BLASTX nr result
ID: Coptis21_contig00019019
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00019019 (959 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinif... 343 3e-92 gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum] 322 1e-85 ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicu... 317 3e-84 gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum] 315 8e-84 ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicu... 305 1e-80 >ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinifera] gi|297743578|emb|CBI36445.3| unnamed protein product [Vitis vinifera] Length = 279 Score = 343 bits (881), Expect = 3e-92 Identities = 183/279 (65%), Positives = 198/279 (70%), Gaps = 6/279 (2%) Frame = -3 Query: 921 MATTLSLLSLAPFLVSC--LLALFLFPELCFCFHAK--TLSTMAANWSPARATWXXXXXX 754 MA L LSL ++S LLA E C F K LS +W+ A ATW Sbjct: 1 MARALDHLSLFSSVLSFSFLLAFLCCFETCHSFKPKYFNLSRAGTHWASAGATWYGSPEG 60 Query: 753 XXXXXXXXXXGQAVSQSPFSSLITAAGPSLYQSGKECGACYRVKCTN--HPSCSGSPVRV 580 G AVSQ PFSS+IT GPSLY+SGKECGACY+VKCT HPSCSG PVRV Sbjct: 61 AGSDGGSCGYGNAVSQPPFSSMITGIGPSLYKSGKECGACYQVKCTKRMHPSCSGRPVRV 120 Query: 579 VITDSCPGGPCASDSAHFDLSGTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTIT 400 VITD CPGGPCAS SAHFDLSGTAFGAMA GQEE+LR GVL+I YARVACDYSG TI Sbjct: 121 VITDFCPGGPCASQSAHFDLSGTAFGAMAIPGQEEKLRNVGVLEIRYARVACDYSGKTIA 180 Query: 399 FRVDAGSNSNYFAVVVEFEEGDGDLAGVALREESNESMAWREMQQSWGVVWKLDAGSELH 220 F VD G+N N F+V+VEFEEGDGDLAGVAL+E S WR MQQSWG VWKLDAG EL Sbjct: 181 FHVDLGANPNSFSVLVEFEEGDGDLAGVALKETLKGSGKWRAMQQSWGAVWKLDAGYELK 240 Query: 219 APFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNFL 103 PFSI+L SQYSGQTLVA NVIP GWKPG TYRSLVN+L Sbjct: 241 PPFSIQLTSQYSGQTLVAKNVIPDGWKPGSTYRSLVNYL 279 >gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum] Length = 279 Score = 322 bits (824), Expect = 1e-85 Identities = 164/260 (63%), Positives = 186/260 (71%), Gaps = 5/260 (1%) Frame = -3 Query: 870 LLALFLFPELCFCFHAKTLSTMAANWSPARATWXXXXXXXXXXXXXXXXGQAVSQSPFSS 691 +L F+ P + LST A +W A ATW G AVSQ+PFSS Sbjct: 18 VLVCFICPSFGYKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSQAPFSS 77 Query: 690 LITAAGPSLYQSGKECGACYRVKCTN--HPSCSGSPVRVVITDSCPGGPCASDSAHFDLS 517 +T GPSLY+SGKECGACY+VKCT H SCSG VRVVITD CPGGPC + SAHFDLS Sbjct: 78 FVTGIGPSLYKSGKECGACYQVKCTKKMHGSCSGKGVRVVITDFCPGGPCVAQSAHFDLS 137 Query: 516 GTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEG 337 GTAFG+MA GQE++LR AGVL I YARVACDYS I F VD GSNS YFAVV+EFEEG Sbjct: 138 GTAFGSMAIPGQEQKLRDAGVLQIRYARVACDYSRKNIVFHVDQGSNSEYFAVVIEFEEG 197 Query: 336 DGDLAGVALREESN---ESMAWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVA 166 DGDLA V L+E+ + ++ WR+MQQSWG VWKLDAGSELH PFSIRL SQYS Q L+A Sbjct: 198 DGDLAKVELKEKISSITKNSKWRQMQQSWGAVWKLDAGSELHPPFSIRLTSQYSDQILIA 257 Query: 165 TNVIPQGWKPGGTYRSLVNF 106 NVIP GW+PG TYRSLVN+ Sbjct: 258 KNVIPTGWQPGATYRSLVNY 277 >ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicum] gi|81367673|gb|ABB71677.1| beta expansin precursor [Solanum lycopersicum] Length = 285 Score = 317 bits (811), Expect = 3e-84 Identities = 162/266 (60%), Positives = 185/266 (69%), Gaps = 11/266 (4%) Frame = -3 Query: 870 LLALFLFPELCFCFHAKTLSTMAANWSPARATWXXXXXXXXXXXXXXXXGQAVSQSPFSS 691 +L F+ P + LST A +W A ATW G AVS++P SS Sbjct: 18 VLVCFICPSFGYKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSEAPLSS 77 Query: 690 LITAAGPSLYQSGKECGACYRVKCTN--HPSCSGSPVRVVITDSCPGGPCASDSAHFDLS 517 +T GPSLY+SGKECGACY+VKCT H SCSG VRVVITD CPGGPC + SAHFDLS Sbjct: 78 FVTGIGPSLYKSGKECGACYQVKCTKKMHRSCSGKGVRVVITDFCPGGPCVAQSAHFDLS 137 Query: 516 GTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEG 337 GTAFGAMA GQE++LR AGVL I YARVACDYS I F VD GSNS YFAVV+EFE+G Sbjct: 138 GTAFGAMAIPGQEQKLRDAGVLQIRYARVACDYSRKNIVFHVDQGSNSEYFAVVIEFEQG 197 Query: 336 DGDLAGVALREESNESM---------AWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYS 184 DGDLA V L+E+ + S+ WR+MQQSWG VWKLDAGS+LH PFSIRL SQYS Sbjct: 198 DGDLAKVELKEKRSSSIISRGNKNNYKWRQMQQSWGAVWKLDAGSKLHPPFSIRLTSQYS 257 Query: 183 GQTLVATNVIPQGWKPGGTYRSLVNF 106 Q L+A NVIP GW+PG TYRSLVN+ Sbjct: 258 DQILIANNVIPTGWQPGATYRSLVNY 283 >gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum] Length = 276 Score = 315 bits (808), Expect = 8e-84 Identities = 159/278 (57%), Positives = 198/278 (71%), Gaps = 6/278 (2%) Frame = -3 Query: 921 MATTLSLLSLAPFLVSCLLALFLFPEL-CFCFHAKTLSTMA-----ANWSPARATWXXXX 760 M+TTL ++L PF + LF + C CFH K L+ ++ ++WSPA ATW Sbjct: 1 MSTTL--MALKPFTIFTYFTLFSILTISCSCFHPKRLNNVSKIQSNSDWSPAGATWYGSP 58 Query: 759 XXXXXXXXXXXXGQAVSQSPFSSLITAAGPSLYQSGKECGACYRVKCTNHPSCSGSPVRV 580 AV Q PFSSLI AAGPSL++SGK CGACY+VKCT + +CSG PVRV Sbjct: 59 SGAGSDGGACGYTNAVDQPPFSSLIAAAGPSLFKSGKGCGACYQVKCTGNKACSGKPVRV 118 Query: 579 VITDSCPGGPCASDSAHFDLSGTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTIT 400 VITDSCPGGPC S+SAHFDLSGT+FGAMA GQ +QLR AGVL + Y RV C+Y G +T Sbjct: 119 VITDSCPGGPCLSESAHFDLSGTSFGAMAISGQADQLRNAGVLQVQYKRVECNYPGVKLT 178 Query: 399 FRVDAGSNSNYFAVVVEFEEGDGDLAGVALREESNESMAWREMQQSWGVVWKLDAGSELH 220 F VD+GSNSNYFA +VE+E+GDGDL V L+ ++ +S +W+ MQQSWG VWKLD+GS L Sbjct: 179 FHVDSGSNSNYFAALVEYEDGDGDLNRVDLK-QALDSESWQPMQQSWGAVWKLDSGSSLV 237 Query: 219 APFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNF 106 APFS++L + SGQT+VA VIP GW+PG TYRS++NF Sbjct: 238 APFSLKLTGE-SGQTVVANGVIPAGWQPGKTYRSVINF 274 >ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicum] gi|82569705|gb|ABB83474.1| beta-expansin precursor [Solanum lycopersicum] Length = 275 Score = 305 bits (781), Expect = 1e-80 Identities = 156/277 (56%), Positives = 191/277 (68%), Gaps = 5/277 (1%) Frame = -3 Query: 921 MATTLSLLSLAPFLVSCLLALF-LFPELCFCFHAKTLSTMA----ANWSPARATWXXXXX 757 M+TT ++L P +V F L C C H K + ++WSP ATW Sbjct: 1 MSTTF--MALNPSIVFTYFTTFSLLTITCSCLHPKRFNVSKVQSNSDWSPPGATWYGSPS 58 Query: 756 XXXXXXXXXXXGQAVSQSPFSSLITAAGPSLYQSGKECGACYRVKCTNHPSCSGSPVRVV 577 AV Q PFSSLI AAGPSL++SGK CGACY+VKCT + +CSG PVRVV Sbjct: 59 GAGSDGGACGYTNAVDQPPFSSLIAAAGPSLFKSGKGCGACYQVKCTGNKACSGKPVRVV 118 Query: 576 ITDSCPGGPCASDSAHFDLSGTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTITF 397 ITDSCPGGPC S+SAHFDLSGT+FGAMA GQ +QLR AGV+ I Y RV C+Y G +TF Sbjct: 119 ITDSCPGGPCLSESAHFDLSGTSFGAMAISGQADQLRNAGVIQIQYKRVECNYPGVKLTF 178 Query: 396 RVDAGSNSNYFAVVVEFEEGDGDLAGVALREESNESMAWREMQQSWGVVWKLDAGSELHA 217 VD+GSNSNYFA +VE+E+GDGDL V L+ ++ +S +W+ MQQSWG VWKLD+GS L A Sbjct: 179 HVDSGSNSNYFAALVEYEDGDGDLNSVDLK-QALDSESWQPMQQSWGAVWKLDSGSSLVA 237 Query: 216 PFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNF 106 PFS++L + SGQT+VA VIP GW+PG TYRS+VNF Sbjct: 238 PFSLKLTGE-SGQTVVANGVIPAGWQPGKTYRSVVNF 273