BLASTX nr result

ID: Coptis21_contig00019010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019010
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272923.1| PREDICTED: formimidoyltransferase-cyclodeami...   103   9e-41
ref|XP_002319919.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-39
emb|CBI28922.3| unnamed protein product [Vitis vinifera]               99   2e-39
ref|XP_002517979.1| formiminotransferase-cyclodeaminase, putativ...    97   1e-37
gb|AFK43329.1| unknown [Lotus japonicus]                               90   1e-35

>ref|XP_002272923.1| PREDICTED: formimidoyltransferase-cyclodeaminase-like [Vitis
           vinifera]
          Length = 455

 Score =  103 bits (256), Expect(2) = 9e-41
 Identities = 51/84 (60%), Positives = 67/84 (79%)
 Frame = +1

Query: 73  ERGKR*MLRGMLACCKLYISESQNKLALSSIEQAAKPYPRVAILNKFQDEAYNRVGYTLV 252
           E G+R ML+ MLACCK+YISES+N+ AL  IE+AA+ +P   I+NKF+DE YNRVGYTLV
Sbjct: 150 EEGER-MLKLMLACCKVYISESRNRAALELIERAARLFPEAPIINKFEDETYNRVGYTLV 208

Query: 253 SEFSPTQLQDSSSLRGAVVSMVKA 324
           S+ +P    D+ +LRGAV++MVKA
Sbjct: 209 SKLAPKPSSDTCALRGAVLAMVKA 232



 Score = 89.0 bits (219), Expect(2) = 9e-41
 Identities = 39/49 (79%), Positives = 43/49 (87%)
 Frame = +2

Query: 368 HCGTHPRLGIVDHICFHPLAQTSLDQAAWLARSVAADIGSNLQVPTFLY 514
           HCG HPRLG+VDHICFHPLA  SL Q A +A+S+AADIGSNLQVPTFLY
Sbjct: 242 HCGNHPRLGVVDHICFHPLADASLKQTAGIAKSLAADIGSNLQVPTFLY 290


>ref|XP_002319919.1| predicted protein [Populus trichocarpa] gi|222858295|gb|EEE95842.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 98.2 bits (243), Expect(2) = 1e-39
 Identities = 47/74 (63%), Positives = 59/74 (79%)
 Frame = +1

Query: 103 MLACCKLYISESQNKLALSSIEQAAKPYPRVAILNKFQDEAYNRVGYTLVSEFSPTQLQD 282
           MLACCK+YISES+NK+AL SIE+AAK +P   I+NKF+D  YNRVGYTLVS  +P    D
Sbjct: 1   MLACCKVYISESRNKVALESIERAAKLFPEAPIVNKFEDVTYNRVGYTLVSSLAPKPSLD 60

Query: 283 SSSLRGAVVSMVKA 324
           S +L+G V++MVKA
Sbjct: 61  SCALKGVVLAMVKA 74



 Score = 90.5 bits (223), Expect(2) = 1e-39
 Identities = 39/49 (79%), Positives = 46/49 (93%)
 Frame = +2

Query: 368 HCGTHPRLGIVDHICFHPLAQTSLDQAAWLARSVAADIGSNLQVPTFLY 514
           HCG+HPRLG+VDHICFHPLAQ+SLDQAA +A+S+A D GS+LQVPTFLY
Sbjct: 84  HCGSHPRLGVVDHICFHPLAQSSLDQAAGIAKSLAVDAGSSLQVPTFLY 132


>emb|CBI28922.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 98.6 bits (244), Expect(2) = 2e-39
 Identities = 46/74 (62%), Positives = 60/74 (81%)
 Frame = +1

Query: 103 MLACCKLYISESQNKLALSSIEQAAKPYPRVAILNKFQDEAYNRVGYTLVSEFSPTQLQD 282
           MLACCK+YISES+N+ AL  IE+AA+ +P   I+NKF+DE YNRVGYTLVS+ +P    D
Sbjct: 1   MLACCKVYISESRNRAALELIERAARLFPEAPIINKFEDETYNRVGYTLVSKLAPKPSSD 60

Query: 283 SSSLRGAVVSMVKA 324
           + +LRGAV++MVKA
Sbjct: 61  TCALRGAVLAMVKA 74



 Score = 89.0 bits (219), Expect(2) = 2e-39
 Identities = 39/49 (79%), Positives = 43/49 (87%)
 Frame = +2

Query: 368 HCGTHPRLGIVDHICFHPLAQTSLDQAAWLARSVAADIGSNLQVPTFLY 514
           HCG HPRLG+VDHICFHPLA  SL Q A +A+S+AADIGSNLQVPTFLY
Sbjct: 84  HCGNHPRLGVVDHICFHPLADASLKQTAGIAKSLAADIGSNLQVPTFLY 132


>ref|XP_002517979.1| formiminotransferase-cyclodeaminase, putative [Ricinus communis]
           gi|223542961|gb|EEF44497.1|
           formiminotransferase-cyclodeaminase, putative [Ricinus
           communis]
          Length = 299

 Score = 97.4 bits (241), Expect(2) = 1e-37
 Identities = 47/78 (60%), Positives = 61/78 (78%)
 Frame = +1

Query: 91  MLRGMLACCKLYISESQNKLALSSIEQAAKPYPRVAILNKFQDEAYNRVGYTLVSEFSPT 270
           ML+  LACCK+YISE++NK AL+SIE+AAK +P+  I+N+F+D  YNRVGYTLVS  +P 
Sbjct: 1   MLKWTLACCKVYISETRNKAALASIEKAAKLFPQAPIINRFEDATYNRVGYTLVSSLAPK 60

Query: 271 QLQDSSSLRGAVVSMVKA 324
               S SLR AV++MVKA
Sbjct: 61  PSSGSCSLRSAVLAMVKA 78



 Score = 84.0 bits (206), Expect(2) = 1e-37
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = +2

Query: 368 HCGTHPRLGIVDHICFHPLAQTSLDQAAWLARSVAADIGSNLQVPTFLY 514
           H G+HPRLG+VDHICFHPLA+ SLDQ A +A+S+A D+GS LQVPTFLY
Sbjct: 88  HSGSHPRLGVVDHICFHPLARASLDQVAEIAKSLAVDVGSGLQVPTFLY 136


>gb|AFK43329.1| unknown [Lotus japonicus]
          Length = 303

 Score = 90.1 bits (222), Expect(2) = 1e-35
 Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
 Frame = +1

Query: 91  MLRGMLACCKLYISESQNKLALSSIEQAAKPYPRVAILNKFQDEAYNRVGYTLVS--EFS 264
           ML+ +L CCK+YISES+N+ AL SIE+AAK +P   I+NKF+D AYNRVGYTLVS  +  
Sbjct: 1   MLKSILGCCKVYISESRNRSALESIEKAAKLFPLAPIVNKFEDVAYNRVGYTLVSQLDLD 60

Query: 265 PTQLQDSSSLRGAVVSMVKA 324
           P Q      L+ AV++MVKA
Sbjct: 61  PVQSTGPCHLKNAVLAMVKA 80



 Score = 84.7 bits (208), Expect(2) = 1e-35
 Identities = 38/49 (77%), Positives = 43/49 (87%)
 Frame = +2

Query: 368 HCGTHPRLGIVDHICFHPLAQTSLDQAAWLARSVAADIGSNLQVPTFLY 514
           H GTHPRLG+VDHICFHPLA+ SL+QAA  AR +A D+GSNLQVPTFLY
Sbjct: 90  HTGTHPRLGVVDHICFHPLAEASLNQAASTARCLAMDMGSNLQVPTFLY 138


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