Query: 362 PGIGSVRVKHRGILLTLKATVIRSGTIKMIEGEREYECRKCKHKFKVYPELESGNSIRHP 541
           P IGSVRVKH G+LLTLK TVIRSG IKM EGER Y CRKCKHKF VYPELE+ NSI+ P
Sbjct: 120 PSIGSVRVKHHGVLLTLKGTVIRSGAIKMYEGERWYICRKCKHKFPVYPELETRNSIQLP 179

Query: 542 TSCPSQRSRACEGTSFQFVEGSIVCHDYQ 628
           + CPSQRS+ CEG SF+ +EGS+V HDYQ
Sbjct: 180 SFCPSQRSKPCEGKSFECLEGSVVRHDYQ 208


>ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 649

 Score =  242 bits (617), Expect = 5e-62
 Identities = 121/209 (57%), Positives = 152/209 (72%)
 Frame = +2

Query: 2   LAHITKMDTDPVTAFARFLLTHHREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHL 181
           LA +    T P+ AFA FL+ HH + + S+    DP LHYP+ ++FAEL + +P LA  L
Sbjct: 5   LASMEDSPTSPLKAFATFLIRHHSDQLRSIAHSPDPKLHYPLFVEFAELMDDDPPLARLL 64

Query: 182 FTNPTDFLPLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPACFVESF 361
           F+ PTD+L +FD AA+ A  I+L D    + N  +K+F+HVRIN++GSPLE P    E+F
Sbjct: 65  FSRPTDYLRVFDDAAVWAHMIILGDSKGSM-NGVKKDFIHVRINVTGSPLEFP----ETF 119

Query: 362 PGIGSVRVKHRGILLTLKATVIRSGTIKMIEGEREYECRKCKHKFKVYPELESGNSIRHP 541
           P IGSVRVKH G+LLTLK TVIRSG IKM EGER Y CRKCKHKF VYPELE+ NSI+ P
Sbjct: 120 PSIGSVRVKHHGVLLTLKGTVIRSGAIKMYEGERWYICRKCKHKFPVYPELETRNSIQLP 179

Query: 542 TSCPSQRSRACEGTSFQFVEGSIVCHDYQ 628
           + CPSQRS+ CEG SF+ +EGS+V HDYQ
Sbjct: 180 SFCPSQRSKPCEGKSFECLEGSVVRHDYQ 208


>emb|CBI37381.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  236 bits (601), Expect = 3e-60
 Identities = 124/202 (61%), Positives = 147/202 (72%)
 Frame = +2

Query: 23  DTDPVTAFARFLLTHHREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHLFTNPTDF 202
           D + + A A FLL HH   + S++L +D LLHYP+HI FAEL   +P  AH LF+ P  +
Sbjct: 8   DPESLKALAVFLLRHHSSDLRSIILARDSLLHYPLHIQFAELMNDDPPRAHLLFSQPLQY 67

Query: 203 LPLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPACFVESFPGIGSVR 382
           L LFDSAA  AQ  +L+++  +  NA  KE VHVRINISGSPLE P    E+FP IG VR
Sbjct: 68  LRLFDSAAFLAQRAILEEFGWV--NASVKESVHVRINISGSPLEFP----ETFPSIGRVR 121

Query: 383 VKHRGILLTLKATVIRSGTIKMIEGEREYECRKCKHKFKVYPELESGNSIRHPTSCPSQR 562
           VKH GILLTLK TVIRSG IKMIEGER+YECRKCKH FKVYPELE+ N+I  P+SCPSQ+
Sbjct: 122 VKHHGILLTLKGTVIRSGGIKMIEGERKYECRKCKHIFKVYPELETRNAILLPSSCPSQK 181

Query: 563 SRACEGTSFQFVEGSIVCHDYQ 628
              C GT+FQ VE SI+ HDYQ
Sbjct: 182 ---CAGTNFQLVEDSIIRHDYQ 200


>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
           vinifera]
          Length = 644

 Score =  236 bits (601), Expect = 3e-60
 Identities = 124/202 (61%), Positives = 147/202 (72%)
 Frame = +2

Query: 23  DTDPVTAFARFLLTHHREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHLFTNPTDF 202
           D + + A A FLL HH   + S++L +D LLHYP+HI FAEL   +P  AH LF+ P  +
Sbjct: 8   DPESLKALAVFLLRHHSSDLRSIILARDSLLHYPLHIQFAELMNDDPPRAHLLFSQPLQY 67

Query: 203 LPLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPACFVESFPGIGSVR 382
           L LFDSAA  AQ  +L+++  +  NA  KE VHVRINISGSPLE P    E+FP IG VR
Sbjct: 68  LRLFDSAAFLAQRAILEEFGWV--NASVKESVHVRINISGSPLEFP----ETFPSIGRVR 121

Query: 383 VKHRGILLTLKATVIRSGTIKMIEGEREYECRKCKHKFKVYPELESGNSIRHPTSCPSQR 562
           VKH GILLTLK TVIRSG IKMIEGER+YECRKCKH FKVYPELE+ N+I  P+SCPSQ+
Sbjct: 122 VKHHGILLTLKGTVIRSGGIKMIEGERKYECRKCKHIFKVYPELETRNAILLPSSCPSQK 181

Query: 563 SRACEGTSFQFVEGSIVCHDYQ 628
              C GT+FQ VE SI+ HDYQ
Sbjct: 182 ---CAGTNFQLVEDSIIRHDYQ 200


>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
           gi|223534830|gb|EEF36519.1| Minichromosome maintenance
           protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  229 bits (585), Expect = 2e-58
 Identities = 116/200 (58%), Positives = 141/200 (70%)
 Frame = +2

Query: 29  DPVTAFARFLLTHHREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHLFTNPTDFLP 208
           D V A A FL+ H+   + S+VL  DP LHYP+ I FAEL + NP L+H +F+ PT+FL 
Sbjct: 12  DQVKALAEFLIRHYSSQLRSIVLAADPKLHYPLFIHFAELMDENPLLSHLVFSQPTEFLR 71

Query: 209 LFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPACFVESFPGIGSVRVK 388
            FD AA+ A  IVL++ +        K+F+HVRIN+SGSPLECP    E+FP IG VRVK
Sbjct: 72  HFDKAALWAHKIVLKNLD-FGEKGIEKKFIHVRINVSGSPLECP----ETFPSIGRVRVK 126

Query: 389 HRGILLTLKATVIRSGTIKMIEGEREYECRKCKHKFKVYPELESGNSIRHPTSCPSQRSR 568
           HRGILLTLK TVIRSG IKM EGER Y CRKCK +F VYPELES NSI  P+ CPS RS+
Sbjct: 127 HRGILLTLKGTVIRSGAIKMYEGERMYRCRKCKQEFPVYPELESRNSITLPSFCPSLRSK 186

Query: 569 ACEGTSFQFVEGSIVCHDYQ 628
            CEG  F  V+ +++ HDYQ
Sbjct: 187 PCEGARFDCVDDTVIRHDYQ 206


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