BLASTX nr result

ID: Coptis21_contig00019014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019014
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553871.1| PREDICTED: protein SAMHD1 homolog [Glycine max]   102   3e-36
ref|XP_003542695.1| PREDICTED: protein SAMHD1 homolog [Glycine max]   102   8e-36
ref|XP_004141086.1| PREDICTED: protein SAMHD1 homolog [Cucumis s...    97   1e-35
gb|AFK42948.1| unknown [Medicago truncatula]                           94   5e-34
ref|XP_002278629.1| PREDICTED: protein SAMHD1 homolog [Vitis vin...    91   6e-33

>ref|XP_003553871.1| PREDICTED: protein SAMHD1 homolog [Glycine max]
          Length = 474

 Score =  102 bits (254), Expect(2) = 3e-36
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = -3

Query: 367 QKASGVTLNEEDVAVCNVKIDLTRGRSNPLESIKFFKDYESGDKFSVSNDRISHLLPTSY 188
           QK+ GVTL EEDVA+CNVKIDLTRG+ NPLESI FFKDYES +KF++ +DRISHLLPTSY
Sbjct: 365 QKSGGVTLKEEDVAICNVKIDLTRGKHNPLESIHFFKDYESDEKFTIPDDRISHLLPTSY 424



 Score = 74.7 bits (182), Expect(2) = 3e-36
 Identities = 36/51 (70%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = -1

Query: 195 HLI-TCCQHMIVRVYSKKPKLVEAISEAFENFQLKTYGVKAQVHEAPETKK 46
           HL+ T  Q MIV+VY+KKP+LVEAISEAFENFQLKTYG+KAQ H  P+ K+
Sbjct: 418 HLLPTSYQDMIVKVYAKKPELVEAISEAFENFQLKTYGIKAQAHSTPQKKR 468


>ref|XP_003542695.1| PREDICTED: protein SAMHD1 homolog [Glycine max]
          Length = 474

 Score =  102 bits (254), Expect(2) = 8e-36
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = -3

Query: 367 QKASGVTLNEEDVAVCNVKIDLTRGRSNPLESIKFFKDYESGDKFSVSNDRISHLLPTSY 188
           QK+ GVTL EEDVAVCNVKIDLTRG+ NPLESI FFKDYES +KF++ +DR+SHLLPTSY
Sbjct: 365 QKSGGVTLKEEDVAVCNVKIDLTRGKHNPLESIHFFKDYESDEKFTIPDDRVSHLLPTSY 424



 Score = 73.2 bits (178), Expect(2) = 8e-36
 Identities = 35/51 (68%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = -1

Query: 195 HLI-TCCQHMIVRVYSKKPKLVEAISEAFENFQLKTYGVKAQVHEAPETKK 46
           HL+ T  Q MIV+VY+KKP+LVEAISEAFENFQLKTYG+K Q H  P+ K+
Sbjct: 418 HLLPTSYQDMIVKVYAKKPELVEAISEAFENFQLKTYGIKTQAHSTPQKKR 468


>ref|XP_004141086.1| PREDICTED: protein SAMHD1 homolog [Cucumis sativus]
          Length = 471

 Score = 97.4 bits (241), Expect(2) = 1e-35
 Identities = 47/60 (78%), Positives = 50/60 (83%)
 Frame = -3

Query: 367 QKASGVTLNEEDVAVCNVKIDLTRGRSNPLESIKFFKDYESGDKFSVSNDRISHLLPTSY 188
           QK  GV L EEDVAV NV+IDLTRGR NPLE I FFKDYES DKF +S+DRISHLLPTSY
Sbjct: 365 QKNGGVQLKEEDVAVSNVRIDLTRGRKNPLERIHFFKDYESNDKFKISDDRISHLLPTSY 424



 Score = 77.8 bits (190), Expect(2) = 1e-35
 Identities = 39/51 (76%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = -1

Query: 195 HLI-TCCQHMIVRVYSKKPKLVEAISEAFENFQLKTYGVKAQVHEAPETKK 46
           HL+ T  Q MIVRVYSKKP+LVEAISEAFENFQLKTYG+K QVH  P+ KK
Sbjct: 418 HLLPTSYQDMIVRVYSKKPELVEAISEAFENFQLKTYGIKTQVHATPDKKK 468


>gb|AFK42948.1| unknown [Medicago truncatula]
          Length = 124

 Score = 94.4 bits (233), Expect(2) = 5e-34
 Identities = 44/60 (73%), Positives = 51/60 (85%)
 Frame = -3

Query: 367 QKASGVTLNEEDVAVCNVKIDLTRGRSNPLESIKFFKDYESGDKFSVSNDRISHLLPTSY 188
           QK  GV L EEDVAVCNVKIDLTRG+ NPLESI FFKDYES +KF++ ++RISHLLP S+
Sbjct: 16  QKNGGVMLKEEDVAVCNVKIDLTRGKHNPLESIHFFKDYESDEKFTIPDERISHLLPASF 75



 Score = 75.1 bits (183), Expect(2) = 5e-34
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -1

Query: 177 QHMIVRVYSKKPKLVEAISEAFENFQLKTYGVKAQVHEAPETKK 46
           Q MIVRVYSKKP+LVE ISEAFEN+QLKTYG+KAQVH  P+ KK
Sbjct: 76  QDMIVRVYSKKPELVEKISEAFENYQLKTYGIKAQVHSTPDKKK 119


>ref|XP_002278629.1| PREDICTED: protein SAMHD1 homolog [Vitis vinifera]
           gi|296087679|emb|CBI34935.3| unnamed protein product
           [Vitis vinifera]
          Length = 467

 Score = 91.3 bits (225), Expect(2) = 6e-33
 Identities = 42/57 (73%), Positives = 50/57 (87%)
 Frame = -3

Query: 358 SGVTLNEEDVAVCNVKIDLTRGRSNPLESIKFFKDYESGDKFSVSNDRISHLLPTSY 188
           +G  L EEDV V NVKIDLTRG+ NPLES++FF+DYES +KFS+S+DRISHLLPTSY
Sbjct: 364 NGAILREEDVVVDNVKIDLTRGKHNPLESVRFFQDYESDEKFSISDDRISHLLPTSY 420



 Score = 74.7 bits (182), Expect(2) = 6e-33
 Identities = 38/50 (76%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
 Frame = -1

Query: 195 HLI-TCCQHMIVRVYSKKPKLVEAISEAFENFQLKTYGVKAQVHEAPETK 49
           HL+ T  Q MIVRVYSKKP+LV AISEAFENFQ+KTYG+KAQVH  PE K
Sbjct: 414 HLLPTSYQDMIVRVYSKKPELVGAISEAFENFQVKTYGIKAQVHATPEKK 463


Top