BLASTX nr result

ID: Coptis21_contig00019019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019019
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinif...   343   3e-92
gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]          322   1e-85
ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicu...   317   3e-84
gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum]          315   8e-84
ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicu...   305   1e-80

>ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297743578|emb|CBI36445.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  343 bits (881), Expect = 3e-92
 Identities = 183/279 (65%), Positives = 198/279 (70%), Gaps = 6/279 (2%)
 Frame = -3

Query: 921 MATTLSLLSLAPFLVSC--LLALFLFPELCFCFHAK--TLSTMAANWSPARATWXXXXXX 754
           MA  L  LSL   ++S   LLA     E C  F  K   LS    +W+ A ATW      
Sbjct: 1   MARALDHLSLFSSVLSFSFLLAFLCCFETCHSFKPKYFNLSRAGTHWASAGATWYGSPEG 60

Query: 753 XXXXXXXXXXGQAVSQSPFSSLITAAGPSLYQSGKECGACYRVKCTN--HPSCSGSPVRV 580
                     G AVSQ PFSS+IT  GPSLY+SGKECGACY+VKCT   HPSCSG PVRV
Sbjct: 61  AGSDGGSCGYGNAVSQPPFSSMITGIGPSLYKSGKECGACYQVKCTKRMHPSCSGRPVRV 120

Query: 579 VITDSCPGGPCASDSAHFDLSGTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTIT 400
           VITD CPGGPCAS SAHFDLSGTAFGAMA  GQEE+LR  GVL+I YARVACDYSG TI 
Sbjct: 121 VITDFCPGGPCASQSAHFDLSGTAFGAMAIPGQEEKLRNVGVLEIRYARVACDYSGKTIA 180

Query: 399 FRVDAGSNSNYFAVVVEFEEGDGDLAGVALREESNESMAWREMQQSWGVVWKLDAGSELH 220
           F VD G+N N F+V+VEFEEGDGDLAGVAL+E    S  WR MQQSWG VWKLDAG EL 
Sbjct: 181 FHVDLGANPNSFSVLVEFEEGDGDLAGVALKETLKGSGKWRAMQQSWGAVWKLDAGYELK 240

Query: 219 APFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNFL 103
            PFSI+L SQYSGQTLVA NVIP GWKPG TYRSLVN+L
Sbjct: 241 PPFSIQLTSQYSGQTLVAKNVIPDGWKPGSTYRSLVNYL 279


>gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]
          Length = 279

 Score =  322 bits (824), Expect = 1e-85
 Identities = 164/260 (63%), Positives = 186/260 (71%), Gaps = 5/260 (1%)
 Frame = -3

Query: 870 LLALFLFPELCFCFHAKTLSTMAANWSPARATWXXXXXXXXXXXXXXXXGQAVSQSPFSS 691
           +L  F+ P   +      LST A +W  A ATW                G AVSQ+PFSS
Sbjct: 18  VLVCFICPSFGYKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSQAPFSS 77

Query: 690 LITAAGPSLYQSGKECGACYRVKCTN--HPSCSGSPVRVVITDSCPGGPCASDSAHFDLS 517
            +T  GPSLY+SGKECGACY+VKCT   H SCSG  VRVVITD CPGGPC + SAHFDLS
Sbjct: 78  FVTGIGPSLYKSGKECGACYQVKCTKKMHGSCSGKGVRVVITDFCPGGPCVAQSAHFDLS 137

Query: 516 GTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEG 337
           GTAFG+MA  GQE++LR AGVL I YARVACDYS   I F VD GSNS YFAVV+EFEEG
Sbjct: 138 GTAFGSMAIPGQEQKLRDAGVLQIRYARVACDYSRKNIVFHVDQGSNSEYFAVVIEFEEG 197

Query: 336 DGDLAGVALREESN---ESMAWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVA 166
           DGDLA V L+E+ +   ++  WR+MQQSWG VWKLDAGSELH PFSIRL SQYS Q L+A
Sbjct: 198 DGDLAKVELKEKISSITKNSKWRQMQQSWGAVWKLDAGSELHPPFSIRLTSQYSDQILIA 257

Query: 165 TNVIPQGWKPGGTYRSLVNF 106
            NVIP GW+PG TYRSLVN+
Sbjct: 258 KNVIPTGWQPGATYRSLVNY 277


>ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicum]
           gi|81367673|gb|ABB71677.1| beta expansin precursor
           [Solanum lycopersicum]
          Length = 285

 Score =  317 bits (811), Expect = 3e-84
 Identities = 162/266 (60%), Positives = 185/266 (69%), Gaps = 11/266 (4%)
 Frame = -3

Query: 870 LLALFLFPELCFCFHAKTLSTMAANWSPARATWXXXXXXXXXXXXXXXXGQAVSQSPFSS 691
           +L  F+ P   +      LST A +W  A ATW                G AVS++P SS
Sbjct: 18  VLVCFICPSFGYKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSEAPLSS 77

Query: 690 LITAAGPSLYQSGKECGACYRVKCTN--HPSCSGSPVRVVITDSCPGGPCASDSAHFDLS 517
            +T  GPSLY+SGKECGACY+VKCT   H SCSG  VRVVITD CPGGPC + SAHFDLS
Sbjct: 78  FVTGIGPSLYKSGKECGACYQVKCTKKMHRSCSGKGVRVVITDFCPGGPCVAQSAHFDLS 137

Query: 516 GTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEG 337
           GTAFGAMA  GQE++LR AGVL I YARVACDYS   I F VD GSNS YFAVV+EFE+G
Sbjct: 138 GTAFGAMAIPGQEQKLRDAGVLQIRYARVACDYSRKNIVFHVDQGSNSEYFAVVIEFEQG 197

Query: 336 DGDLAGVALREESNESM---------AWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYS 184
           DGDLA V L+E+ + S+          WR+MQQSWG VWKLDAGS+LH PFSIRL SQYS
Sbjct: 198 DGDLAKVELKEKRSSSIISRGNKNNYKWRQMQQSWGAVWKLDAGSKLHPPFSIRLTSQYS 257

Query: 183 GQTLVATNVIPQGWKPGGTYRSLVNF 106
            Q L+A NVIP GW+PG TYRSLVN+
Sbjct: 258 DQILIANNVIPTGWQPGATYRSLVNY 283


>gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum]
          Length = 276

 Score =  315 bits (808), Expect = 8e-84
 Identities = 159/278 (57%), Positives = 198/278 (71%), Gaps = 6/278 (2%)
 Frame = -3

Query: 921 MATTLSLLSLAPFLVSCLLALFLFPEL-CFCFHAKTLSTMA-----ANWSPARATWXXXX 760
           M+TTL  ++L PF +     LF    + C CFH K L+ ++     ++WSPA ATW    
Sbjct: 1   MSTTL--MALKPFTIFTYFTLFSILTISCSCFHPKRLNNVSKIQSNSDWSPAGATWYGSP 58

Query: 759 XXXXXXXXXXXXGQAVSQSPFSSLITAAGPSLYQSGKECGACYRVKCTNHPSCSGSPVRV 580
                         AV Q PFSSLI AAGPSL++SGK CGACY+VKCT + +CSG PVRV
Sbjct: 59  SGAGSDGGACGYTNAVDQPPFSSLIAAAGPSLFKSGKGCGACYQVKCTGNKACSGKPVRV 118

Query: 579 VITDSCPGGPCASDSAHFDLSGTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTIT 400
           VITDSCPGGPC S+SAHFDLSGT+FGAMA  GQ +QLR AGVL + Y RV C+Y G  +T
Sbjct: 119 VITDSCPGGPCLSESAHFDLSGTSFGAMAISGQADQLRNAGVLQVQYKRVECNYPGVKLT 178

Query: 399 FRVDAGSNSNYFAVVVEFEEGDGDLAGVALREESNESMAWREMQQSWGVVWKLDAGSELH 220
           F VD+GSNSNYFA +VE+E+GDGDL  V L+ ++ +S +W+ MQQSWG VWKLD+GS L 
Sbjct: 179 FHVDSGSNSNYFAALVEYEDGDGDLNRVDLK-QALDSESWQPMQQSWGAVWKLDSGSSLV 237

Query: 219 APFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNF 106
           APFS++L  + SGQT+VA  VIP GW+PG TYRS++NF
Sbjct: 238 APFSLKLTGE-SGQTVVANGVIPAGWQPGKTYRSVINF 274


>ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicum]
           gi|82569705|gb|ABB83474.1| beta-expansin precursor
           [Solanum lycopersicum]
          Length = 275

 Score =  305 bits (781), Expect = 1e-80
 Identities = 156/277 (56%), Positives = 191/277 (68%), Gaps = 5/277 (1%)
 Frame = -3

Query: 921 MATTLSLLSLAPFLVSCLLALF-LFPELCFCFHAKTLSTMA----ANWSPARATWXXXXX 757
           M+TT   ++L P +V      F L    C C H K  +       ++WSP  ATW     
Sbjct: 1   MSTTF--MALNPSIVFTYFTTFSLLTITCSCLHPKRFNVSKVQSNSDWSPPGATWYGSPS 58

Query: 756 XXXXXXXXXXXGQAVSQSPFSSLITAAGPSLYQSGKECGACYRVKCTNHPSCSGSPVRVV 577
                        AV Q PFSSLI AAGPSL++SGK CGACY+VKCT + +CSG PVRVV
Sbjct: 59  GAGSDGGACGYTNAVDQPPFSSLIAAAGPSLFKSGKGCGACYQVKCTGNKACSGKPVRVV 118

Query: 576 ITDSCPGGPCASDSAHFDLSGTAFGAMARHGQEEQLRGAGVLDISYARVACDYSGTTITF 397
           ITDSCPGGPC S+SAHFDLSGT+FGAMA  GQ +QLR AGV+ I Y RV C+Y G  +TF
Sbjct: 119 ITDSCPGGPCLSESAHFDLSGTSFGAMAISGQADQLRNAGVIQIQYKRVECNYPGVKLTF 178

Query: 396 RVDAGSNSNYFAVVVEFEEGDGDLAGVALREESNESMAWREMQQSWGVVWKLDAGSELHA 217
            VD+GSNSNYFA +VE+E+GDGDL  V L+ ++ +S +W+ MQQSWG VWKLD+GS L A
Sbjct: 179 HVDSGSNSNYFAALVEYEDGDGDLNSVDLK-QALDSESWQPMQQSWGAVWKLDSGSSLVA 237

Query: 216 PFSIRLKSQYSGQTLVATNVIPQGWKPGGTYRSLVNF 106
           PFS++L  + SGQT+VA  VIP GW+PG TYRS+VNF
Sbjct: 238 PFSLKLTGE-SGQTVVANGVIPAGWQPGKTYRSVVNF 273


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